| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170755764
Identifier: 170755764
GI number: 170755764
Start: 3715732
End: 3716391
Strand: Reverse
Name: 170755764
Synonym: CLD_1103
Alternate gene names: NA
Gene position: 3716391-3715732 (Counterclockwise)
Preceding gene: 170755963
Following gene: 170755009
Centisome position: 93.89
GC content: 23.94
Gene sequence:
>660_bases ATGGATAACAAATATAATAATCTTTTCTATTGGGAAAATTTACTGATAAAGAGAGAGAACATCTGGAGTGGAAACTTTAA AGATATACCAATAAGCCCAAAATCTCTTTTTATTAACACTACCATAATAGATTATGAAAAAAATATTTTTGACAATAATT GGGCTGTATATCCAGATGCAGAATCCCTTTTGGGGTTCCTACAATATATATTTATACCTACAGTTTTCTTTTGTTATACA AATAATACAAGTGAAGAAATAGTTACTCCTACAGCTTCTAAAAAAGAATTACTAGAAGAAATAAAAACATTATGTAGAAA TGAAAATTCTATAGTTGAAATAGAATATTTTATTGATAAAGCATATAATTTATGTGAATTAAATAAATGTCACCTCATAG AAGAGTTGAAAAAGTATTGCTTAGAATTTAATAGGCAATGGGAAAAAAATACCAGAATATTTCATATTAATATATATTCT AGTGGTAAAGAAATAATAGAAAAGATTTCAAAAGAAGATAATTTCTTAGAAGTTATAGAGGAAGATATAGGTATGTCTAT AGATACCTTAAAAGAAATTACAAAAGATTTACATCATAACTTATTTATGAAAAATAACTTTATAAAAATTTTGAACAACC AAATAGGTTGTATAATTTAA
Upstream 100 bases:
>100_bases CAACTTAAAAATAACTTTATACATCAATTTAAAAACCATATAAAATTTATATGTAACACAAAAATTATTTAACACAAACT TTATACAAGAGGTATGCTAT
Downstream 100 bases:
>100_bases CAATCTCATAATAAAAGTATAAAAATAAAGGATTAGATCTTCTAGTCCTTTATTTTTTTATGATCTATTTTGAAATAAAT CTTTAATTTTTAAATATACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 219; Mature: 219
Protein sequence:
>219_residues MDNKYNNLFYWENLLIKRENIWSGNFKDIPISPKSLFINTTIIDYEKNIFDNNWAVYPDAESLLGFLQYIFIPTVFFCYT NNTSEEIVTPTASKKELLEEIKTLCRNENSIVEIEYFIDKAYNLCELNKCHLIEELKKYCLEFNRQWEKNTRIFHINIYS SGKEIIEKISKEDNFLEVIEEDIGMSIDTLKEITKDLHHNLFMKNNFIKILNNQIGCII
Sequences:
>Translated_219_residues MDNKYNNLFYWENLLIKRENIWSGNFKDIPISPKSLFINTTIIDYEKNIFDNNWAVYPDAESLLGFLQYIFIPTVFFCYT NNTSEEIVTPTASKKELLEEIKTLCRNENSIVEIEYFIDKAYNLCELNKCHLIEELKKYCLEFNRQWEKNTRIFHINIYS SGKEIIEKISKEDNFLEVIEEDIGMSIDTLKEITKDLHHNLFMKNNFIKILNNQIGCII >Mature_219_residues MDNKYNNLFYWENLLIKRENIWSGNFKDIPISPKSLFINTTIIDYEKNIFDNNWAVYPDAESLLGFLQYIFIPTVFFCYT NNTSEEIVTPTASKKELLEEIKTLCRNENSIVEIEYFIDKAYNLCELNKCHLIEELKKYCLEFNRQWEKNTRIFHINIYS SGKEIIEKISKEDNFLEVIEEDIGMSIDTLKEITKDLHHNLFMKNNFIKILNNQIGCII
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26083; Mature: 26083
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDNKYNNLFYWENLLIKRENIWSGNFKDIPISPKSLFINTTIIDYEKNIFDNNWAVYPDA CCCCCCCEEEEHHEEEEECCCCCCCCCCCCCCCHHEEEEEEEEECCCCCCCCCCEECCCH ESLLGFLQYIFIPTVFFCYTNNTSEEIVTPTASKKELLEEIKTLCRNENSIVEIEYFIDK HHHHHHHHHHHHHHHEEEEECCCCCCEECCCCCHHHHHHHHHHHHCCCCCEEEEEEEHHH AYNLCELNKCHLIEELKKYCLEFNRQWEKNTRIFHINIYSSGKEIIEKISKEDNFLEVIE CCCHHCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCHHHHHHHHCCCHHHHHHH EDIGMSIDTLKEITKDLHHNLFMKNNFIKILNNQIGCII HHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCC >Mature Secondary Structure MDNKYNNLFYWENLLIKRENIWSGNFKDIPISPKSLFINTTIIDYEKNIFDNNWAVYPDA CCCCCCCEEEEHHEEEEECCCCCCCCCCCCCCCHHEEEEEEEEECCCCCCCCCCEECCCH ESLLGFLQYIFIPTVFFCYTNNTSEEIVTPTASKKELLEEIKTLCRNENSIVEIEYFIDK HHHHHHHHHHHHHHHEEEEECCCCCCEECCCCCHHHHHHHHHHHHCCCCCEEEEEEEHHH AYNLCELNKCHLIEELKKYCLEFNRQWEKNTRIFHINIYSSGKEIIEKISKEDNFLEVIE CCCHHCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCHHHHHHHHCCCHHHHHHH EDIGMSIDTLKEITKDLHHNLFMKNNFIKILNNQIGCII HHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA