| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170077450
Identifier: 170077450
GI number: 170077450
Start: 856276
End: 856737
Strand: Reverse
Name: 170077450
Synonym: SYNPCC7002_A0828
Alternate gene names: NA
Gene position: 856737-856276 (Counterclockwise)
Preceding gene: 170077451
Following gene: 170077449
Centisome position: 28.48
GC content: 48.27
Gene sequence:
>462_bases ATGTCAATGCGGATTTTTATGGTGCTCATTTGGGGATGGCTCGCGAAAATCGACGGTAATACAGAGGATGGCCCATTCTT GGTGCTCAACGGCATAGTCATTGATTCACACAAATTTTCTACTCTGAGTCCTTCTACCGTTTCCTCCCCAATTCCCATGG ATAAAGTCGAGCTAAGCTTGTGGGCAAGTTTTTGTACCTTTGCTTGCAGATTTGCTTTCTTTGCCTATGGTTTTTCAGCG TGGTATCGTCCTCTGTCTTGGATATCTCATTGGTCTTGGTTTAACGGGATTTTGGGGGCCACTGAACCCGCAACCTTCTT TGCTGCAGTGGGGGTTATTGGTTGGGGCGATCGCCTTGGGGACAATCCTCGCAACAATTTTTCTTCCCCGTTATCTCTGG CAAGTACCGCGCCACTTCTGGCCGATGCTGGGATTGGTGATGCTGCTGGCTGTAGTTTATAG
Upstream 100 bases:
>100_bases AGACGATCGCCTTTTTAGGGAGTCAACGAACAACCCTGGTCACGGGTGAGAGAAACAACACTATGACGCGCATAGGGTTC TGCCTTGGAGGTCTTTAGCA
Downstream 100 bases:
>100_bases TCAAGGGCGTCTACCCCGTCCGGCGACCAATGGTCTCTATAGCCTCACCCAAAGTCAGCCCAGTTTATTACAAAGTCCTG TAGAAATCCAAGGGCAAATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 153; Mature: 152
Protein sequence:
>153_residues MSMRIFMVLIWGWLAKIDGNTEDGPFLVLNGIVIDSHKFSTLSPSTVSSPIPMDKVELSLWASFCTFACRFAFFAYGFSA WYRPLSWISHWSWFNGILGATEPATFFAAVGVIGWGDRLGDNPRNNFSSPLSLASTAPLLADAGIGDAAGCSL
Sequences:
>Translated_153_residues MSMRIFMVLIWGWLAKIDGNTEDGPFLVLNGIVIDSHKFSTLSPSTVSSPIPMDKVELSLWASFCTFACRFAFFAYGFSA WYRPLSWISHWSWFNGILGATEPATFFAAVGVIGWGDRLGDNPRNNFSSPLSLASTAPLLADAGIGDAAGCSL >Mature_152_residues SMRIFMVLIWGWLAKIDGNTEDGPFLVLNGIVIDSHKFSTLSPSTVSSPIPMDKVELSLWASFCTFACRFAFFAYGFSAW YRPLSWISHWSWFNGILGATEPATFFAAVGVIGWGDRLGDNPRNNFSSPLSLASTAPLLADAGIGDAAGCSL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16622; Mature: 16491
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMRIFMVLIWGWLAKIDGNTEDGPFLVLNGIVIDSHKFSTLSPSTVSSPIPMDKVELSL CCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHH WASFCTFACRFAFFAYGFSAWYRPLSWISHWSWFNGILGATEPATFFAAVGVIGWGDRLG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHCC DNPRNNFSSPLSLASTAPLLADAGIGDAAGCSL CCCCCCCCCCHHHHHCCCHHHCCCCCCCCCCCC >Mature Secondary Structure SMRIFMVLIWGWLAKIDGNTEDGPFLVLNGIVIDSHKFSTLSPSTVSSPIPMDKVELSL CHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHH WASFCTFACRFAFFAYGFSAWYRPLSWISHWSWFNGILGATEPATFFAAVGVIGWGDRLG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHCC DNPRNNFSSPLSLASTAPLLADAGIGDAAGCSL CCCCCCCCCCHHHHHCCCHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA