| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
Click here to switch to the map view.
The map label for this gene is spsA [H]
Identifier: 170077510
GI number: 170077510
Start: 917516
End: 919675
Strand: Reverse
Name: spsA [H]
Synonym: SYNPCC7002_A0888
Alternate gene names: 170077510
Gene position: 919675-917516 (Counterclockwise)
Preceding gene: 170077511
Following gene: 170077509
Centisome position: 30.57
GC content: 47.73
Gene sequence:
>2160_bases ATGATGCGTCCCCAATCCCCTCGATACATCGTTTTAATCAGTATTCACGGTCTTATCCGCAGTCAAAATTTAGAATTGGG TCGTGATGCTGATACGGGTGGTCAGACGAAATATGTGGTCGAACTTGCGGCTGCCCTGGCCCAGCACCCAGACATTGAAC AGGTCGATTTGATTACCAAGCAGATCATTGACCCAAAAGTGAGTGCCGATTACGGTCAGTCTTGCGAACCCATTAGCGAA AAAGCCAATATTATTCGCATCTCAGCCGGGATCGATGACTATATTCCCAAAGAAGAACTGTGGGATTACCTCGATAATTT CGCAGACAACACTTTAACCTATCTCAACCATCAACCCAGGCTCCCGGATCTGATCCACAGTCATTATGCCGATGCCGGTT ATGTGGGCATCCGTCTAGCGAATCATCTAGGGATTCCTTTATTTCACACAGGCCATTCCCTCGGTCGCAGCAAACGTAAG CGCTTGCTTGCTAGTGGTGTGAAAGGGGAACTGATCGAGAGTCGTTACCGTTTGACCCGGCGAATTAATGCGGAGGAAGA AACCCTTGCCTCGGCGACCAGGGTGATTACCAGTACCCAACAGGAAATCCAGGGTCAGTATGCCCAGTACGATTTTTACC ATCCGGAAAATATGCGGGTGATTCCACCGGGGACGGATCTGCAATGTTTTTATCCCCCCACGGGTGATGAATGGCAAGGT TCAGTTTGGCAGAAATTGGCGGTGTTTTTGCAGGAACCCCGTAAGCCGATGATTTTAGCCTTGTCCCGTTTGGATCAGCG CAAAAATATTCTGGGCCTAATCCGAGCTTTTGGGACATCACCATCGTTGCAACAGCAGGCTAATTTGGTGGTTTTTTCGG GTACGCGGGATGATCCACGGGATTTAAGTAGCAATGCCCAGGCGATCTTTACGGAATTGTTATGGGCGATTGATCGTTAC AACCTGTATGGCAAAGTGGCCTACCCTAAATTTTTGTCTGCCCAAGAAATTGGGGAACTGTATCGGCTGGCTAGTCTTTC CCAAGGGGTATTTGTGAATCCAGCGTTAACGGAGCCCTTTGGTTTGACGTTGATCGAGGCGGCAGCCAGCGGTTTACCCA TTGTGGCCACTGAGGATGGGGGGCCAGTGGATATTTTGAAAAATTGTCAAAATGGCTATTTGGTCAATCCCCTTGAACCC CAGAATATTGCGGCGAAGATTAGCAAAATTTTAGGGGACGCCCAACGGTGGCAAACGTTTTCGCAACAGGGGATTCGCAA TGTGCGCCGGGTATATACTTGGCAGTCCCATGTGGAGCGGTATATGGAAGTGGTGCAGTCGATTTTGAACCGCACGGAGT CCCGACAGGAATTGGCGATCGCCCGTCGCCCGGCCCTATATCACCAGGGAGCGATTGTTTCGACCATCGATCAGAATTTG GTGGGGGATCCGCTTGCCCTGCAAGCATTGGTGGATTTGCTCAATCAGCACCGTAAGGAAATTGCCTTTTGTATTGCGAC TGGAAGGCGTTTGGATGCGGCCCTCAAGGTTTTGCGGGAACACAATATCCCCCAACCGGATGTGTTGATGACGAGCCTCG GCACAGAAATTTACTATGCACCCCAATTGACACCAGATTGGGCTTGGTCGAATCACATTAATTATCTTTGGAATCGTCAA CGGGTGGTGGATCTGTTAGGGGATTTACCTGGGTTAGAGCTTCAACCCAAATTATTCCAAAGCACCTTTAAGATTAGCTA TTTTTACGATCCGGCGATCGCCCCTAGTGTTGAGGAATTAAAACGCATTTTATTTAAAAATGATCAGACTGTAAATGTTA TGTTTTCCTTTGGTCAATATCTTGATGTTGTACCAATTCGCGCCTCAAAAGGTTACGGGTTACGCTGGTTTGCAGAACAG TGGGAAATTCCCCTCAACCGCATTCTAACGGTGGGTGGTTCTGGGGCCGATGAAGACATGATGTTAGGCAATAGTTTGTC TGTGGTGGTTAAAAATCGCCACCGGGAAGAGCTTTCGGATTTAAATAATATTCAACCAATTTATTTTTCTGAAAAAGAAT TTGCGGCTGGCATTTTAGATGGTTTAGCCCACTATAATTTCTTAGAATTATGTCGTGCGACGGGACAAAATCATGACTGA
Upstream 100 bases:
>100_bases CACAACAGCAGTTACCTTTTGGTTGCGTTTTGCGATTCATTTTTCAACGAGAACCAAACCCCTTGCGACGGTTGATATTG GGTATGCCCCCAGAGCAACG
Downstream 100 bases:
>100_bases TCGCTTGCTGTTATGTACTGATCTAGATCGCACTTTGATTCCCAATGGTGCCGCCCCAGAATCTCCCCAGGCAAGGGCTT ATTTCCGTCAATTTGTTGCC
Product: sucrose-phosphate synthase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 719; Mature: 719
Protein sequence:
>719_residues MMRPQSPRYIVLISIHGLIRSQNLELGRDADTGGQTKYVVELAAALAQHPDIEQVDLITKQIIDPKVSADYGQSCEPISE KANIIRISAGIDDYIPKEELWDYLDNFADNTLTYLNHQPRLPDLIHSHYADAGYVGIRLANHLGIPLFHTGHSLGRSKRK RLLASGVKGELIESRYRLTRRINAEEETLASATRVITSTQQEIQGQYAQYDFYHPENMRVIPPGTDLQCFYPPTGDEWQG SVWQKLAVFLQEPRKPMILALSRLDQRKNILGLIRAFGTSPSLQQQANLVVFSGTRDDPRDLSSNAQAIFTELLWAIDRY NLYGKVAYPKFLSAQEIGELYRLASLSQGVFVNPALTEPFGLTLIEAAASGLPIVATEDGGPVDILKNCQNGYLVNPLEP QNIAAKISKILGDAQRWQTFSQQGIRNVRRVYTWQSHVERYMEVVQSILNRTESRQELAIARRPALYHQGAIVSTIDQNL VGDPLALQALVDLLNQHRKEIAFCIATGRRLDAALKVLREHNIPQPDVLMTSLGTEIYYAPQLTPDWAWSNHINYLWNRQ RVVDLLGDLPGLELQPKLFQSTFKISYFYDPAIAPSVEELKRILFKNDQTVNVMFSFGQYLDVVPIRASKGYGLRWFAEQ WEIPLNRILTVGGSGADEDMMLGNSLSVVVKNRHREELSDLNNIQPIYFSEKEFAAGILDGLAHYNFLELCRATGQNHD
Sequences:
>Translated_719_residues MMRPQSPRYIVLISIHGLIRSQNLELGRDADTGGQTKYVVELAAALAQHPDIEQVDLITKQIIDPKVSADYGQSCEPISE KANIIRISAGIDDYIPKEELWDYLDNFADNTLTYLNHQPRLPDLIHSHYADAGYVGIRLANHLGIPLFHTGHSLGRSKRK RLLASGVKGELIESRYRLTRRINAEEETLASATRVITSTQQEIQGQYAQYDFYHPENMRVIPPGTDLQCFYPPTGDEWQG SVWQKLAVFLQEPRKPMILALSRLDQRKNILGLIRAFGTSPSLQQQANLVVFSGTRDDPRDLSSNAQAIFTELLWAIDRY NLYGKVAYPKFLSAQEIGELYRLASLSQGVFVNPALTEPFGLTLIEAAASGLPIVATEDGGPVDILKNCQNGYLVNPLEP QNIAAKISKILGDAQRWQTFSQQGIRNVRRVYTWQSHVERYMEVVQSILNRTESRQELAIARRPALYHQGAIVSTIDQNL VGDPLALQALVDLLNQHRKEIAFCIATGRRLDAALKVLREHNIPQPDVLMTSLGTEIYYAPQLTPDWAWSNHINYLWNRQ RVVDLLGDLPGLELQPKLFQSTFKISYFYDPAIAPSVEELKRILFKNDQTVNVMFSFGQYLDVVPIRASKGYGLRWFAEQ WEIPLNRILTVGGSGADEDMMLGNSLSVVVKNRHREELSDLNNIQPIYFSEKEFAAGILDGLAHYNFLELCRATGQNHD >Mature_719_residues MMRPQSPRYIVLISIHGLIRSQNLELGRDADTGGQTKYVVELAAALAQHPDIEQVDLITKQIIDPKVSADYGQSCEPISE KANIIRISAGIDDYIPKEELWDYLDNFADNTLTYLNHQPRLPDLIHSHYADAGYVGIRLANHLGIPLFHTGHSLGRSKRK RLLASGVKGELIESRYRLTRRINAEEETLASATRVITSTQQEIQGQYAQYDFYHPENMRVIPPGTDLQCFYPPTGDEWQG SVWQKLAVFLQEPRKPMILALSRLDQRKNILGLIRAFGTSPSLQQQANLVVFSGTRDDPRDLSSNAQAIFTELLWAIDRY NLYGKVAYPKFLSAQEIGELYRLASLSQGVFVNPALTEPFGLTLIEAAASGLPIVATEDGGPVDILKNCQNGYLVNPLEP QNIAAKISKILGDAQRWQTFSQQGIRNVRRVYTWQSHVERYMEVVQSILNRTESRQELAIARRPALYHQGAIVSTIDQNL VGDPLALQALVDLLNQHRKEIAFCIATGRRLDAALKVLREHNIPQPDVLMTSLGTEIYYAPQLTPDWAWSNHINYLWNRQ RVVDLLGDLPGLELQPKLFQSTFKISYFYDPAIAPSVEELKRILFKNDQTVNVMFSFGQYLDVVPIRASKGYGLRWFAEQ WEIPLNRILTVGGSGADEDMMLGNSLSVVVKNRHREELSDLNNIQPIYFSEKEFAAGILDGLAHYNFLELCRATGQNHD
Specific function: Unknown
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 1 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001296 - InterPro: IPR000368 [H]
Pfam domain/function: PF00534 Glycos_transf_1; PF00862 Sucrose_synth [H]
EC number: =2.4.1.246 [H]
Molecular weight: Translated: 81205; Mature: 81205
Theoretical pI: Translated: 6.38; Mature: 6.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMRPQSPRYIVLISIHGLIRSQNLELGRDADTGGQTKYVVELAAALAQHPDIEQVDLITK CCCCCCCCEEEEEEEECHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHH QIIDPKVSADYGQSCEPISEKANIIRISAGIDDYIPKEELWDYLDNFADNTLTYLNHQPR HHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCC LPDLIHSHYADAGYVGIRLANHLGIPLFHTGHSLGRSKRKRLLASGVKGELIESRYRLTR CHHHHHHHCCCCCCHHEEEHHHCCCCEEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHHH RINAEEETLASATRVITSTQQEIQGQYAQYDFYHPENMRVIPPGTDLQCFYPPTGDEWQG HCCCHHHHHHHHHHHHHHHHHHHCCCHHEEEEECCCCCEEECCCCCCEEEECCCCCCCCH SVWQKLAVFLQEPRKPMILALSRLDQRKNILGLIRAFGTSPSLQQQANLVVFSGTRDDPR HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCEEEEECCCCCHH DLSSNAQAIFTELLWAIDRYNLYGKVAYPKFLSAQEIGELYRLASLSQGVFVNPALTEPF HHHCCHHHHHHHHHHHHHHHCCEEEECCCHHCCHHHHHHHHHHHHCCCCEEECCCCCCCC GLTLIEAAASGLPIVATEDGGPVDILKNCQNGYLVNPLEPQNIAAKISKILGDAQRWQTF CHHHHHHHHCCCCEEEECCCCCHHHHHCCCCCEEECCCCCHHHHHHHHHHHCCHHHHHHH SQQGIRNVRRVYTWQSHVERYMEVVQSILNRTESRQELAIARRPALYHQGAIVSTIDQNL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHCCCHHHHHHHHH VGDPLALQALVDLLNQHRKEIAFCIATGRRLDAALKVLREHNIPQPDVLMTSLGTEIYYA CCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHCCCEEEEC PQLTPDWAWSNHINYLWNRQRVVDLLGDLPGLELQPKLFQSTFKISYFYDPAIAPSVEEL CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHEEEEEEECCCCCCCHHHH KRILFKNDQTVNVMFSFGQYLDVVPIRASKGYGLRWFAEQWEIPLNRILTVGGSGADEDM HHHHHCCCCEEEEEEECCCHHEEEEEECCCCCCEEEEHHHCCCCHHHEEEECCCCCCCCE MLGNSLSVVVKNRHREELSDLNNIQPIYFSEKEFAAGILDGLAHYNFLELCRATGQNHD ECCCCCEEEEHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MMRPQSPRYIVLISIHGLIRSQNLELGRDADTGGQTKYVVELAAALAQHPDIEQVDLITK CCCCCCCCEEEEEEEECHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHH QIIDPKVSADYGQSCEPISEKANIIRISAGIDDYIPKEELWDYLDNFADNTLTYLNHQPR HHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCC LPDLIHSHYADAGYVGIRLANHLGIPLFHTGHSLGRSKRKRLLASGVKGELIESRYRLTR CHHHHHHHCCCCCCHHEEEHHHCCCCEEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHHH RINAEEETLASATRVITSTQQEIQGQYAQYDFYHPENMRVIPPGTDLQCFYPPTGDEWQG HCCCHHHHHHHHHHHHHHHHHHHCCCHHEEEEECCCCCEEECCCCCCEEEECCCCCCCCH SVWQKLAVFLQEPRKPMILALSRLDQRKNILGLIRAFGTSPSLQQQANLVVFSGTRDDPR HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCEEEEECCCCCHH DLSSNAQAIFTELLWAIDRYNLYGKVAYPKFLSAQEIGELYRLASLSQGVFVNPALTEPF HHHCCHHHHHHHHHHHHHHHCCEEEECCCHHCCHHHHHHHHHHHHCCCCEEECCCCCCCC GLTLIEAAASGLPIVATEDGGPVDILKNCQNGYLVNPLEPQNIAAKISKILGDAQRWQTF CHHHHHHHHCCCCEEEECCCCCHHHHHCCCCCEEECCCCCHHHHHHHHHHHCCHHHHHHH SQQGIRNVRRVYTWQSHVERYMEVVQSILNRTESRQELAIARRPALYHQGAIVSTIDQNL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHCCCHHHHHHHHH VGDPLALQALVDLLNQHRKEIAFCIATGRRLDAALKVLREHNIPQPDVLMTSLGTEIYYA CCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHCCCEEEEC PQLTPDWAWSNHINYLWNRQRVVDLLGDLPGLELQPKLFQSTFKISYFYDPAIAPSVEEL CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHEEEEEEECCCCCCCHHHH KRILFKNDQTVNVMFSFGQYLDVVPIRASKGYGLRWFAEQWEIPLNRILTVGGSGADEDM HHHHHCCCCEEEEEEECCCHHEEEEEECCCCCCEEEEHHHCCCCHHHEEEECCCCCCCCE MLGNSLSVVVKNRHREELSDLNNIQPIYFSEKEFAAGILDGLAHYNFLELCRATGQNHD ECCCCCEEEEHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11743193; 11743194 [H]