| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170077478
Identifier: 170077478
GI number: 170077478
Start: 883979
End: 884314
Strand: Reverse
Name: 170077478
Synonym: SYNPCC7002_A0856
Alternate gene names: NA
Gene position: 884314-883979 (Counterclockwise)
Preceding gene: 170077479
Following gene: 170077475
Centisome position: 29.4
GC content: 52.08
Gene sequence:
>336_bases ATGACTCGGGCAACTAGCACGACAGAAATGGAAGTCACCAGTATTCGCCTAGAGCGCAAACTGAAAGATAAACTCAAGGA ACTCGCTGGAAACCAGGGATACCAAGCTCTAATCCGCGATATTCTCTGGAACTACGTCAATCACAACTCAGGGGATTATC GCCCCCAGTTTAGCGAAGCAGATATTCGGGCGACCCTTGAGGCGATCGCCAAAAAGGATGAAACCTGCGCCCTTACGGGG AAACGCATCCAAACAGGCGAAACCATGTGCCTCGGCCTCACTATTCACGGCGATTTTGTCCCCCTGAGTCCGGCTGTCGA TCTGCCCAATTCCTAG
Upstream 100 bases:
>100_bases AACATTTTCACTACACTGACACTACAACTTTTGATGTTTTGCCTCATTCCGAGGACAGATATTTAGTAAAGTCTTAAATG TAAGGGGATCAGCGAAAATT
Downstream 100 bases:
>100_bases GTTTAGGCCGTCCCAGTGGCGACTGCTAGATAGGTTTCTTCAAGCAAAAAAGAGCCCCGCTCGAACTTAACCGCCCAATA ACCACCAGGGCGGCGATCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 111; Mature: 110
Protein sequence:
>111_residues MTRATSTTEMEVTSIRLERKLKDKLKELAGNQGYQALIRDILWNYVNHNSGDYRPQFSEADIRATLEAIAKKDETCALTG KRIQTGETMCLGLTIHGDFVPLSPAVDLPNS
Sequences:
>Translated_111_residues MTRATSTTEMEVTSIRLERKLKDKLKELAGNQGYQALIRDILWNYVNHNSGDYRPQFSEADIRATLEAIAKKDETCALTG KRIQTGETMCLGLTIHGDFVPLSPAVDLPNS >Mature_110_residues TRATSTTEMEVTSIRLERKLKDKLKELAGNQGYQALIRDILWNYVNHNSGDYRPQFSEADIRATLEAIAKKDETCALTGK RIQTGETMCLGLTIHGDFVPLSPAVDLPNS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12383; Mature: 12252
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRATSTTEMEVTSIRLERKLKDKLKELAGNQGYQALIRDILWNYVNHNSGDYRPQFSEA CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCH DIRATLEAIAKKDETCALTGKRIQTGETMCLGLTIHGDFVPLSPAVDLPNS HHHHHHHHHHCCCCEEEECCCEECCCCEEEEEEEECCCEEECCCCCCCCCC >Mature Secondary Structure TRATSTTEMEVTSIRLERKLKDKLKELAGNQGYQALIRDILWNYVNHNSGDYRPQFSEA CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCH DIRATLEAIAKKDETCALTGKRIQTGETMCLGLTIHGDFVPLSPAVDLPNS HHHHHHHHHHCCCCEEEECCCEECCCCEEEEEEEECCCEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA