| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170077479
Identifier: 170077479
GI number: 170077479
Start: 884446
End: 886068
Strand: Reverse
Name: 170077479
Synonym: SYNPCC7002_A0857
Alternate gene names: NA
Gene position: 886068-884446 (Counterclockwise)
Preceding gene: 170077480
Following gene: 170077478
Centisome position: 29.46
GC content: 52.43
Gene sequence:
>1623_bases TTGTCAGTAACTGCCATGCTTCGTCTTACGGAAATCAAACTGCCCCTCGACCACAGCCCAGAGGCGATCGCCCAGGCCAT TTGCCAGAAGTTAAAAATTCAGCCGGATGACTTGCTGGAATATCAGATTTTTAAACGCAGCTACGATGCCCGTAAAAAGA GCAATATTTACCTCGTCTACATCTTTGATGTGCACACCACGAAGGATCAAGCTTTGCTAAAACGCTTCAAAAAAGATCCC CATGTGCTCCCCACTCCAGACATGAGTTACAAAATGGTGGCCCAAGCACCGGCAGATTGTGCGACGCGGCCCATCGTCAT CGGCATGGGGCCTTGTGGGATGTTTGCGGGATTAATGCTAGCCAAAATGGGCTTTCGGCCGATTGTGTTAGAACGGGGAA AAACCGTCAATGAGCGCACCAAAGACACCTTTAATTTCTGGAAAAAGAAGGGAGAATTTAACCCCGAATCTAATGCTCAA TTTGGAGAAGGAGGCGCAGGGACATTCTCCGATGGGAAGCTCTACAGCCAGGTGCGCGATCGCCACCATTACAAACGCAA AGTCCTCGAAGAATTCGTCGCCGCCGGGGCCAATCCCGAAATCCTCTACATCGCCAAGCCCCACATCGGCACCTTTAAAC TCGTGGGCATCGTCCAAAGCATTCGCAAAACCATCGAATCCCTCGGCGGCGAAATTCGTTTCCAAAGCAAGGTCAAAACC CTCGAACTAGAAAACCATCAGGTCAAAGGCGTCACCCTCGAAAATGGCGAATTTATTCCCAGTTCCCACGTGGTGCTGGC CATGGGCCACAGTGCGCGGGATACCTTCCAAATGCTCCATGACCAGGGCGTTTACATCGAACCCAAGCCCTTTTCCATTG GCTTTCGCATTGAACATCCCCAACCCCTGATCGATGAATGTCGCTACGGGGAATTTGCTGGCAATAAGATTCTCGGTGCC GCCGATTACAAGCTCGTCCACCACTGTCAAAATGGGCGCTCGGTCTATAGCTTTTGTATGTGTCCGGGGGGATTGGTGAT TGGGGCCACCTCCGAGGCAGGCAAAGTCGTCACCAACGGCATGAGCCAATATTCCCGCAACGAACGTAACGCCAATGCGG GGATCGTTGTCGGCATTACCCCAGAAGAGGATTTTCCAGGTCATCCCCTCGCAGGCATTGATCTCCAACGAAAATTAGAA GCCAGGGCCTTTGAACTGGGTGGTGGTGATTACAGCGCGCCGGGTCAACTGGTGGGGGACTTCCTCGCGGGTTGTTCTTC TGAGTCGTTGGGCAAAGTAAAACCTTCCTATGCCCCGGGAGTTAAGCTAACGGATCTCAGCACCGCGCTCCCGGACTACG CCATCGAAGCGATTCGGGAAGCTCTACCCGCTTTTGACAAACAAATTAAGGGGTTTGCCATGGCTGAGGCGATGTTAACG GGGGTGGAAACGCGCACCTCTTCGCCAATTCGCATTAAACGGGGCAAAGATTACCAAAGTATTAATACCCAGGGCCTCTA TCCTGCGGGGGAGGGAGCTGGTTATGCAGGGGGCATTCTCTCGGCAGCCATTGATGGGGTCAAAGTGGCGGAGGCGATCG CCTTAGATATTGTCAATGAGTAA
Upstream 100 bases:
>100_bases ATCTTCTGTTTATTAAGTCTGGGTCTTCCTCGCCATTGTGGGGAAGATTTTTTTCGTTTTTAATAAGAATCCCCGGCCCC AGGGATCATCACCGCTATTT
Downstream 100 bases:
>100_bases CAATTCAGCCAAATCGCGCTTTTTTTTCTAAAACATTTTCACTACACTGACACTACAACTTTTGATGTTTTGCCTCATTC CGAGGACAGATATTTAGTAA
Product: putative FAD-dependent dehydrogenase
Products: NA
Alternate protein names: ORF1 [H]
Number of amino acids: Translated: 540; Mature: 539
Protein sequence:
>540_residues MSVTAMLRLTEIKLPLDHSPEAIAQAICQKLKIQPDDLLEYQIFKRSYDARKKSNIYLVYIFDVHTTKDQALLKRFKKDP HVLPTPDMSYKMVAQAPADCATRPIVIGMGPCGMFAGLMLAKMGFRPIVLERGKTVNERTKDTFNFWKKKGEFNPESNAQ FGEGGAGTFSDGKLYSQVRDRHHYKRKVLEEFVAAGANPEILYIAKPHIGTFKLVGIVQSIRKTIESLGGEIRFQSKVKT LELENHQVKGVTLENGEFIPSSHVVLAMGHSARDTFQMLHDQGVYIEPKPFSIGFRIEHPQPLIDECRYGEFAGNKILGA ADYKLVHHCQNGRSVYSFCMCPGGLVIGATSEAGKVVTNGMSQYSRNERNANAGIVVGITPEEDFPGHPLAGIDLQRKLE ARAFELGGGDYSAPGQLVGDFLAGCSSESLGKVKPSYAPGVKLTDLSTALPDYAIEAIREALPAFDKQIKGFAMAEAMLT GVETRTSSPIRIKRGKDYQSINTQGLYPAGEGAGYAGGILSAAIDGVKVAEAIALDIVNE
Sequences:
>Translated_540_residues MSVTAMLRLTEIKLPLDHSPEAIAQAICQKLKIQPDDLLEYQIFKRSYDARKKSNIYLVYIFDVHTTKDQALLKRFKKDP HVLPTPDMSYKMVAQAPADCATRPIVIGMGPCGMFAGLMLAKMGFRPIVLERGKTVNERTKDTFNFWKKKGEFNPESNAQ FGEGGAGTFSDGKLYSQVRDRHHYKRKVLEEFVAAGANPEILYIAKPHIGTFKLVGIVQSIRKTIESLGGEIRFQSKVKT LELENHQVKGVTLENGEFIPSSHVVLAMGHSARDTFQMLHDQGVYIEPKPFSIGFRIEHPQPLIDECRYGEFAGNKILGA ADYKLVHHCQNGRSVYSFCMCPGGLVIGATSEAGKVVTNGMSQYSRNERNANAGIVVGITPEEDFPGHPLAGIDLQRKLE ARAFELGGGDYSAPGQLVGDFLAGCSSESLGKVKPSYAPGVKLTDLSTALPDYAIEAIREALPAFDKQIKGFAMAEAMLT GVETRTSSPIRIKRGKDYQSINTQGLYPAGEGAGYAGGILSAAIDGVKVAEAIALDIVNE >Mature_539_residues SVTAMLRLTEIKLPLDHSPEAIAQAICQKLKIQPDDLLEYQIFKRSYDARKKSNIYLVYIFDVHTTKDQALLKRFKKDPH VLPTPDMSYKMVAQAPADCATRPIVIGMGPCGMFAGLMLAKMGFRPIVLERGKTVNERTKDTFNFWKKKGEFNPESNAQF GEGGAGTFSDGKLYSQVRDRHHYKRKVLEEFVAAGANPEILYIAKPHIGTFKLVGIVQSIRKTIESLGGEIRFQSKVKTL ELENHQVKGVTLENGEFIPSSHVVLAMGHSARDTFQMLHDQGVYIEPKPFSIGFRIEHPQPLIDECRYGEFAGNKILGAA DYKLVHHCQNGRSVYSFCMCPGGLVIGATSEAGKVVTNGMSQYSRNERNANAGIVVGITPEEDFPGHPLAGIDLQRKLEA RAFELGGGDYSAPGQLVGDFLAGCSSESLGKVKPSYAPGVKLTDLSTALPDYAIEAIREALPAFDKQIKGFAMAEAMLTG VETRTSSPIRIKRGKDYQSINTQGLYPAGEGAGYAGGILSAAIDGVKVAEAIALDIVNE
Specific function: Unknown
COG id: COG2509
COG function: function code R; Uncharacterized FAD-dependent dehydrogenases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004792 [H]
Pfam domain/function: PF03486 HI0933_like [H]
EC number: NA
Molecular weight: Translated: 59037; Mature: 58905
Theoretical pI: Translated: 8.20; Mature: 8.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVTAMLRLTEIKLPLDHSPEAIAQAICQKLKIQPDDLLEYQIFKRSYDARKKSNIYLVY CCCEEEEEEEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCEEEEE IFDVHTTKDQALLKRFKKDPHVLPTPDMSYKMVAQAPADCATRPIVIGMGPCGMFAGLML EEEECCCHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCCCEEEECCHHHHHHHHHH AKMGFRPIVLERGKTVNERTKDTFNFWKKKGEFNPESNAQFGEGGAGTFSDGKLYSQVRD HHCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH RHHYKRKVLEEFVAAGANPEILYIAKPHIGTFKLVGIVQSIRKTIESLGGEIRFQSKVKT HHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCEEE LELENHQVKGVTLENGEFIPSSHVVLAMGHSARDTFQMLHDQGVYIEPKPFSIGFRIEHP EEECCCEEEEEEECCCCCCCCCCEEEEECCCHHHHHHHHHCCCCEECCCCCEEEEEECCC QPLIDECRYGEFAGNKILGAADYKLVHHCQNGRSVYSFCMCPGGLVIGATSEAGKVVTNG CCHHHHCCCCCCCCCEEECHHHHHHHHHHCCCCCEEHEEECCCCEEEECCCCCCHHHHHH MSQYSRNERNANAGIVVGITPEEDFPGHPLAGIDLQRKLEARAFELGGGDYSAPGQLVGD HHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHEEEECCCCCCCCHHHHHH FLAGCSSESLGKVKPSYAPGVKLTDLSTALPDYAIEAIREALPAFDKQIKGFAMAEAMLT HHHCCCCCCCCCCCCCCCCCEEEECHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GVETRTSSPIRIKRGKDYQSINTQGLYPAGEGAGYAGGILSAAIDGVKVAEAIALDIVNE HHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHCCCC >Mature Secondary Structure SVTAMLRLTEIKLPLDHSPEAIAQAICQKLKIQPDDLLEYQIFKRSYDARKKSNIYLVY CCEEEEEEEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCEEEEE IFDVHTTKDQALLKRFKKDPHVLPTPDMSYKMVAQAPADCATRPIVIGMGPCGMFAGLML EEEECCCHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCCCEEEECCHHHHHHHHHH AKMGFRPIVLERGKTVNERTKDTFNFWKKKGEFNPESNAQFGEGGAGTFSDGKLYSQVRD HHCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH RHHYKRKVLEEFVAAGANPEILYIAKPHIGTFKLVGIVQSIRKTIESLGGEIRFQSKVKT HHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCEEE LELENHQVKGVTLENGEFIPSSHVVLAMGHSARDTFQMLHDQGVYIEPKPFSIGFRIEHP EEECCCEEEEEEECCCCCCCCCCEEEEECCCHHHHHHHHHCCCCEECCCCCEEEEEECCC QPLIDECRYGEFAGNKILGAADYKLVHHCQNGRSVYSFCMCPGGLVIGATSEAGKVVTNG CCHHHHCCCCCCCCCEEECHHHHHHHHHHCCCCCEEHEEECCCCEEEECCCCCCHHHHHH MSQYSRNERNANAGIVVGITPEEDFPGHPLAGIDLQRKLEARAFELGGGDYSAPGQLVGD HHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHEEEECCCCCCCCHHHHHH FLAGCSSESLGKVKPSYAPGVKLTDLSTALPDYAIEAIREALPAFDKQIKGFAMAEAMLT HHHCCCCCCCCCCCCCCCCCEEEECHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GVETRTSSPIRIKRGKDYQSINTQGLYPAGEGAGYAGGILSAAIDGVKVAEAIALDIVNE HHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8396545 [H]