| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is hliA
Identifier: 170077480
GI number: 170077480
Start: 886182
End: 886352
Strand: Reverse
Name: hliA
Synonym: SYNPCC7002_A0858
Alternate gene names: NA
Gene position: 886352-886182 (Counterclockwise)
Preceding gene: 170077488
Following gene: 170077479
Centisome position: 29.47
GC content: 50.88
Gene sequence:
>171_bases ATGGCAGCTCCAGAACCCACCGTTAAGCCCAATCTTGAAGATCCGAAGTTTGGCTTCAATCTCTATTCCGAGAAGCTCAA TGGCCGGGCGGCGATGATCGGGATCATCATTGCGATCGCCATCGAATTATTCACCAAAGAAGGCGTCCTGAGCTGGTTGG GGTTGATCTAA
Upstream 100 bases:
>100_bases ATTGAGCCATGAAATAGCGAAATGTACGACCGTGGCTTTTGTGCGCTACACTACATATTAAGAATTATTACATTAATTTC GATAAGACGAGGTTTTTACC
Downstream 100 bases:
>100_bases GGCCGCTGACTAAATCTTCTGTTTATTAAGTCTGGGTCTTCCTCGCCATTGTGGGGAAGATTTTTTTCGTTTTTAATAAG AATCCCCGGCCCCAGGGATC
Product: high light inducible protein hli5
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 56; Mature: 55
Protein sequence:
>56_residues MAAPEPTVKPNLEDPKFGFNLYSEKLNGRAAMIGIIIAIAIELFTKEGVLSWLGLI
Sequences:
>Translated_56_residues MAAPEPTVKPNLEDPKFGFNLYSEKLNGRAAMIGIIIAIAIELFTKEGVLSWLGLI >Mature_55_residues AAPEPTVKPNLEDPKFGFNLYSEKLNGRAAMIGIIIAIAIELFTKEGVLSWLGLI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6102; Mature: 5971
Theoretical pI: Translated: 4.80; Mature: 4.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAPEPTVKPNLEDPKFGFNLYSEKLNGRAAMIGIIIAIAIELFTKEGVLSWLGLI CCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AAPEPTVKPNLEDPKFGFNLYSEKLNGRAAMIGIIIAIAIELFTKEGVLSWLGLI CCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA