| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
Click here to switch to the map view.
The map label for this gene is 170756884
Identifier: 170756884
GI number: 170756884
Start: 1803923
End: 1804798
Strand: Reverse
Name: 170756884
Synonym: CLD_2931
Alternate gene names: NA
Gene position: 1804798-1803923 (Counterclockwise)
Preceding gene: 170757834
Following gene: 170755832
Centisome position: 45.6
GC content: 23.97
Gene sequence:
>876_bases ATGAAAACTATTAGTATTTTTGAAGAACAGCTTGAATTAGATACTGACCCAAAAGAGCTTTGTAAAGTGCACAAATTTTT TGATGAATACATCAGTGTTTTTAATAAAAATCATAATTTTAAAGAAAATACCGAAAAAATATTATATGAATATAGCAAAG AAAGTATATATAAAACCTTTAATATTTTAAAAAATACCTTTGAAAAGAAAGTAAATCTTATATCTAACTCATTAGGTTTA AAAATCATACCTGGTCTAATAGTTTTTATAGGAGATGGTTATATAGATGGTCATGGGGCATTAATAAATAATAAACCCTA TATATTCTTTGATTTATCTGCAATTATTCCGAACTTTAATAAATATAATATGGATTTGTTTGTAACTCATGAACTTCTCC ATGGAATTCATTATTCATATAATCCTTGCTTTTATCCTAAATATTATAACAGTATTGAAGAAAAATATTTTAAAAGAATG ATTGCAGAAGGAATTGCCATTAATTTAAGTCCTACTTTTTCCTCAAGTACAATTGAAGATTCATATTGGATGGGATTTTT TAATAAAAAAGAAGTTCAAATTTGGGTAGATAATTGTGAGAAAATAAAAAATAATATTGCATATAGAATAAATTCATCCT TAAAATCCTCTTCATTTGATGAAGATTTATACCATACTCTTTATACTGTTTCTGATTTAAAACACTTAACTAGTTCTAGA TTAGCATACTATTATGGCTCACAAATAATCAATGAACTTCGTGATTGTAAATCAGTAAATGAAATATTATCAACGGATTA TGAATATTTCAAAGACTGTATTTTATCTTACTTTCATAAGATTGATTTAAATGGATACAATAAAATATGTAATTAA
Upstream 100 bases:
>100_bases AAATTATATTCCAATTATATTGTATTTTTCAATATAATGTATATAATTAAACTTATATTTATACATTAGATATTTAATAT ATAAAGGTATGGTGGTATAA
Downstream 100 bases:
>100_bases GTTTAGTTGTATGTTATACTTAATAAGTTGAAATAAAATAAATAAGAAAAGAGAAAAAATGATGAGATATGCTAAAGTAG AAAAATTAATAAAAAAAATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 291; Mature: 291
Protein sequence:
>291_residues MKTISIFEEQLELDTDPKELCKVHKFFDEYISVFNKNHNFKENTEKILYEYSKESIYKTFNILKNTFEKKVNLISNSLGL KIIPGLIVFIGDGYIDGHGALINNKPYIFFDLSAIIPNFNKYNMDLFVTHELLHGIHYSYNPCFYPKYYNSIEEKYFKRM IAEGIAINLSPTFSSSTIEDSYWMGFFNKKEVQIWVDNCEKIKNNIAYRINSSLKSSSFDEDLYHTLYTVSDLKHLTSSR LAYYYGSQIINELRDCKSVNEILSTDYEYFKDCILSYFHKIDLNGYNKICN
Sequences:
>Translated_291_residues MKTISIFEEQLELDTDPKELCKVHKFFDEYISVFNKNHNFKENTEKILYEYSKESIYKTFNILKNTFEKKVNLISNSLGL KIIPGLIVFIGDGYIDGHGALINNKPYIFFDLSAIIPNFNKYNMDLFVTHELLHGIHYSYNPCFYPKYYNSIEEKYFKRM IAEGIAINLSPTFSSSTIEDSYWMGFFNKKEVQIWVDNCEKIKNNIAYRINSSLKSSSFDEDLYHTLYTVSDLKHLTSSR LAYYYGSQIINELRDCKSVNEILSTDYEYFKDCILSYFHKIDLNGYNKICN >Mature_291_residues MKTISIFEEQLELDTDPKELCKVHKFFDEYISVFNKNHNFKENTEKILYEYSKESIYKTFNILKNTFEKKVNLISNSLGL KIIPGLIVFIGDGYIDGHGALINNKPYIFFDLSAIIPNFNKYNMDLFVTHELLHGIHYSYNPCFYPKYYNSIEEKYFKRM IAEGIAINLSPTFSSSTIEDSYWMGFFNKKEVQIWVDNCEKIKNNIAYRINSSLKSSSFDEDLYHTLYTVSDLKHLTSSR LAYYYGSQIINELRDCKSVNEILSTDYEYFKDCILSYFHKIDLNGYNKICN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34299; Mature: 34299
Theoretical pI: Translated: 6.42; Mature: 6.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTISIFEEQLELDTDPKELCKVHKFFDEYISVFNKNHNFKENTEKILYEYSKESIYKTF CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH NILKNTFEKKVNLISNSLGLKIIPGLIVFIGDGYIDGHGALINNKPYIFFDLSAIIPNFN HHHHHHHHHHHHHHHHCCCCEECCCEEEEEECCEECCCCEEECCCCEEEEEHHHHCCCCC KYNMDLFVTHELLHGIHYSYNPCFYPKYYNSIEEKYFKRMIAEGIAINLSPTFSSSTIED CCCCCEEEHHHHHHHHCCCCCCEECHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCC SYWMGFFNKKEVQIWVDNCEKIKNNIAYRINSSLKSSSFDEDLYHTLYTVSDLKHLTSSR HHHCCCCCCCEEEEEHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHH LAYYYGSQIINELRDCKSVNEILSTDYEYFKDCILSYFHKIDLNGYNKICN HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHCCC >Mature Secondary Structure MKTISIFEEQLELDTDPKELCKVHKFFDEYISVFNKNHNFKENTEKILYEYSKESIYKTF CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH NILKNTFEKKVNLISNSLGLKIIPGLIVFIGDGYIDGHGALINNKPYIFFDLSAIIPNFN HHHHHHHHHHHHHHHHCCCCEECCCEEEEEECCEECCCCEEECCCCEEEEEHHHHCCCCC KYNMDLFVTHELLHGIHYSYNPCFYPKYYNSIEEKYFKRMIAEGIAINLSPTFSSSTIED CCCCCEEEHHHHHHHHCCCCCCEECHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCC SYWMGFFNKKEVQIWVDNCEKIKNNIAYRINSSLKSSSFDEDLYHTLYTVSDLKHLTSSR HHHCCCCCCCEEEEEHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHH LAYYYGSQIINELRDCKSVNEILSTDYEYFKDCILSYFHKIDLNGYNKICN HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA