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The map label for this gene is ydgM [C]

Identifier: 170757405

GI number: 170757405

Start: 1503296

End: 1504573

Strand: Reverse

Name: ydgM [C]

Synonym: CLD_3195

Alternate gene names: 170757405

Gene position: 1504573-1503296 (Counterclockwise)

Preceding gene: 170755802

Following gene: 170756263

Centisome position: 38.01

GC content: 33.33

Gene sequence:

>1278_bases
ATGTCACATATAGTCGGAAAAGATGCCTACAAAAGTTTAGAAGAAAGATTAAATAGGTTTCCACAAGGGGCTCCACCCTC
TGAAACACTTTATAAAATCTTATCCATGATGTTCACTAAAGAAGAAGCAGCAATGGTTGCAAAACTCCCTATAAAGTCAT
TTAACATAAAAACTGCTAGTGAACTTTGGGGAGTTAGTGAAGTCAAAGCTGCTAATATCCTTCAAGCCTTAGCTTCTAAA
GCATTAATTTTAGATCTTGAATGTGAAAGTGATGGAGAGCAAAAATATATGATGGCTCCTCCAATGGCTGGCTTTTTTGA
ATTTGCTTTAATGAGAGTTGGTACACACCTTGACCAAAAGGTTCTTAGTGAACTATTTCATCAATATCTTAATGTGGAAG
ATGATTTCTCTAAAGAGCTATTTTGGGGTACAGAAACAAAATTAGGTAGAGCCTTTGTTCAAGAGAGGGTTTTAAATGAT
GAAAATTCTATAAATATATTAGATTATGAAAAAGCAAGTTACATAATAAAAAATGCTAAACATATAGGTGTTAGTTCATG
TTATTGTCGACATAAAGCCCATCATTTAGGAGATGACTGTTACGCCCCTATGGAAACTTGCATGAGCTTTTCTACCACTG
CTTACACTCTTATAAAGCATAATTATGCTAGAAAAATAGATGCTTCTGAAGCTCTAGATATTTTAAATATGTGCTATGAT
TATAATCTAGTACAATGTGGAGAAAATGTTCAAAAGCAACCAAACTTTATTTGCAATTGTTGTAAATGCCATTGTGAAGC
ATTTGTATCTGCAAAAAAATTTGGATTCTTAGTTCCAGTTAATACCACCAGTTATTTACCTAACATAGATAAAGATAGGT
GTGTGGGCTGTGGAAAATGCACTAAAGTTTGTCCTATGGAAGCAATTAAATTAAAGGAAACTTCATTAGAAAATCATAAT
TCTAAAATAGCTGAACTCTCCGAAGATTTATGCCTTGGCTGTGGGGTTTGTGTGAAAAATTGCAAAACTAATGCTATTAA
GTTAGTTCGTAGAAAGGAAAGTGTTATCACACCTGTAACCACTGTTCATAGAGCAGTATTATCTGCAATAGAAAAAGGCC
AACTGCAAAATTTAATTTTTGATAATAACGCTCATTTAAGCCATAAAGCCATGGCTGCTATATTAGGAAGCATCCTTAAG
CTTTCTCCTGTAAAAAAAGCAATGGCAAGTAAACAAATGAAATCTGTTTATTTGGCTAAACTCCTAGAAAATACTTAA

Upstream 100 bases:

>100_bases
TATTATAGGAACATAATTATTCTTAATAATCACATTAAATTATTGCATTTATTACCAATCTATGCAATCATATAATTAAC
AATTAGATTGAGGTGAAAAC

Downstream 100 bases:

>100_bases
TAACTTTAAATAATTTTTTAAAGTCACTGTAAATACATATATAATATATAATATAGAAATGAGGTTTTATCATTGCTCAA
GATAGAAGATATTTTATCTG

Product: iron-sulfur cluster-binding protein

Products: NA

Alternate protein names: Pyridine Nucleotide-Disulphide Oxidoreductase; FAD-Dependent Pyridine Nucleotide-Disulphide Oxidoreductase; Ferredoxin; 4Fe-4S Ferredoxin

Number of amino acids: Translated: 425; Mature: 424

Protein sequence:

>425_residues
MSHIVGKDAYKSLEERLNRFPQGAPPSETLYKILSMMFTKEEAAMVAKLPIKSFNIKTASELWGVSEVKAANILQALASK
ALILDLECESDGEQKYMMAPPMAGFFEFALMRVGTHLDQKVLSELFHQYLNVEDDFSKELFWGTETKLGRAFVQERVLND
ENSINILDYEKASYIIKNAKHIGVSSCYCRHKAHHLGDDCYAPMETCMSFSTTAYTLIKHNYARKIDASEALDILNMCYD
YNLVQCGENVQKQPNFICNCCKCHCEAFVSAKKFGFLVPVNTTSYLPNIDKDRCVGCGKCTKVCPMEAIKLKETSLENHN
SKIAELSEDLCLGCGVCVKNCKTNAIKLVRRKESVITPVTTVHRAVLSAIEKGQLQNLIFDNNAHLSHKAMAAILGSILK
LSPVKKAMASKQMKSVYLAKLLENT

