Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
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Accession | NC_010505 |
Length | 6,077,833 |
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The map label for this gene is fmt [H]
Identifier: 170746467
GI number: 170746467
Start: 20186
End: 21064
Strand: Reverse
Name: fmt [H]
Synonym: Mrad2831_0017
Alternate gene names: 170746467
Gene position: 21064-20186 (Counterclockwise)
Preceding gene: 170746469
Following gene: 170746466
Centisome position: 0.35
GC content: 63.82
Gene sequence:
>879_bases ATGTCGAAGACGCCGTCGATCCTCGTGTGCGGGAAAAACAAGGTATGCGCCGACACACTCGAGGTCCTTCGTCGTGAGCT GCCAGATCACACGATCGTGTACGTTTTCGCCGACAAGGACGAGACTTCCGCGCGGGTCGCGCGCGACGTGGCGCACCGCC TCGGGATCGAGAGCCGCGGCGTCCGAAATGCCGAGGCCTTCGCGCGCACCTATTTCGAGATCGATCCCACTCTGCTGCTG TCGGTTCAGTTCTCGATCATCTTGAGACACGACATCATCGAGCACGGCGGTGACCGACTCATCAACCTCCACTTCTCGCC GTTACCGCGCTACCGCGGGATGGCGCCCATCACGCTCGCCATCCTTAACGGCGACGCGACCTTCGGCGTGTCGCTCCACA TCATCGATGCCGGGATCGACACGGGAGCCCTCGTGGATCAGGAGACCTTCGCGATCGAGGGCCGATCCAATCGCGAGGTC TACAGCCTCTGCGAGCAGGCCGGCGTGCGACTGATCGAGCGGAACGCGGCCATATTCGGGGCCGTCACCGCGACGCGCGG CCTGTCGGGTATGGCCACCGTCCAAGACGACGCGGCGGCGACCTATTTCAGCAAGACGGATATCGACTACGCGCGGACAG AGATCGACTTCAACCGAACGGCGGCCCAGATCGACCGGCACGTGCGCGCCTACCTGTTCCCGCCCAACCTGTACGCGCGA ATCACGGTCAGCGATCGGCGCTTCCGGGTCTTGCAGCCTCCGGAGGTCGGCGCGCGCTGCACGGATCGCAAACCCGGTCT GGTAGTGCAGAGCGATCCGCTGACCGTGACGACGCGCGACCGGATCCTGATCTTCAGACAGACAGAAGAAGATGCCTGA
Upstream 100 bases:
>100_bases TTGCCGGCGCTTGACGATTTGATTTCGATGAAATTGATGATGATCACGGCACGCAGCCCGCGCGAACAATGTAGCAACGA CACTCAGTGATCCAGTAGCG
Downstream 100 bases:
>100_bases GCGCATGTCGAAGCCCACCCTGTTGCTGATGGATGTCTTCGGCATCCTCGATGCGAGCCGCAGCGGGCTTATCGACGCCT TCGCGGCGGCCGGATGCGAC
Product: formyl transferase domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 292; Mature: 291
Protein sequence:
>292_residues MSKTPSILVCGKNKVCADTLEVLRRELPDHTIVYVFADKDETSARVARDVAHRLGIESRGVRNAEAFARTYFEIDPTLLL SVQFSIILRHDIIEHGGDRLINLHFSPLPRYRGMAPITLAILNGDATFGVSLHIIDAGIDTGALVDQETFAIEGRSNREV YSLCEQAGVRLIERNAAIFGAVTATRGLSGMATVQDDAAATYFSKTDIDYARTEIDFNRTAAQIDRHVRAYLFPPNLYAR ITVSDRRFRVLQPPEVGARCTDRKPGLVVQSDPLTVTTRDRILIFRQTEEDA
Sequences:
>Translated_292_residues MSKTPSILVCGKNKVCADTLEVLRRELPDHTIVYVFADKDETSARVARDVAHRLGIESRGVRNAEAFARTYFEIDPTLLL SVQFSIILRHDIIEHGGDRLINLHFSPLPRYRGMAPITLAILNGDATFGVSLHIIDAGIDTGALVDQETFAIEGRSNREV YSLCEQAGVRLIERNAAIFGAVTATRGLSGMATVQDDAAATYFSKTDIDYARTEIDFNRTAAQIDRHVRAYLFPPNLYAR ITVSDRRFRVLQPPEVGARCTDRKPGLVVQSDPLTVTTRDRILIFRQTEEDA >Mature_291_residues SKTPSILVCGKNKVCADTLEVLRRELPDHTIVYVFADKDETSARVARDVAHRLGIESRGVRNAEAFARTYFEIDPTLLLS VQFSIILRHDIIEHGGDRLINLHFSPLPRYRGMAPITLAILNGDATFGVSLHIIDAGIDTGALVDQETFAIEGRSNREVY SLCEQAGVRLIERNAAIFGAVTATRGLSGMATVQDDAAATYFSKTDIDYARTEIDFNRTAAQIDRHVRAYLFPPNLYARI TVSDRRFRVLQPPEVGARCTDRKPGLVVQSDPLTVTTRDRILIFRQTEEDA
Specific function: Modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by:(I) promoting its recognition by IF2 and (II) impairing its binding to EFTu-
COG id: COG0223
COG function: function code J; Methionyl-tRNA formyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the fmt family [H]
Homologues:
Organism=Escherichia coli, GI1789683, Length=298, Percent_Identity=26.1744966442953, Blast_Score=80, Evalue=1e-16,
Paralogues:
None
Copy number: 400 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005794 - InterPro: IPR005793 - InterPro: IPR002376 - InterPro: IPR011034 - InterPro: IPR001555 - InterPro: IPR015518 [H]
Pfam domain/function: PF02911 Formyl_trans_C; PF00551 Formyl_trans_N [H]
EC number: =2.1.2.9 [H]
Molecular weight: Translated: 32533; Mature: 32402
Theoretical pI: Translated: 6.63; Mature: 6.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKTPSILVCGKNKVCADTLEVLRRELPDHTIVYVFADKDETSARVARDVAHRLGIESRG CCCCCCEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCC VRNAEAFARTYFEIDPTLLLSVQFSIILRHDIIEHGGDRLINLHFSPLPRYRGMAPITLA CCCHHHHHHHHEECCCEEEEEEEEEEHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEEEE ILNGDATFGVSLHIIDAGIDTGALVDQETFAIEGRSNREVYSLCEQAGVRLIERNAAIFG EEECCCEEEEEEEEEECCCCCCCEECCCEEEEECCCCCHHHHHHHHHCCEEEECCCEEEE AVTATRGLSGMATVQDDAAATYFSKTDIDYARTEIDFNRTAAQIDRHVRAYLFPPNLYAR EEHHHCCCCCCEEECCCCCEEEEECCCCCHHHEEECCCHHHHHHHHCEEEEEECCCCEEE ITVSDRRFRVLQPPEVGARCTDRKPGLVVQSDPLTVTTRDRILIFRQTEEDA EEECCCEEEEECCCCCCCCCCCCCCCEEEECCCEEEEECCEEEEEEECCCCC >Mature Secondary Structure SKTPSILVCGKNKVCADTLEVLRRELPDHTIVYVFADKDETSARVARDVAHRLGIESRG CCCCCEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCC VRNAEAFARTYFEIDPTLLLSVQFSIILRHDIIEHGGDRLINLHFSPLPRYRGMAPITLA CCCHHHHHHHHEECCCEEEEEEEEEEHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEEEE ILNGDATFGVSLHIIDAGIDTGALVDQETFAIEGRSNREVYSLCEQAGVRLIERNAAIFG EEECCCEEEEEEEEEECCCCCCCEECCCEEEEECCCCCHHHHHHHHHCCEEEECCCEEEE AVTATRGLSGMATVQDDAAATYFSKTDIDYARTEIDFNRTAAQIDRHVRAYLFPPNLYAR EEHHHCCCCCCEEECCCCCEEEEECCCCCHHHEEECCCHHHHHHHHCEEEEEECCCCEEE ITVSDRRFRVLQPPEVGARCTDRKPGLVVQSDPLTVTTRDRILIFRQTEEDA EEECCCEEEEECCCCCCCCCCCCCCCEEEECCCEEEEECCEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA