Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
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Accession | NC_010505 |
Length | 6,077,833 |
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The map label for this gene is 170746466
Identifier: 170746466
GI number: 170746466
Start: 18880
End: 20181
Strand: Reverse
Name: 170746466
Synonym: Mrad2831_0016
Alternate gene names: NA
Gene position: 20181-18880 (Counterclockwise)
Preceding gene: 170746467
Following gene: 170746465
Centisome position: 0.33
GC content: 64.82
Gene sequence:
>1302_bases ATGTCGAAGCCCACCCTGTTGCTGATGGATGTCTTCGGCATCCTCGATGCGAGCCGCAGCGGGCTTATCGACGCCTTCGC GGCGGCCGGATGCGACGTCGTCGTCGCGAACTTTGCCTATACCCACCTCAGCCAGTCGGAGGAGCTTTCCGAGACCCTGC TCGCCTTCTTGGAGGCCGACGGCGTTGCGATCGACGGCGCCCTGAGCATCAATGCGGTCGGGCTTTCCGCGCCGATCTAT GAGGGTCTCGCGCGGCGCGGCGCGGCGCACGCGGCGTGGTTCGTCGACAGCCCCTTCTACTTCTCCGGCCTTGAGATCCC CGAGAGCGTATTGCTGAGCGTCGCGTGCAGCAACTTCGCAGAGCATCCGCAGGCGACCCGGGCCGACTGGCTGCCCTTCG CGGGCTTCGAGCCCCGGCCATCCCAGAACCGAGCCGCGACCTCGGTCGGCTTCCTCGGGTCGCTGCATCACATCGCGCTC TACGCGGCGCGCTCGCAGGACGGCCTCGTCGGTTCCCGCACCGGCCCTCTCCCGGTGGGGGTCGAGCTCCGTGATCGTAT GCGTTCGCCATTCTTCATGATCGACGAGACGTGGAGTCTACCCGACGGCACGCCGGTCAACGCGATGGAGTACTTCAATT TCCAGTCATCGATGCACCGACTGGAACTCCTCTCCTACTTCTCGGCGACCGATCTGGAGATCCAAGGACCGCCGAGCTGG TACAAGGAACTCTGGACGGCAGCCCCTCACCTCCTTCACAAGTTTTCCGTGAACAGCGTCGCCGGCGAGCGGGAGATGCG GGCCTACATGGCCCGCTACCGCATCTGCCTGAATATCTTTCACATTCAGAATATGAACGGTGGCCCGAACTTCAGAAGCT TCGACGCCGCTTCGCACGGCGTCCCGTGCCTGTCCCAATATAACCGCGACTGCACCGCCCTCTTCCCGCACGGTGAGGCG GCCCTGTACTTTAATAACCCTGCCGAGGCGCTTCATCTACATCGGGAGCTCGACGGCAGTAGTCGGCTGAGACAGAAGCT CGCGGCGGCAGCCGCGCGGGTCGTTCGCGACGGGAACACGTTCAGCCATCGCGCCAGCCGCTTCCTCAAAACGCTGGCGC TAAGACAGCGGGCCGGTACCGCCAGGGGCACAATCCGGCATCTGCGCTGGCAGGATGGCTGGACCGCCGAGCCGGAGGAT GCAGCGCTGGCGGCAGCAGCTTCTCCGGAGCCTTCGCAGGCCGGAAGAGAGTTCCTGGCCCGAAATCCCATCCGTCGCTT CTTCGAACGGGCGCGCCGCTAA
Upstream 100 bases:
>100_bases GATCGCAAACCCGGTCTGGTAGTGCAGAGCGATCCGCTGACCGTGACGACGCGCGACCGGATCCTGATCTTCAGACAGAC AGAAGAAGATGCCTGAGCGC
Downstream 100 bases:
>100_bases CGCGCGCCGCCGCGCGCGCATTTCGAATCCGCGCGCGGGCCGTTCCACACGGGCAAATCCACAAACCACGTGAACCGATC GGCCGCGGCCCATATAGACT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 433; Mature: 432
Protein sequence:
>433_residues MSKPTLLLMDVFGILDASRSGLIDAFAAAGCDVVVANFAYTHLSQSEELSETLLAFLEADGVAIDGALSINAVGLSAPIY EGLARRGAAHAAWFVDSPFYFSGLEIPESVLLSVACSNFAEHPQATRADWLPFAGFEPRPSQNRAATSVGFLGSLHHIAL YAARSQDGLVGSRTGPLPVGVELRDRMRSPFFMIDETWSLPDGTPVNAMEYFNFQSSMHRLELLSYFSATDLEIQGPPSW YKELWTAAPHLLHKFSVNSVAGEREMRAYMARYRICLNIFHIQNMNGGPNFRSFDAASHGVPCLSQYNRDCTALFPHGEA ALYFNNPAEALHLHRELDGSSRLRQKLAAAAARVVRDGNTFSHRASRFLKTLALRQRAGTARGTIRHLRWQDGWTAEPED AALAAAASPEPSQAGREFLARNPIRRFFERARR
Sequences:
>Translated_433_residues MSKPTLLLMDVFGILDASRSGLIDAFAAAGCDVVVANFAYTHLSQSEELSETLLAFLEADGVAIDGALSINAVGLSAPIY EGLARRGAAHAAWFVDSPFYFSGLEIPESVLLSVACSNFAEHPQATRADWLPFAGFEPRPSQNRAATSVGFLGSLHHIAL YAARSQDGLVGSRTGPLPVGVELRDRMRSPFFMIDETWSLPDGTPVNAMEYFNFQSSMHRLELLSYFSATDLEIQGPPSW YKELWTAAPHLLHKFSVNSVAGEREMRAYMARYRICLNIFHIQNMNGGPNFRSFDAASHGVPCLSQYNRDCTALFPHGEA ALYFNNPAEALHLHRELDGSSRLRQKLAAAAARVVRDGNTFSHRASRFLKTLALRQRAGTARGTIRHLRWQDGWTAEPED AALAAAASPEPSQAGREFLARNPIRRFFERARR >Mature_432_residues SKPTLLLMDVFGILDASRSGLIDAFAAAGCDVVVANFAYTHLSQSEELSETLLAFLEADGVAIDGALSINAVGLSAPIYE GLARRGAAHAAWFVDSPFYFSGLEIPESVLLSVACSNFAEHPQATRADWLPFAGFEPRPSQNRAATSVGFLGSLHHIALY AARSQDGLVGSRTGPLPVGVELRDRMRSPFFMIDETWSLPDGTPVNAMEYFNFQSSMHRLELLSYFSATDLEIQGPPSWY KELWTAAPHLLHKFSVNSVAGEREMRAYMARYRICLNIFHIQNMNGGPNFRSFDAASHGVPCLSQYNRDCTALFPHGEAA LYFNNPAEALHLHRELDGSSRLRQKLAAAAARVVRDGNTFSHRASRFLKTLALRQRAGTARGTIRHLRWQDGWTAEPEDA ALAAAASPEPSQAGREFLARNPIRRFFERARR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47788; Mature: 47657
Theoretical pI: Translated: 7.24; Mature: 7.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKPTLLLMDVFGILDASRSGLIDAFAAAGCDVVVANFAYTHLSQSEELSETLLAFLEAD CCCCCEEHHHHHHHHHCCCCCHHHHHHHCCCCEEEHHHHHHHHCCHHHHHHHHHHHHHCC GVAIDGALSINAVGLSAPIYEGLARRGAAHAAWFVDSPFYFSGLEIPESVLLSVACSNFA CEEECCEEEEEEECCCCHHHHHHHHCCCCCEEEEECCCCEECCCCCHHHHHHHHHHHHHH EHPQATRADWLPFAGFEPRPSQNRAATSVGFLGSLHHIALYAARSQDGLVGSRTGPLPVG CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCC VELRDRMRSPFFMIDETWSLPDGTPVNAMEYFNFQSSMHRLELLSYFSATDLEIQGPPSW HHHHHHHCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHH YKELWTAAPHLLHKFSVNSVAGEREMRAYMARYRICLNIFHIQNMNGGPNFRSFDAASHG HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCC VPCLSQYNRDCTALFPHGEAALYFNNPAEALHLHRELDGSSRLRQKLAAAAARVVRDGNT CCHHHHCCCCCEEECCCCCEEEEECCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCH FSHRASRFLKTLALRQRAGTARGTIRHLRWQDGWTAEPEDAALAAAASPEPSQAGREFLA HHHHHHHHHHHHHHHHHCCCHHHHHHHEEECCCCCCCCCCCCEEECCCCCHHHHHHHHHH RNPIRRFFERARR CCHHHHHHHHHCC >Mature Secondary Structure SKPTLLLMDVFGILDASRSGLIDAFAAAGCDVVVANFAYTHLSQSEELSETLLAFLEAD CCCCEEHHHHHHHHHCCCCCHHHHHHHCCCCEEEHHHHHHHHCCHHHHHHHHHHHHHCC GVAIDGALSINAVGLSAPIYEGLARRGAAHAAWFVDSPFYFSGLEIPESVLLSVACSNFA CEEECCEEEEEEECCCCHHHHHHHHCCCCCEEEEECCCCEECCCCCHHHHHHHHHHHHHH EHPQATRADWLPFAGFEPRPSQNRAATSVGFLGSLHHIALYAARSQDGLVGSRTGPLPVG CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCC VELRDRMRSPFFMIDETWSLPDGTPVNAMEYFNFQSSMHRLELLSYFSATDLEIQGPPSW HHHHHHHCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHH YKELWTAAPHLLHKFSVNSVAGEREMRAYMARYRICLNIFHIQNMNGGPNFRSFDAASHG HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCC VPCLSQYNRDCTALFPHGEAALYFNNPAEALHLHRELDGSSRLRQKLAAAAARVVRDGNT CCHHHHCCCCCEEECCCCCEEEEECCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCH FSHRASRFLKTLALRQRAGTARGTIRHLRWQDGWTAEPEDAALAAAASPEPSQAGREFLA HHHHHHHHHHHHHHHHHCCCHHHHHHHEEECCCCCCCCCCCCEEECCCCCHHHHHHHHHH RNPIRRFFERARR CCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA