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The map label for this gene is yhjY [H]

Identifier: 170681569

GI number: 170681569

Start: 3938384

End: 3939082

Strand: Reverse

Name: yhjY [H]

Synonym: EcSMS35_3869

Alternate gene names: 170681569

Gene position: 3939082-3938384 (Counterclockwise)

Preceding gene: 170681133

Following gene: 170682261

Centisome position: 77.72

GC content: 49.64

Gene sequence:

>699_bases
ATGATCATAAAAAAAAGCGGTGGTCGCTGGCAGCTAAGCCTGCTGGTGAGCGTGGTAATCAGTGCCTTTTTTCTCAACAC
AGCTTACGCCTGGCAACAAGAATATATCGTTGATACGCAACCCGGACATTCCACAGAGCGTTACACCTGGGATAGCGATC
ATCAACCTGATTACAACGATATTTTGTCGCAACGTATTCAAAGTAGCCAAAGGGCGCTGGGACTGGAAGTCAATCTGGCG
GAAGAAACCCCTGTGGATGTCACCAGTAGTATGAGTATGGGGTGGAATTTTCCTTTATATCAACAGGTTACAACCGGTCC
GGTCGCGGCATTACATTACGATGGCACAACCACCTCGATGTATAACGAGTTTGGCGACAGTACTACCACGCTGACCGATC
CGTTATGGCATGCCAGCGTGAGTACTTTAGGCTGGCGTGTTGACTCCCGGCTTGGCGATCTCCGACCCTGGGCGCAAATC
AGCTATAACCAGCAATTTGGCGAGAATATCTGGAAGGCGCAATCAGGCCTGAGCCGGATGACGGCGACAAACCAGAACGG
CAACTGGCTGGATGTCACCGTAGGCGCTGATATGTTGCTCAATCAAAATATTGCTGCCTATGCGGCGCTATCTCAGGCAG
AAAATACCACTAACAATAGCGACTATCTGTATACGATGGGGGTTAGTGCCAGATTTTAA

Upstream 100 bases:

>100_bases
GGTGAAAAAGTCAATATTTAATACAGGGCTACTATGCCCGATATCCTTCATACAATGACAATAATATTGCCGAATTCGGC
TCTTCCCTGGAGTCGTGTTA

Downstream 100 bases:

>100_bases
CGTTATAGATACAATTGAAACCCATAAATAACAACTAATGTGGCGATAGTGGGGACTAACTTACTAAATAATAAATTTGG
CGAATAATTGTCGAGTCATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 232; Mature: 232

Protein sequence:

>232_residues
MIIKKSGGRWQLSLLVSVVISAFFLNTAYAWQQEYIVDTQPGHSTERYTWDSDHQPDYNDILSQRIQSSQRALGLEVNLA
EETPVDVTSSMSMGWNFPLYQQVTTGPVAALHYDGTTTSMYNEFGDSTTTLTDPLWHASVSTLGWRVDSRLGDLRPWAQI
SYNQQFGENIWKAQSGLSRMTATNQNGNWLDVTVGADMLLNQNIAAYAALSQAENTTNNSDYLYTMGVSARF

Sequences:

>Translated_232_residues
MIIKKSGGRWQLSLLVSVVISAFFLNTAYAWQQEYIVDTQPGHSTERYTWDSDHQPDYNDILSQRIQSSQRALGLEVNLA
EETPVDVTSSMSMGWNFPLYQQVTTGPVAALHYDGTTTSMYNEFGDSTTTLTDPLWHASVSTLGWRVDSRLGDLRPWAQI
SYNQQFGENIWKAQSGLSRMTATNQNGNWLDVTVGADMLLNQNIAAYAALSQAENTTNNSDYLYTMGVSARF
>Mature_232_residues
MIIKKSGGRWQLSLLVSVVISAFFLNTAYAWQQEYIVDTQPGHSTERYTWDSDHQPDYNDILSQRIQSSQRALGLEVNLA
EETPVDVTSSMSMGWNFPLYQQVTTGPVAALHYDGTTTSMYNEFGDSTTTLTDPLWHASVSTLGWRVDSRLGDLRPWAQI
SYNQQFGENIWKAQSGLSRMTATNQNGNWLDVTVGADMLLNQNIAAYAALSQAENTTNNSDYLYTMGVSARF

Specific function: Unknown

COG id: COG5571

COG function: function code N; Autotransporter protein or domain, integral membrane beta-barrel involved in protein secretion

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 autotransporter (TC 1.B.12) domain [H]

Homologues:

Organism=Escherichia coli, GI87082287, Length=232, Percent_Identity=98.2758620689655, Blast_Score=469, Evalue=1e-134,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005546
- InterPro:   IPR016955 [H]

Pfam domain/function: PF03797 Autotransporter [H]

EC number: NA

Molecular weight: Translated: 25988; Mature: 25988

Theoretical pI: Translated: 4.41; Mature: 4.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIKKSGGRWQLSLLVSVVISAFFLNTAYAWQQEYIVDTQPGHSTERYTWDSDHQPDYND
CEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCCCEECCCCCCCCHHH
ILSQRIQSSQRALGLEVNLAEETPVDVTSSMSMGWNFPLYQQVTTGPVAALHYDGTTTSM
HHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHCCCCEEEEEECCCCHHH
YNEFGDSTTTLTDPLWHASVSTLGWRVDSRLGDLRPWAQISYNQQFGENIWKAQSGLSRM
HHHHCCCCCEECCCHHHHHHHHHHEEHHHHHCCCCCHHHCCCCHHHHHHHHHHHHHHHHH
TATNQNGNWLDVTVGADMLLNQNIAAYAALSQAENTTNNSDYLYTMGVSARF
EECCCCCCEEEEEECCHHHHCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCC
>Mature Secondary Structure
MIIKKSGGRWQLSLLVSVVISAFFLNTAYAWQQEYIVDTQPGHSTERYTWDSDHQPDYND
CEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCCCEECCCCCCCCHHH
ILSQRIQSSQRALGLEVNLAEETPVDVTSSMSMGWNFPLYQQVTTGPVAALHYDGTTTSM
HHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHCCCCEEEEEECCCCHHH
YNEFGDSTTTLTDPLWHASVSTLGWRVDSRLGDLRPWAQISYNQQFGENIWKAQSGLSRM
HHHHCCCCCEECCCHHHHHHHHHHEEHHHHHCCCCCHHHCCCCHHHHHHHHHHHHHHHHH
TATNQNGNWLDVTVGADMLLNQNIAAYAALSQAENTTNNSDYLYTMGVSARF
EECCCCCCEEEEEECCHHHHCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]