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The map label for this gene is yfeT [C]

Identifier: 170755076

GI number: 170755076

Start: 359310

End: 360071

Strand: Direct

Name: yfeT [C]

Synonym: CLD_0471

Alternate gene names: 170755076

Gene position: 359310-360071 (Clockwise)

Preceding gene: 170755203

Following gene: 170755331

Centisome position: 9.08

GC content: 24.15

Gene sequence:

>762_bases
ATGAAGTTAGATATTAGTAAGATTGTAGATAAATATCACTTAAGTAAAGTAGAAGAGAGTATATTAATTTATATAATAAA
TAATATAGATCATGTTAAAGAAATAGGGGTAAGAGGAGTAGCAAAGGAACACTACACCTCTACTACCACTATTGTGAATT
TAGCAAAAAAAATAGGATATTCTGGATTCTTAGACATGTATTATAATTTAAGTTTTACTTTGAAGGATAAAAGAAATTAT
TTTAATAGCGAAAAAAATAATAAATATTATGGAGTAGAATTAGAAGAACTGTTAGCATTAATAGAAGATAAAGATATAAG
TGATTTTATAGATTTATTAATAAAAAATAAAAATGAAGTTATATATACTAATGGGTTAGCATTCTCATATTTTATTGCAC
AATATTTTACTAGAAAACTTATAGTTCTTGGTTTTAGATGCATTTATTCTGAAGCATATGAAAGTTATGATGTAAATGCT
ATAAAAGCTAAATTACTAATAGCTATTTCTAAATCAGGTGAAACAGATTTTATAATAAGGGCTTCTGAATCCGCTAAGAA
AAATGGGATAAAAATAGTTTCTTTTACAGGAGAAGCGGAAAATACATTAGCTAAAATGTCTGATATAAACTTTAAAATAT
ATGACATGCATACTATAGATGATCGTAATAAACTGTCTAATTCATTCTATCCTAATGCATTAATGTTATTTGAATTTTTA
ATAGGTAAATATTTAGAAAGAATCAAAGTTGATTCAGTTTAA

Upstream 100 bases:

>100_bases
TTGCTTTTAATTCAGCAGAATGTGAGATATAATATAGTAATACAATTAAAATAATATTTATCAATTAAATAATAAGGTCT
TTATAACAGAGGTGAAGTAT

Downstream 100 bases:

>100_bases
TACCAAAAATTTATTATTGGATTTCATAATAATGTTTTATTTCATTGGTATGTTTTCTAATCTTATTAAGGAGATAAGCT
TTGTATTTTTATGAAATTCA

Product: SIS domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 253

Protein sequence:

>253_residues
MKLDISKIVDKYHLSKVEESILIYIINNIDHVKEIGVRGVAKEHYTSTTTIVNLAKKIGYSGFLDMYYNLSFTLKDKRNY
FNSEKNNKYYGVELEELLALIEDKDISDFIDLLIKNKNEVIYTNGLAFSYFIAQYFTRKLIVLGFRCIYSEAYESYDVNA
IKAKLLIAISKSGETDFIIRASESAKKNGIKIVSFTGEAENTLAKMSDINFKIYDMHTIDDRNKLSNSFYPNALMLFEFL
IGKYLERIKVDSV

Sequences:

>Translated_253_residues
MKLDISKIVDKYHLSKVEESILIYIINNIDHVKEIGVRGVAKEHYTSTTTIVNLAKKIGYSGFLDMYYNLSFTLKDKRNY
FNSEKNNKYYGVELEELLALIEDKDISDFIDLLIKNKNEVIYTNGLAFSYFIAQYFTRKLIVLGFRCIYSEAYESYDVNA
IKAKLLIAISKSGETDFIIRASESAKKNGIKIVSFTGEAENTLAKMSDINFKIYDMHTIDDRNKLSNSFYPNALMLFEFL
IGKYLERIKVDSV
>Mature_253_residues
MKLDISKIVDKYHLSKVEESILIYIINNIDHVKEIGVRGVAKEHYTSTTTIVNLAKKIGYSGFLDMYYNLSFTLKDKRNY
FNSEKNNKYYGVELEELLALIEDKDISDFIDLLIKNKNEVIYTNGLAFSYFIAQYFTRKLIVLGFRCIYSEAYESYDVNA
IKAKLLIAISKSGETDFIIRASESAKKNGIKIVSFTGEAENTLAKMSDINFKIYDMHTIDDRNKLSNSFYPNALMLFEFL
IGKYLERIKVDSV

Specific function: Unknown

COG id: COG1737

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SIS domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000281
- InterPro:   IPR001347
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01418 HTH_6; PF01380 SIS [H]

EC number: NA

Molecular weight: Translated: 29198; Mature: 29198

Theoretical pI: Translated: 7.62; Mature: 7.62

Prosite motif: PS51071 HTH_RPIR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLDISKIVDKYHLSKVEESILIYIINNIDHVKEIGVRGVAKEHYTSTTTIVNLAKKIGY
CCCCHHHHHHHHHHHHHHCEEEEEEECCHHHHHHHCCCCCHHHHHCHHHHHHHHHHHHCC
SGFLDMYYNLSFTLKDKRNYFNSEKNNKYYGVELEELLALIEDKDISDFIDLLIKNKNEV
CCEEEEEEEEEEEEECCHHHCCCCCCCCEECCCHHHHHHHHCCCCHHHHHHHHHCCCCCE
IYTNGLAFSYFIAQYFTRKLIVLGFRCIYSEAYESYDVNAIKAKLLIAISKSGETDFIIR
EEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEEEEEEEECCCCCEEEEE
ASESAKKNGIKIVSFTGEAENTLAKMSDINFKIYDMHTIDDRNKLSNSFYPNALMLFEFL
ECCCCCCCCEEEEEECCCHHHHHHHHHCCCEEEEEEEECCCHHHHCCCCCCCHHHHHHHH
IGKYLERIKVDSV
HHHHHHHHCCCCC
>Mature Secondary Structure
MKLDISKIVDKYHLSKVEESILIYIINNIDHVKEIGVRGVAKEHYTSTTTIVNLAKKIGY
CCCCHHHHHHHHHHHHHHCEEEEEEECCHHHHHHHCCCCCHHHHHCHHHHHHHHHHHHCC
SGFLDMYYNLSFTLKDKRNYFNSEKNNKYYGVELEELLALIEDKDISDFIDLLIKNKNEV
CCEEEEEEEEEEEEECCHHHCCCCCCCCEECCCHHHHHHHHCCCCHHHHHHHHHCCCCCE
IYTNGLAFSYFIAQYFTRKLIVLGFRCIYSEAYESYDVNAIKAKLLIAISKSGETDFIIR
EEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEEEEEEEECCCCCEEEEE
ASESAKKNGIKIVSFTGEAENTLAKMSDINFKIYDMHTIDDRNKLSNSFYPNALMLFEFL
ECCCCCCCCEEEEEECCCHHHHHHHHHCCCEEEEEEEECCCHHHHCCCCCCCHHHHHHHH
IGKYLERIKVDSV
HHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8177218; 11792842 [H]