Sequences:

>Translated_425_residues
MSHIVGKDAYKSLEERLNRFPQGAPPSETLYKILSMMFTKEEAAMVAKLPIKSFNIKTASELWGVSEVKAANILQALASK
ALILDLECESDGEQKYMMAPPMAGFFEFALMRVGTHLDQKVLSELFHQYLNVEDDFSKELFWGTETKLGRAFVQERVLND
ENSINILDYEKASYIIKNAKHIGVSSCYCRHKAHHLGDDCYAPMETCMSFSTTAYTLIKHNYARKIDASEALDILNMCYD
YNLVQCGENVQKQPNFICNCCKCHCEAFVSAKKFGFLVPVNTTSYLPNIDKDRCVGCGKCTKVCPMEAIKLKETSLENHN
SKIAELSEDLCLGCGVCVKNCKTNAIKLVRRKESVITPVTTVHRAVLSAIEKGQLQNLIFDNNAHLSHKAMAAILGSILK
LSPVKKAMASKQMKSVYLAKLLENT
>Mature_424_residues
SHIVGKDAYKSLEERLNRFPQGAPPSETLYKILSMMFTKEEAAMVAKLPIKSFNIKTASELWGVSEVKAANILQALASKA
LILDLECESDGEQKYMMAPPMAGFFEFALMRVGTHLDQKVLSELFHQYLNVEDDFSKELFWGTETKLGRAFVQERVLNDE
NSINILDYEKASYIIKNAKHIGVSSCYCRHKAHHLGDDCYAPMETCMSFSTTAYTLIKHNYARKIDASEALDILNMCYDY
NLVQCGENVQKQPNFICNCCKCHCEAFVSAKKFGFLVPVNTTSYLPNIDKDRCVGCGKCTKVCPMEAIKLKETSLENHNS
KIAELSEDLCLGCGVCVKNCKTNAIKLVRRKESVITPVTTVHRAVLSAIEKGQLQNLIFDNNAHLSHKAMAAILGSILKL
SPVKKAMASKQMKSVYLAKLLENT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47535; Mature: 47404

Theoretical pI: Translated: 8.02; Mature: 8.02

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.7 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
8.2 %Cys+Met (Translated Protein)
4.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
8.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHIVGKDAYKSLEERLNRFPQGAPPSETLYKILSMMFTKEEAAMVAKLPIKSFNIKTAS
CCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH
ELWGVSEVKAANILQALASKALILDLECESDGEQKYMMAPPMAGFFEFALMRVGTHLDQK
HHCCHHHHHHHHHHHHHHCCEEEEEEECCCCCCCEEEECCCHHHHHHHHHHHHCCHHHHH
VLSELFHQYLNVEDDFSKELFWGTETKLGRAFVQERVLNDENSINILDYEKASYIIKNAK
HHHHHHHHHCCCCCCCCHHHHCCCHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHH
HIGVSSCYCRHKAHHLGDDCYAPMETCMSFSTTAYTLIKHNYARKIDASEALDILNMCYD
HCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHC
YNLVQCGENVQKQPNFICNCCKCHCEAFVSAKKFGFLVPVNTTSYLPNIDKDRCVGCGKC
CCHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHCCEEEECCCHHHCCCCCHHHCCCCCCC
TKVCPMEAIKLKETSLENHNSKIAELSEDLCLGCGVCVKNCKTNAIKLVRRKESVITPVT
CCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHH
TVHRAVLSAIEKGQLQNLIFDNNAHLSHKAMAAILGSILKLSPVKKAMASKQMKSVYLAK
HHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLENT
HHHCC
>Mature Secondary Structure 
SHIVGKDAYKSLEERLNRFPQGAPPSETLYKILSMMFTKEEAAMVAKLPIKSFNIKTAS
CCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH
ELWGVSEVKAANILQALASKALILDLECESDGEQKYMMAPPMAGFFEFALMRVGTHLDQK
HHCCHHHHHHHHHHHHHHCCEEEEEEECCCCCCCEEEECCCHHHHHHHHHHHHCCHHHHH
VLSELFHQYLNVEDDFSKELFWGTETKLGRAFVQERVLNDENSINILDYEKASYIIKNAK
HHHHHHHHHCCCCCCCCHHHHCCCHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHH
HIGVSSCYCRHKAHHLGDDCYAPMETCMSFSTTAYTLIKHNYARKIDASEALDILNMCYD
HCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHC
YNLVQCGENVQKQPNFICNCCKCHCEAFVSAKKFGFLVPVNTTSYLPNIDKDRCVGCGKC
CCHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHCCEEEECCCHHHCCCCCHHHCCCCCCC
TKVCPMEAIKLKETSLENHNSKIAELSEDLCLGCGVCVKNCKTNAIKLVRRKESVITPVT
CCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHH
TVHRAVLSAIEKGQLQNLIFDNNAHLSHKAMAAILGSILKLSPVKKAMASKQMKSVYLAK
HHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLENT
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA