| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170756263
Identifier: 170756263
GI number: 170756263
Start: 1502900
End: 1503223
Strand: Reverse
Name: 170756263
Synonym: CLD_3196
Alternate gene names: NA
Gene position: 1503223-1502900 (Counterclockwise)
Preceding gene: 170757405
Following gene: 170757601
Centisome position: 37.98
GC content: 25.0
Gene sequence:
>324_bases TTGCTCAAGATAGAAGATATTTTATCTGGAAATTTTTCATCATATCCAGAAGAAACGCAAATTTATATGAAAAATTATGC TGAAAAGCTTAGAAATCATATAAAAACAGAATTAATAAATGATAAGGCAGATAAAATGCTTAAGGACATAGATAAAAGTA AAGATTATTTTATAGACACACTAACTGAAATTTTAGAAAACGGCTGCAAAGGTTATAACACCATGTCCACTAAAGCTTTA TTAAATATATATTTAAATGTTAAATCTGAAAAGGACTTTATAAATTTAATAGAACAGATTTCAAATGAAGTGCTACCTTT ATAA
Upstream 100 bases:
>100_bases TTTGGCTAAACTCCTAGAAAATACTTAATAACTTTAAATAATTTTTTAAAGTCACTGTAAATACATATATAATATATAAT ATAGAAATGAGGTTTTATCA
Downstream 100 bases:
>100_bases ATCTCTAATAAAAATACATAAGATACACATTAAGCTTCTTATGTATTTTTATTAGTATAGCCCATACAAATAGTTAGCAA TTATTCATAATCATGGTATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 107; Mature: 107
Protein sequence:
>107_residues MLKIEDILSGNFSSYPEETQIYMKNYAEKLRNHIKTELINDKADKMLKDIDKSKDYFIDTLTEILENGCKGYNTMSTKAL LNIYLNVKSEKDFINLIEQISNEVLPL
Sequences:
>Translated_107_residues MLKIEDILSGNFSSYPEETQIYMKNYAEKLRNHIKTELINDKADKMLKDIDKSKDYFIDTLTEILENGCKGYNTMSTKAL LNIYLNVKSEKDFINLIEQISNEVLPL >Mature_107_residues MLKIEDILSGNFSSYPEETQIYMKNYAEKLRNHIKTELINDKADKMLKDIDKSKDYFIDTLTEILENGCKGYNTMSTKAL LNIYLNVKSEKDFINLIEQISNEVLPL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12457; Mature: 12457
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKIEDILSGNFSSYPEETQIYMKNYAEKLRNHIKTELINDKADKMLKDIDKSKDYFIDT CCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH LTEILENGCKGYNTMSTKALLNIYLNVKSEKDFINLIEQISNEVLPL HHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCC >Mature Secondary Structure MLKIEDILSGNFSSYPEETQIYMKNYAEKLRNHIKTELINDKADKMLKDIDKSKDYFIDT CCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH LTEILENGCKGYNTMSTKALLNIYLNVKSEKDFINLIEQISNEVLPL HHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA