| Definition | Escherichia coli SMS-3-5 chromosome, complete genome. |
|---|---|
| Accession | NC_010498 |
| Length | 5,068,389 |
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The map label for this gene is bisC [H]
Identifier: 170681133
GI number: 170681133
Start: 3940209
End: 3942542
Strand: Reverse
Name: bisC [H]
Synonym: EcSMS35_3871
Alternate gene names: 170681133
Gene position: 3942542-3940209 (Counterclockwise)
Preceding gene: 170680625
Following gene: 170681569
Centisome position: 77.79
GC content: 54.76
Gene sequence:
>2334_bases TTGGCCAACTCATCCTCACGATATTCCGTTCTGACTGCCGCCCACTGGGGGCCTATGCTGGTTGAAACCGACGGCGAAAC CGTGTTTAGCTCGCGTGGCGCGTTAGCCACAGGAATGGAAAACTCCTTGCAGAGCGCGGTTCGCGACCAGGTTCACAGCA ATACGCGGGTGCGATTTCCAATGGTGCGCAAAGGCTTTCTTGCGTCACCGGAAAATCCGCAAGGCATTCGTGGGCAGGAT GAATTTGTTCGCGTGAGTTGGGATGAGGCGCTGGAGCTTATTCACCATCAACATAAACGCATTCGTGAGGCTTATGGTCC GGCATCGATTTTTGCGGGTTCCTACGGCTGGCGTTCAAACGGCGTGCTGCATAAGGCCTCGACATTATTACAACGCTATA TGGCGCTGGCAGGCGGTTATACTGGGCATCTGGGGGATTATTCGACCGGCGCGGCACAGGCGATCATGCCGTATGTCGTG GGGGGCAGCGAAGTTTATCAACAGCAAACCAGTTGGCCGCTGGTGCTGGAACATAGCGATGTCGTGGTGCTGTGGAGTGC TAACCCACTCAATACGCTGAAAATTGCGTGGAATGCATCCGATGAGCAGGGGCTTTCTTACTTTTCCGCACTGCGTGACA GCGGGAAAAAGCTGATCTGCATTGATCCAATGCGATCGGAAACCGTCGATTTCTTTGGCGATAAAATGGAATGGGTGGCA CCGCACATGGGCACCGATGTTGCGCTGATGCTGGGGATCGCCTATACGCTGGTGGAAAATGGTTGGCACGACGAAGCGTT TCTGGCGCGTTGCACCACAGGTTATGCCGTCTTCGCCTCTTATTTGCTGGGCGAGAGTGACGGAATAGCGAAAAACGCCG AATGGGCGGCAGAGATTTGTGGTGTTGGCGCAGCGAAAATCCGCGAGCTGGCGGCTCTTTTCCACCAAAATACCACCATG CTGATGGCTGGCTGGGGAATGCAACGTCAACAGTTTGGCGAGCAAAAGCACTGGATGATCGTCACGCTGGCGGCAATGTT GGGGCAAATCGGCACACCCGGCGGCGGTTTTGGTCTTTCTTACCATTTTGCCAATGGTGGTAACCCCACGCGCCGCGCTG CGGTGCTCTCTTCCATGCAGGGTAGCTTGCCTGGCGGCACCGATGCGGTGGATAAAATCCCTGTTGCCCGCATTGTTGAA GCACTGGAAAACCCCGGTGGCGCATATCAACATAACGGTATGGACCGACATTTCCCGGATATTCGTTTTATCTGGTGGGC GGGCGGTGCCAACTTTACTCATCATCAGGATACCAATCGCCTGATCCGTGCCTGGCAAAAACCGGAGCTGGTGGTGATCT CTGAATGCTTCTGGACGGCTGCGGCGAAACACGCGGATATCGTTCTGCCTGCGACCACTTCGTTTGAGCGTAATGATCTC ACCATGACCGGCGATTACAGTAATCAGCATCTGGTGCCGATGAAGCAAGTGGTGCCTCCACGTTATGAAGCGCGTAATGA TTTTGATGTCTTTGCCGAGTTGAGTGAACGTTGGGAGAAGGGCGGCTATGCGCGGTTTACGGAAGGAAAAAGTGAGCTGC AATGGCTGGAAACGTTTTATAACGTTGCCCGGCAGCGCGGGGCAAGCCAGCAGGTTGAATTGCCGCCATTTGCTGAGTTC TGGGAAGCCAACCAGTTAATTGAGATGCCGGAAAACCCGGACAGCGAGCGGTTTATTCGCTTCGCCGATTTTCGCCGCGA TCCGCAGGCGCATCCATTAAAAACCGCCAGCGGTAAGATTGAAATCTTCTCGCAGCGTATTGCCGATTACGCTTATCCGG ATTGCCCTGGGCATCCAATGTGGCTGGAGCCGGACGAATGGCAGGGCAATGCCGAACCGGAACAGTTGCAGGTACTTTCT GCTCATCCGGCACATCGTCTGCACAGCCAGCTGAATTACAGTTCTCTGCGCGAATTGTACGCGGTGGCAAATCGTGAGCC TGTCACCATTCATCCTGACGATGCCCAGGCGCGCGGCATACAAGATGGCGATATTGTTCGGTTGTGGAACGCACGCGGGC AAATTCTTGCCGGAGCGGTCATTAGCGAGGGAATTAAACCTGGCGTGATTTGCATTCATGAAGGGGCATGGCCGGATCTG GATTTAACCGCTGACGGTATTTGTAAAAACGGCGCGGTGAACGTTCTGACCAAAGATCTCCGCAGCTCGCGGCTGGGGAA TGGCTGTGCGGGTAATACGGCGCTGGCATGGCTGGAAAAATACAACGGTCCGGAACTGACACTTACAGCGTTTGAACCAC CGGCCAGCTCATAA
Upstream 100 bases:
>100_bases ATTATGCCGCGTGAACATGAAGATTATTCCTGGGAATACTCGGAAATTTGTAAGTAATATTTAACTGCTCAATACATCTA ACCTTTCAGGAGTCTTCGGT
Downstream 100 bases:
>100_bases TCCAGGTGGGTAGTTGGGTTTCATCTTGCCATGCGCAGTCGACAATGTGAAAACCCTGCGCATGGTAAAAATCTATCGCC GGTTGATTTTTTTGATAAAC
Product: biotin sulfoxide reductase
Products: Biotin. [C]
Alternate protein names: BDS reductase; BSO reductase [H]
Number of amino acids: Translated: 777; Mature: 776
Protein sequence:
>777_residues MANSSSRYSVLTAAHWGPMLVETDGETVFSSRGALATGMENSLQSAVRDQVHSNTRVRFPMVRKGFLASPENPQGIRGQD EFVRVSWDEALELIHHQHKRIREAYGPASIFAGSYGWRSNGVLHKASTLLQRYMALAGGYTGHLGDYSTGAAQAIMPYVV GGSEVYQQQTSWPLVLEHSDVVVLWSANPLNTLKIAWNASDEQGLSYFSALRDSGKKLICIDPMRSETVDFFGDKMEWVA PHMGTDVALMLGIAYTLVENGWHDEAFLARCTTGYAVFASYLLGESDGIAKNAEWAAEICGVGAAKIRELAALFHQNTTM LMAGWGMQRQQFGEQKHWMIVTLAAMLGQIGTPGGGFGLSYHFANGGNPTRRAAVLSSMQGSLPGGTDAVDKIPVARIVE ALENPGGAYQHNGMDRHFPDIRFIWWAGGANFTHHQDTNRLIRAWQKPELVVISECFWTAAAKHADIVLPATTSFERNDL TMTGDYSNQHLVPMKQVVPPRYEARNDFDVFAELSERWEKGGYARFTEGKSELQWLETFYNVARQRGASQQVELPPFAEF WEANQLIEMPENPDSERFIRFADFRRDPQAHPLKTASGKIEIFSQRIADYAYPDCPGHPMWLEPDEWQGNAEPEQLQVLS AHPAHRLHSQLNYSSLRELYAVANREPVTIHPDDAQARGIQDGDIVRLWNARGQILAGAVISEGIKPGVICIHEGAWPDL DLTADGICKNGAVNVLTKDLRSSRLGNGCAGNTALAWLEKYNGPELTLTAFEPPASS
Sequences:
>Translated_777_residues MANSSSRYSVLTAAHWGPMLVETDGETVFSSRGALATGMENSLQSAVRDQVHSNTRVRFPMVRKGFLASPENPQGIRGQD EFVRVSWDEALELIHHQHKRIREAYGPASIFAGSYGWRSNGVLHKASTLLQRYMALAGGYTGHLGDYSTGAAQAIMPYVV GGSEVYQQQTSWPLVLEHSDVVVLWSANPLNTLKIAWNASDEQGLSYFSALRDSGKKLICIDPMRSETVDFFGDKMEWVA PHMGTDVALMLGIAYTLVENGWHDEAFLARCTTGYAVFASYLLGESDGIAKNAEWAAEICGVGAAKIRELAALFHQNTTM LMAGWGMQRQQFGEQKHWMIVTLAAMLGQIGTPGGGFGLSYHFANGGNPTRRAAVLSSMQGSLPGGTDAVDKIPVARIVE ALENPGGAYQHNGMDRHFPDIRFIWWAGGANFTHHQDTNRLIRAWQKPELVVISECFWTAAAKHADIVLPATTSFERNDL TMTGDYSNQHLVPMKQVVPPRYEARNDFDVFAELSERWEKGGYARFTEGKSELQWLETFYNVARQRGASQQVELPPFAEF WEANQLIEMPENPDSERFIRFADFRRDPQAHPLKTASGKIEIFSQRIADYAYPDCPGHPMWLEPDEWQGNAEPEQLQVLS AHPAHRLHSQLNYSSLRELYAVANREPVTIHPDDAQARGIQDGDIVRLWNARGQILAGAVISEGIKPGVICIHEGAWPDL DLTADGICKNGAVNVLTKDLRSSRLGNGCAGNTALAWLEKYNGPELTLTAFEPPASS >Mature_776_residues ANSSSRYSVLTAAHWGPMLVETDGETVFSSRGALATGMENSLQSAVRDQVHSNTRVRFPMVRKGFLASPENPQGIRGQDE FVRVSWDEALELIHHQHKRIREAYGPASIFAGSYGWRSNGVLHKASTLLQRYMALAGGYTGHLGDYSTGAAQAIMPYVVG GSEVYQQQTSWPLVLEHSDVVVLWSANPLNTLKIAWNASDEQGLSYFSALRDSGKKLICIDPMRSETVDFFGDKMEWVAP HMGTDVALMLGIAYTLVENGWHDEAFLARCTTGYAVFASYLLGESDGIAKNAEWAAEICGVGAAKIRELAALFHQNTTML MAGWGMQRQQFGEQKHWMIVTLAAMLGQIGTPGGGFGLSYHFANGGNPTRRAAVLSSMQGSLPGGTDAVDKIPVARIVEA LENPGGAYQHNGMDRHFPDIRFIWWAGGANFTHHQDTNRLIRAWQKPELVVISECFWTAAAKHADIVLPATTSFERNDLT MTGDYSNQHLVPMKQVVPPRYEARNDFDVFAELSERWEKGGYARFTEGKSELQWLETFYNVARQRGASQQVELPPFAEFW EANQLIEMPENPDSERFIRFADFRRDPQAHPLKTASGKIEIFSQRIADYAYPDCPGHPMWLEPDEWQGNAEPEQLQVLSA HPAHRLHSQLNYSSLRELYAVANREPVTIHPDDAQARGIQDGDIVRLWNARGQILAGAVISEGIKPGVICIHEGAWPDLD LTADGICKNGAVNVLTKDLRSSRLGNGCAGNTALAWLEKYNGPELTLTAFEPPASS
Specific function: This enzyme may serve as a scavenger, allowing the cell to utilize biotin sulfoxide as a biotin source. It reduces a spontaneous oxidation product of biotin, D-biotin D-sulfoxide (BSO or BDS), back to biotin [H]
COG id: COG0243
COG function: function code C; Anaerobic dehydrogenases, typically selenocysteine-containing
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the prokaryotic molybdopterin-containing oxidoreductase family [H]
Homologues:
Organism=Escherichia coli, GI145693196, Length=777, Percent_Identity=98.0694980694981, Blast_Score=1587, Evalue=0.0, Organism=Escherichia coli, GI87081994, Length=773, Percent_Identity=63.3893919793014, Blast_Score=1056, Evalue=0.0, Organism=Escherichia coli, GI1787231, Length=790, Percent_Identity=42.7848101265823, Blast_Score=602, Evalue=1e-173, Organism=Escherichia coli, GI87081797, Length=757, Percent_Identity=32.4966974900925, Blast_Score=310, Evalue=3e-85, Organism=Escherichia coli, GI1787870, Length=753, Percent_Identity=30.6772908366534, Blast_Score=298, Evalue=1e-81, Organism=Escherichia coli, GI171474008, Length=753, Percent_Identity=30.4116865869854, Blast_Score=279, Evalue=4e-76, Organism=Escherichia coli, GI3868721, Length=474, Percent_Identity=23.4177215189873, Blast_Score=102, Evalue=7e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009010 - InterPro: IPR006658 - InterPro: IPR006657 - InterPro: IPR006656 - InterPro: IPR006655 [H]
Pfam domain/function: PF00384 Molybdopterin; PF01568 Molydop_binding [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 85993; Mature: 85861
Theoretical pI: Translated: 5.89; Mature: 5.89
Prosite motif: PS00490 MOLYBDOPTERIN_PROK_2 ; PS00932 MOLYBDOPTERIN_PROK_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANSSSRYSVLTAAHWGPMLVETDGETVFSSRGALATGMENSLQSAVRDQVHSNTRVRFP CCCCCCCEEEEEEECCCCEEEECCCCCEECCCCCCHHCHHHHHHHHHHHHHHCCCEEEEH MVRKGFLASPENPQGIRGQDEFVRVSWDEALELIHHQHKRIREAYGPASIFAGSYGWRSN HHHCCCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHCCCHHHEECCCCCCCC GVLHKASTLLQRYMALAGGYTGHLGDYSTGAAQAIMPYVVGGSEVYQQQTSWPLVLEHSD CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHEECCHHHHHHCCCCCEEEECCC VVVLWSANPLNTLKIAWNASDEQGLSYFSALRDSGKKLICIDPMRSETVDFFGDKMEWVA EEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHCCCHHHHC PHMGTDVALMLGIAYTLVENGWHDEAFLARCTTGYAVFASYLLGESDGIAKNAEWAAEIC CCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH GVGAAKIRELAALFHQNTTMLMAGWGMQRQQFGEQKHWMIVTLAAMLGQIGTPGGGFGLS CCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCEE YHFANGGNPTRRAAVLSSMQGSLPGGTDAVDKIPVARIVEALENPGGAYQHNGMDRHFPD EEECCCCCHHHHHHHHHHHCCCCCCCCCHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCC IRFIWWAGGANFTHHQDTNRLIRAWQKPELVVISECFWTAAAKHADIVLPATTSFERNDL EEEEEEECCCCCCCCCHHHHHHHHCCCCCEEEEEHHHHHHHCCCCCEEEECCCCCCCCCC TMTGDYSNQHLVPMKQVVPPRYEARNDFDVFAELSERWEKGGYARFTEGKSELQWLETFY EEECCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHH NVARQRGASQQVELPPFAEFWEANQLIEMPENPDSERFIRFADFRRDPQAHPLKTASGKI HHHHHCCCCCCCCCCCHHHHHCCCCEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCH EIFSQRIADYAYPDCPGHPMWLEPDEWQGNAEPEQLQVLSAHPAHRLHSQLNYSSLRELY HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHEEEECCCCHHHHHHHCCHHHHHHHH AVANREPVTIHPDDAQARGIQDGDIVRLWNARGQILAGAVISEGIKPGVICIHEGAWPDL HHCCCCCEEECCCCHHHCCCCCCCEEEEECCCCCEEEHHHHHCCCCCCEEEEECCCCCCC DLTADGICKNGAVNVLTKDLRSSRLGNGCAGNTALAWLEKYNGPELTLTAFEPPASS CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCEEEEEECCCCCCC >Mature Secondary Structure ANSSSRYSVLTAAHWGPMLVETDGETVFSSRGALATGMENSLQSAVRDQVHSNTRVRFP CCCCCCEEEEEEECCCCEEEECCCCCEECCCCCCHHCHHHHHHHHHHHHHHCCCEEEEH MVRKGFLASPENPQGIRGQDEFVRVSWDEALELIHHQHKRIREAYGPASIFAGSYGWRSN HHHCCCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHCCCHHHEECCCCCCCC GVLHKASTLLQRYMALAGGYTGHLGDYSTGAAQAIMPYVVGGSEVYQQQTSWPLVLEHSD CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHEECCHHHHHHCCCCCEEEECCC VVVLWSANPLNTLKIAWNASDEQGLSYFSALRDSGKKLICIDPMRSETVDFFGDKMEWVA EEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHCCCHHHHC PHMGTDVALMLGIAYTLVENGWHDEAFLARCTTGYAVFASYLLGESDGIAKNAEWAAEIC CCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH GVGAAKIRELAALFHQNTTMLMAGWGMQRQQFGEQKHWMIVTLAAMLGQIGTPGGGFGLS CCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCEE YHFANGGNPTRRAAVLSSMQGSLPGGTDAVDKIPVARIVEALENPGGAYQHNGMDRHFPD EEECCCCCHHHHHHHHHHHCCCCCCCCCHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCC IRFIWWAGGANFTHHQDTNRLIRAWQKPELVVISECFWTAAAKHADIVLPATTSFERNDL EEEEEEECCCCCCCCCHHHHHHHHCCCCCEEEEEHHHHHHHCCCCCEEEECCCCCCCCCC TMTGDYSNQHLVPMKQVVPPRYEARNDFDVFAELSERWEKGGYARFTEGKSELQWLETFY EEECCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHH NVARQRGASQQVELPPFAEFWEANQLIEMPENPDSERFIRFADFRRDPQAHPLKTASGKI HHHHHCCCCCCCCCCCHHHHHCCCCEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCH EIFSQRIADYAYPDCPGHPMWLEPDEWQGNAEPEQLQVLSAHPAHRLHSQLNYSSLRELY HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHEEEECCCCHHHHHHHCCHHHHHHHH AVANREPVTIHPDDAQARGIQDGDIVRLWNARGQILAGAVISEGIKPGVICIHEGAWPDL HHCCCCCEEECCCCHHHCCCCCCCEEEEECCCCCEEEHHHHHCCCCCCEEEEECCCCCCC DLTADGICKNGAVNVLTKDLRSSRLGNGCAGNTALAWLEKYNGPELTLTAFEPPASS CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: A Spontaneous Oxidation Product Of Biotin, D-Biotin D-Sulfoxide (Bso Or Bds), [C]
Specific reaction: Reduces A Spontaneous Oxidation Product Of Biotin, D-Biotin D-Sulfoxide (Bso Or Bds), Back To Biotin. [C]
General reaction: Reduction [C]
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2180922; 8041620; 9278503 [H]