| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
Click here to switch to the map view.
The map label for this gene is 170755832
Identifier: 170755832
GI number: 170755832
Start: 1803445
End: 1803864
Strand: Reverse
Name: 170755832
Synonym: CLD_2932
Alternate gene names: NA
Gene position: 1803864-1803445 (Counterclockwise)
Preceding gene: 170756884
Following gene: 170755262
Centisome position: 45.57
GC content: 28.33
Gene sequence:
>420_bases ATGATGAGATATGCTAAAGTAGAAAAATTAATAAAAAAAATGGATAGAGAAATAGAATCACTTAAAATTGCCTCAAAATA TCTATCAAACATAGATGAAATTAATGAGGTTAGAAATACTTTAAATAAGAAAAGACAAGAATTAGCTGATGAACTTTATA GTGAAGATACAAAATCATATTATGATTGTCGTGCAATTATAAGAGAACTTTTGGATAAAGAACTAAATGAAGAAGATCAA AAGCAATTACTTGAAAACATTAAAGAAAAGTTTGGAAGACAATCACCAAATCCCACAAAACAAAGCGTTGGATTAAATGC ATGGCTTAAAGAACTAGATATTGAATTTAATTGGGTGCAAGCTGAAGAAAACAGCTGGGCTACTCTTATAATAACTGATT TTGGAGCACATGAGAAATAA
Upstream 100 bases:
>100_bases CATAAGATTGATTTAAATGGATACAATAAAATATGTAATTAAGTTTAGTTGTATGTTATACTTAATAAGTTGAAATAAAA TAAATAAGAAAAGAGAAAAA
Downstream 100 bases:
>100_bases TTTAAGAAAAGTCTACATATATAGGAAATTGAGTATGTCAAGAATTTTGTGTAAATATCCATAAAAATTTTAAAATCAAT ATATTTAAGGATAACTAGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 139; Mature: 139
Protein sequence:
>139_residues MMRYAKVEKLIKKMDREIESLKIASKYLSNIDEINEVRNTLNKKRQELADELYSEDTKSYYDCRAIIRELLDKELNEEDQ KQLLENIKEKFGRQSPNPTKQSVGLNAWLKELDIEFNWVQAEENSWATLIITDFGAHEK
Sequences:
>Translated_139_residues MMRYAKVEKLIKKMDREIESLKIASKYLSNIDEINEVRNTLNKKRQELADELYSEDTKSYYDCRAIIRELLDKELNEEDQ KQLLENIKEKFGRQSPNPTKQSVGLNAWLKELDIEFNWVQAEENSWATLIITDFGAHEK >Mature_139_residues MMRYAKVEKLIKKMDREIESLKIASKYLSNIDEINEVRNTLNKKRQELADELYSEDTKSYYDCRAIIRELLDKELNEEDQ KQLLENIKEKFGRQSPNPTKQSVGLNAWLKELDIEFNWVQAEENSWATLIITDFGAHEK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16486; Mature: 16486
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMRYAKVEKLIKKMDREIESLKIASKYLSNIDEINEVRNTLNKKRQELADELYSEDTKSY CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YDCRAIIRELLDKELNEEDQKQLLENIKEKFGRQSPNPTKQSVGLNAWLKELDIEFNWVQ HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEEEE AEENSWATLIITDFGAHEK ECCCCCEEEEEECCCCCCC >Mature Secondary Structure MMRYAKVEKLIKKMDREIESLKIASKYLSNIDEINEVRNTLNKKRQELADELYSEDTKSY CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YDCRAIIRELLDKELNEEDQKQLLENIKEKFGRQSPNPTKQSVGLNAWLKELDIEFNWVQ HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEEEE AEENSWATLIITDFGAHEK ECCCCCEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA