Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
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Accession | NC_010505 |
Length | 6,077,833 |
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The map label for this gene is tgt [H]
Identifier: 170746469
GI number: 170746469
Start: 22407
End: 23546
Strand: Reverse
Name: tgt [H]
Synonym: Mrad2831_0019
Alternate gene names: 170746469
Gene position: 23546-22407 (Counterclockwise)
Preceding gene: 170746470
Following gene: 170746467
Centisome position: 0.39
GC content: 71.58
Gene sequence:
>1140_bases ATGACCGACAGCGCTCCCTTCCGCTTCGACCTGCTGGCCCGGGACGGCACCGCCCGGACCGGCATGATCGCGACGCCGCG CGGCGAGATCCGGACCCCGGCCTTCATGCCGGTGGGCACCGCCGCGACGGTCAAGGCGATGTATCCCGGCCAGGTCCGTG ACCTCGGCGCCGATGTGGTGCTGGGCAACACCTATCACCTGATGCTGCGGCCCGGCCCGGAGCGCATGGCCCGGCTCGGC GGCCTGCACCGCTTCATGAACTGGGACCGGCCGATCCTGACGGATTCCGGCGGCTTTCAAGTGATGTCGCTCTCCGCCCT GCGGAAGATCGACGAGCAGGGCGTGACCTTCCGCTCACACATCGACGGCACAGCGCACCACATGAGCCCGGAGCGCTCCA TCGAGATTCAGGGTCTGCTCGGCTCCGACATCCAGATGCAGCTCGACGAGTGCGTCCGCCTGCCGGCGGATCACGCGGCC ATCGAGAAGGCCATGCACCTGTCCCTGCGCTGGGCCGAGCGCTGCCGCGTCGCGTTCGGCGAGCAGCCCGGGCGAGCCCT GTTCGGCATCGTCCAGGGCGGGGACGTGCCTGCCCTGCGCGTCGAGAGCGCCCGCGCGCTGACCGATCTCGATCTCAAGG GCTACGCGGTGGGCGGCCTCGCCGTGGGCGAGCCCCAGGCCGTCATGTTCGCCATGATCGAGACGGTGGAGCCGCACCTG CCGGCCGCGAAGCCCCGCTACCTGATGGGCGTCGGCACGCCGGACGACATCCTCGGCGCGGTGGGGCGCGGCATCGACAT GTTCGACTGCGTGATGCCGACCCGCGCCGGCCGGCACGGCCTCGCCTACACGCGCCACGGGCGGGTCAACCTGCGCAACG CCCGCCACGCGGAAGACACCGCGCCGCTCGACGTGGCCTCGACCTGTCCGGCCGCGCGGGACTATTCCCGGGCCTACCTG CACCACCTCGTGCGCTCGAACGAGATCCTCGGGATGATGCTGCTGACGTGGAACAACCTCGCCTACTACCAGGACCTGAT GGCCGGCGCCCGCGCGGCGATCCGCGACGGCCGCTACGCGGATTACTGCGCCGAGACCCGCGCGGGCTGGGCCAGCGCCG AGCGCGCCGCCGCCGCTTGA
Upstream 100 bases:
>100_bases CGATGCGCGCGGCCTACGCGCACGCGATCGGCGCCGGGTACCGGTTCTACTCCTACGGCGACGCCAGCCTGCTCTTCCCG GGCCCGCGCGCGGACACTCC
Downstream 100 bases:
>100_bases CCGGGCATCACGGGTGGGCGAGCACCCGGTAGACCCCATCCGGATCGTCGCGGCCGGTGGCGACGGCGCTCGCGAGATCC GAGACGATGCGCGCCGCCAC
Product: queuine tRNA-ribosyltransferase
Products: NA
Alternate protein names: Guanine insertion enzyme; tRNA-guanine transglycosylase [H]
Number of amino acids: Translated: 379; Mature: 378
Protein sequence:
>379_residues MTDSAPFRFDLLARDGTARTGMIATPRGEIRTPAFMPVGTAATVKAMYPGQVRDLGADVVLGNTYHLMLRPGPERMARLG GLHRFMNWDRPILTDSGGFQVMSLSALRKIDEQGVTFRSHIDGTAHHMSPERSIEIQGLLGSDIQMQLDECVRLPADHAA IEKAMHLSLRWAERCRVAFGEQPGRALFGIVQGGDVPALRVESARALTDLDLKGYAVGGLAVGEPQAVMFAMIETVEPHL PAAKPRYLMGVGTPDDILGAVGRGIDMFDCVMPTRAGRHGLAYTRHGRVNLRNARHAEDTAPLDVASTCPAARDYSRAYL HHLVRSNEILGMMLLTWNNLAYYQDLMAGARAAIRDGRYADYCAETRAGWASAERAAAA
Sequences:
>Translated_379_residues MTDSAPFRFDLLARDGTARTGMIATPRGEIRTPAFMPVGTAATVKAMYPGQVRDLGADVVLGNTYHLMLRPGPERMARLG GLHRFMNWDRPILTDSGGFQVMSLSALRKIDEQGVTFRSHIDGTAHHMSPERSIEIQGLLGSDIQMQLDECVRLPADHAA IEKAMHLSLRWAERCRVAFGEQPGRALFGIVQGGDVPALRVESARALTDLDLKGYAVGGLAVGEPQAVMFAMIETVEPHL PAAKPRYLMGVGTPDDILGAVGRGIDMFDCVMPTRAGRHGLAYTRHGRVNLRNARHAEDTAPLDVASTCPAARDYSRAYL HHLVRSNEILGMMLLTWNNLAYYQDLMAGARAAIRDGRYADYCAETRAGWASAERAAAA >Mature_378_residues TDSAPFRFDLLARDGTARTGMIATPRGEIRTPAFMPVGTAATVKAMYPGQVRDLGADVVLGNTYHLMLRPGPERMARLGG LHRFMNWDRPILTDSGGFQVMSLSALRKIDEQGVTFRSHIDGTAHHMSPERSIEIQGLLGSDIQMQLDECVRLPADHAAI EKAMHLSLRWAERCRVAFGEQPGRALFGIVQGGDVPALRVESARALTDLDLKGYAVGGLAVGEPQAVMFAMIETVEPHLP AAKPRYLMGVGTPDDILGAVGRGIDMFDCVMPTRAGRHGLAYTRHGRVNLRNARHAEDTAPLDVASTCPAARDYSRAYLH HLVRSNEILGMMLLTWNNLAYYQDLMAGARAAIRDGRYADYCAETRAGWASAERAAAA
Specific function: Exchanges the guanine residue with 7-aminomethyl-7- deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). After this exchange, a cyclopentendiol moiety is attached to the 7-aminomethyl group of 7-deazaguanine, resulting in the hyper
COG id: COG0343
COG function: function code J; Queuine/archaeosine tRNA-ribosyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the queuine tRNA-ribosyltransferase family [H]
Homologues:
Organism=Homo sapiens, GI13654276, Length=362, Percent_Identity=43.9226519337017, Blast_Score=306, Evalue=2e-83, Organism=Escherichia coli, GI1786607, Length=359, Percent_Identity=54.0389972144847, Blast_Score=377, Evalue=1e-106, Organism=Caenorhabditis elegans, GI17544680, Length=359, Percent_Identity=42.3398328690808, Blast_Score=285, Evalue=3e-77, Organism=Drosophila melanogaster, GI19920510, Length=362, Percent_Identity=44.7513812154696, Blast_Score=313, Evalue=2e-85,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004803 - InterPro: IPR002616 [H]
Pfam domain/function: PF01702 TGT [H]
EC number: =2.4.2.29 [H]
Molecular weight: Translated: 41336; Mature: 41205
Theoretical pI: Translated: 7.68; Mature: 7.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDSAPFRFDLLARDGTARTGMIATPRGEIRTPAFMPVGTAATVKAMYPGQVRDLGADVV CCCCCCEEEEEEECCCCCCCCEEECCCCCCCCCCCCCCCCCCEEEEECCCHHHHCCCCEE LGNTYHLMLRPGPERMARLGGLHRFMNWDRPILTDSGGFQVMSLSALRKIDEQGVTFRSH ECCEEEEEECCCHHHHHHHHHHHHHHCCCCCEEECCCCCEEEEHHHHHHHHHCCCEEEHH IDGTAHHMSPERSIEIQGLLGSDIQMQLDECVRLPADHAAIEKAMHLSLRWAERCRVAFG CCCHHHHCCCCCCEEEEEECCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCC EQPGRALFGIVQGGDVPALRVESARALTDLDLKGYAVGGLAVGEPQAVMFAMIETVEPHL CCCCCEEEEEEECCCCCEEEECCCHHHCCCCCCCEEECCEECCCCHHHHHHHHHHHCCCC PAAKPRYLMGVGTPDDILGAVGRGIDMFDCVMPTRAGRHGLAYTRHGRVNLRNARHAEDT CCCCCCEEEECCCCHHHHHHHCCCCCHHHHHCCCCCCCCCCEEEECCCEEECCCCCCCCC APLDVASTCPAARDYSRAYLHHLVRSNEILGMMLLTWNNLAYYQDLMAGARAAIRDGRYA CCCCHHHCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCCCH DYCAETRAGWASAERAAAA HHHHHHHCCCHHHHHHHCC >Mature Secondary Structure TDSAPFRFDLLARDGTARTGMIATPRGEIRTPAFMPVGTAATVKAMYPGQVRDLGADVV CCCCCEEEEEEECCCCCCCCEEECCCCCCCCCCCCCCCCCCEEEEECCCHHHHCCCCEE LGNTYHLMLRPGPERMARLGGLHRFMNWDRPILTDSGGFQVMSLSALRKIDEQGVTFRSH ECCEEEEEECCCHHHHHHHHHHHHHHCCCCCEEECCCCCEEEEHHHHHHHHHCCCEEEHH IDGTAHHMSPERSIEIQGLLGSDIQMQLDECVRLPADHAAIEKAMHLSLRWAERCRVAFG CCCHHHHCCCCCCEEEEEECCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCC EQPGRALFGIVQGGDVPALRVESARALTDLDLKGYAVGGLAVGEPQAVMFAMIETVEPHL CCCCCEEEEEEECCCCCEEEECCCHHHCCCCCCCEEECCEECCCCHHHHHHHHHHHCCCC PAAKPRYLMGVGTPDDILGAVGRGIDMFDCVMPTRAGRHGLAYTRHGRVNLRNARHAEDT CCCCCCEEEECCCCHHHHHHHCCCCCHHHHHCCCCCCCCCCEEEECCCEEECCCCCCCCC APLDVASTCPAARDYSRAYLHHLVRSNEILGMMLLTWNNLAYYQDLMAGARAAIRDGRYA CCCCHHHCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCCCH DYCAETRAGWASAERAAAA HHHHHHHCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11481430 [H]