| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170755802
Identifier: 170755802
GI number: 170755802
Start: 1516033
End: 1516305
Strand: Reverse
Name: 170755802
Synonym: CLD_3184
Alternate gene names: NA
Gene position: 1516305-1516033 (Counterclockwise)
Preceding gene: 170754523
Following gene: 170757405
Centisome position: 38.31
GC content: 31.87
Gene sequence:
>273_bases ATGACTGTTATCAATAAGCTTAATCAAACAATGGAAGCGCTAAAAGGCACAGAATCTAATTGCAGAACTTTTTCTATGGA TACGGATGATCCTAATGCAAAACAAATGTTTAATCAAATAGCTGAAAATATGAAAATGTGTGAAAACATGTTACAAAGCA GAATTAACTTTGTTATGAGTGAAGAACCACAATACCAACCTGAAGAACAACAAAAGCAAATACAGCAACAAATTCAAATG CAACAACAGCAACAACAAGATCAACAACAATAA
Upstream 100 bases:
>100_bases TACCCCTTCATTTATTTTCATTGTAAATTTTTTAATAGTATAAATTTATTTATATTATGAAATACTAAATAATGAATTAT AAAAATTGGAGGTATTATAA
Downstream 100 bases:
>100_bases AAGATACGCTTATTAAAGAAATTTTTATAAATAAAACACTATCAAATTGTATATAAATATTTGATAGTGTTTTATTATAT TTAATTATTAATATCAAACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 90; Mature: 89
Protein sequence:
>90_residues MTVINKLNQTMEALKGTESNCRTFSMDTDDPNAKQMFNQIAENMKMCENMLQSRINFVMSEEPQYQPEEQQKQIQQQIQM QQQQQQDQQQ
Sequences:
>Translated_90_residues MTVINKLNQTMEALKGTESNCRTFSMDTDDPNAKQMFNQIAENMKMCENMLQSRINFVMSEEPQYQPEEQQKQIQQQIQM QQQQQQDQQQ >Mature_89_residues TVINKLNQTMEALKGTESNCRTFSMDTDDPNAKQMFNQIAENMKMCENMLQSRINFVMSEEPQYQPEEQQKQIQQQIQMQ QQQQQDQQQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10707; Mature: 10576
Theoretical pI: Translated: 4.21; Mature: 4.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 10.0 %Met (Translated Protein) 12.2 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 9.0 %Met (Mature Protein) 11.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVINKLNQTMEALKGTESNCRTFSMDTDDPNAKQMFNQIAENMKMCENMLQSRINFVMS CHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC EEPQYQPEEQQKQIQQQIQMQQQQQQDQQQ CCCCCCCHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TVINKLNQTMEALKGTESNCRTFSMDTDDPNAKQMFNQIAENMKMCENMLQSRINFVMS HHHHHHHHHHHHHHCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC EEPQYQPEEQQKQIQQQIQMQQQQQQDQQQ CCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA