| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is folD [H]
Identifier: 170077511
GI number: 170077511
Start: 919947
End: 920813
Strand: Reverse
Name: folD [H]
Synonym: SYNPCC7002_A0889
Alternate gene names: 170077511
Gene position: 920813-919947 (Counterclockwise)
Preceding gene: 170077512
Following gene: 170077510
Centisome position: 30.61
GC content: 54.9
Gene sequence:
>867_bases ATGGCACAAATCCTTGACGGCAAAAGCTTTGCCCAAAAAATCCAAGCAAACCTCAAAACCCAAATCGCGGCCCTCACCCC AAAAATGGGTCGTCCCCCCGGTCTCGCCGTGCTGATGGTTGGGGATAATCCTGCTAGCGCTGCCTATGTCCGTAACAAAG AACGCGCCTGCGAACGGATTGGCATGGCCTCCTTTGGTAAGCATTTTCCCGCCGATACCACCCAAAGCGAACTTGAAGCT GTGATCCAAGACCTGAATCAAGATGAGCGAGTTGACGGGATTTTGGTGCAATTGCCGTTACCGCCCCACCTAGATGCCGT GGGTTTGCTGTTAACCATTGCCCCGGAAAAGGATGCCGATGGGCTGCACCCCTTAAACCTAGGCCATCTTGTACGCTCCG AACCGGGCCTGCGCAGTTGTACCCCCTACGGCGTAATGGAACTGCTCAAGGAATATCACATCCCCCTCGAAGGGAAAAAA GCCGTGGTGGTGGGCCGGAGTATTTTGGTAGGGAAACCCATTGCCTTGATGCTTTTAGAAGCAAATGCCACAGTGGCGAT CGCCCATTCTCGCACCCAAGACCTCGCTGCGGTGACCAGGGAAGCAGATATTCTCGTAGCCGCCATTGGCAGACCAGAAT TTATTACCGCTGACATGATCAAGCCCGGTGCTGTGGTGATCGATGTGGGCATCAATCGCATCGTCGATACGGCAACGGGT AAATCGCGCCTGGTGGGAGATGTCGCCTACACAGAGGCCGCCCAAGTCGCCGCCCAGATTACGCCCGTCCCCGGTGGCAT CGGCCCCATGACCGTAGCAATGCTCCTACAAAATACCTTCAACAGTTACCAAGCTAAGGCGAAGTAA
Upstream 100 bases:
>100_bases TGCTCCCACGACCCCTTAAATTTGCACCGCTTAGATCCTATCCTCAGCATCAGATCTAAGATAAACTTGGCAACCGAAAT GCTCAGCATCCCCGACATCC
Downstream 100 bases:
>100_bases GCATTTATTTTTAGGTACAGATTTGTATGAAATTTTCTCTCCTCCCGGGGGGAGTTTTTTATGGTCTTTAGCGAGGGAAA TTGCCCAGAGAAATTGACCT
Product: 5,10-methylenetetrahydrofolate dehydrogenase; methenyl tetrahydrofolate cyclohydrolase
Products: NA
Alternate protein names: Methylenetetrahydrofolate dehydrogenase; Methenyltetrahydrofolate cyclohydrolase [H]
Number of amino acids: Translated: 288; Mature: 287
Protein sequence:
>288_residues MAQILDGKSFAQKIQANLKTQIAALTPKMGRPPGLAVLMVGDNPASAAYVRNKERACERIGMASFGKHFPADTTQSELEA VIQDLNQDERVDGILVQLPLPPHLDAVGLLLTIAPEKDADGLHPLNLGHLVRSEPGLRSCTPYGVMELLKEYHIPLEGKK AVVVGRSILVGKPIALMLLEANATVAIAHSRTQDLAAVTREADILVAAIGRPEFITADMIKPGAVVIDVGINRIVDTATG KSRLVGDVAYTEAAQVAAQITPVPGGIGPMTVAMLLQNTFNSYQAKAK
Sequences:
>Translated_288_residues MAQILDGKSFAQKIQANLKTQIAALTPKMGRPPGLAVLMVGDNPASAAYVRNKERACERIGMASFGKHFPADTTQSELEA VIQDLNQDERVDGILVQLPLPPHLDAVGLLLTIAPEKDADGLHPLNLGHLVRSEPGLRSCTPYGVMELLKEYHIPLEGKK AVVVGRSILVGKPIALMLLEANATVAIAHSRTQDLAAVTREADILVAAIGRPEFITADMIKPGAVVIDVGINRIVDTATG KSRLVGDVAYTEAAQVAAQITPVPGGIGPMTVAMLLQNTFNSYQAKAK >Mature_287_residues AQILDGKSFAQKIQANLKTQIAALTPKMGRPPGLAVLMVGDNPASAAYVRNKERACERIGMASFGKHFPADTTQSELEAV IQDLNQDERVDGILVQLPLPPHLDAVGLLLTIAPEKDADGLHPLNLGHLVRSEPGLRSCTPYGVMELLKEYHIPLEGKKA VVVGRSILVGKPIALMLLEANATVAIAHSRTQDLAAVTREADILVAAIGRPEFITADMIKPGAVVIDVGINRIVDTATGK SRLVGDVAYTEAAQVAAQITPVPGGIGPMTVAMLLQNTFNSYQAKAK
Specific function: Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate [H]
COG id: COG0190
COG function: function code H; 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tetrahydrofolate dehydrogenase/cyclohydrolase family [H]
Homologues:
Organism=Homo sapiens, GI222136639, Length=287, Percent_Identity=46.3414634146341, Blast_Score=233, Evalue=2e-61, Organism=Homo sapiens, GI222418558, Length=289, Percent_Identity=46.7128027681661, Blast_Score=233, Evalue=2e-61, Organism=Homo sapiens, GI94721354, Length=289, Percent_Identity=44.636678200692, Blast_Score=229, Evalue=2e-60, Organism=Homo sapiens, GI36796743, Length=199, Percent_Identity=29.1457286432161, Blast_Score=77, Evalue=1e-14, Organism=Escherichia coli, GI1786741, Length=281, Percent_Identity=46.6192170818505, Blast_Score=261, Evalue=2e-71, Organism=Caenorhabditis elegans, GI17568735, Length=296, Percent_Identity=39.527027027027, Blast_Score=188, Evalue=3e-48, Organism=Saccharomyces cerevisiae, GI6319558, Length=284, Percent_Identity=44.3661971830986, Blast_Score=239, Evalue=5e-64, Organism=Saccharomyces cerevisiae, GI6321643, Length=291, Percent_Identity=42.6116838487972, Blast_Score=237, Evalue=2e-63, Organism=Saccharomyces cerevisiae, GI6322933, Length=293, Percent_Identity=26.2798634812287, Blast_Score=72, Evalue=1e-13, Organism=Drosophila melanogaster, GI17136816, Length=292, Percent_Identity=46.2328767123288, Blast_Score=247, Evalue=8e-66, Organism=Drosophila melanogaster, GI17136818, Length=292, Percent_Identity=46.2328767123288, Blast_Score=246, Evalue=9e-66, Organism=Drosophila melanogaster, GI62472483, Length=286, Percent_Identity=44.7552447552448, Blast_Score=233, Evalue=1e-61, Organism=Drosophila melanogaster, GI45551871, Length=286, Percent_Identity=44.7552447552448, Blast_Score=233, Evalue=1e-61, Organism=Drosophila melanogaster, GI24645718, Length=286, Percent_Identity=44.7552447552448, Blast_Score=233, Evalue=1e-61, Organism=Drosophila melanogaster, GI17137370, Length=286, Percent_Identity=44.7552447552448, Blast_Score=233, Evalue=1e-61,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016040 - InterPro: IPR000672 - InterPro: IPR020630 - InterPro: IPR020867 - InterPro: IPR020631 [H]
Pfam domain/function: PF00763 THF_DHG_CYH; PF02882 THF_DHG_CYH_C [H]
EC number: =1.5.1.5; =3.5.4.9 [H]
Molecular weight: Translated: 30556; Mature: 30425
Theoretical pI: Translated: 7.15; Mature: 7.15
Prosite motif: PS00767 THF_DHG_CYH_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQILDGKSFAQKIQANLKTQIAALTPKMGRPPGLAVLMVGDNPASAAYVRNKERACERI CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHCHHHHHHHH GMASFGKHFPADTTQSELEAVIQDLNQDERVDGILVQLPLPPHLDAVGLLLTIAPEKDAD CHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCEEEEEEECCCCCCC GLHPLNLGHLVRSEPGLRSCTPYGVMELLKEYHIPLEGKKAVVVGRSILVGKPIALMLLE CCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECEEEECCCEEEEEEE ANATVAIAHSRTQDLAAVTREADILVAAIGRPEFITADMIKPGAVVIDVGINRIVDTATG CCCEEEEEECCCHHHHHHHHCCCEEEEECCCCCEEECCCCCCCEEEEECCCHHHHCCCCC KSRLVGDVAYTEAAQVAAQITPVPGGIGPMTVAMLLQNTFNSYQAKAK CHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure AQILDGKSFAQKIQANLKTQIAALTPKMGRPPGLAVLMVGDNPASAAYVRNKERACERI CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHCHHHHHHHH GMASFGKHFPADTTQSELEAVIQDLNQDERVDGILVQLPLPPHLDAVGLLLTIAPEKDAD CHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCEEEEEEECCCCCCC GLHPLNLGHLVRSEPGLRSCTPYGVMELLKEYHIPLEGKKAVVVGRSILVGKPIALMLLE CCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECEEEECCCEEEEEEE ANATVAIAHSRTQDLAAVTREADILVAAIGRPEFITADMIKPGAVVIDVGINRIVDTATG CCCEEEEEECCCHHHHHHHHCCCEEEEECCCCCEEECCCCCCCEEEEECCCHHHHCCCCC KSRLVGDVAYTEAAQVAAQITPVPGGIGPMTVAMLLQNTFNSYQAKAK CHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA