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The map label for this gene is ctaCII [H]

Identifier: 170077350

GI number: 170077350

Start: 757817

End: 758710

Strand: Reverse

Name: ctaCII [H]

Synonym: SYNPCC7002_A0727

Alternate gene names: 170077350

Gene position: 758710-757817 (Counterclockwise)

Preceding gene: 170077351

Following gene: 170077349

Centisome position: 25.22

GC content: 52.24

Gene sequence:

>894_bases
ATGAAATTAAAAACAATTATTTCACTTTCGGCGATCGCCCTACTTTTGGGGGTATTTAGCTATTGGGTCGGGCAATGGTC
TTACAGTTGGTTGCCGCCCCAGGCTTCCGTGGAATCCCAACTGGTGGATCGGCTCTTTAGCACCCTGGTGGCGATCGGCA
CATTTATCCTGTTTGGCGTTGCCGGCACGATGACCTACTCGATCCTCTTCCACCGGGCAGGACGCTACGACACCAGCGAT
GGCCCCCCCATCGAAGGCAATGTCACCCTAGAAATCGTTTGGACAACAATCCCCTTCTTGATCGTCATTTATCTGGCCTA
TTTCAGCTATCAAACCTACCGCGAGATGAATATTCAAGCTCCGGGACATATGCACCAAGAGGCTTTAGTGACCAATGTTT
CTACAGGGAAAACCACCATGGCTATGCCCGTCACCAATGTGGAAGTCACTGCCAAGCAATGGGCCTGGATTTTCCATTAC
CCCGAAAAAAATGTCACCAGCACCGAACTCCATCTCCCGGTAAACCAACGCGCCCACTTCATTCTGCGATCGCCCGATGT
GATCCATGGCTTTTTTATCCCCGCCTTCCGGGTGAAGCAGGACGTGATCCCCTTTGAAGATACGGACTTTGAATTTACAC
CGATCAAAACAGGGAAATATCGGATTCGTGATTCCCAATTTAGCGGCACCTATTTCGCAGCGATGCAAGCCGATGTAGTG
GTGGAATCCCAGGAAGACTACCAAACCTGGTTAAACCAAGCAGCCCGCCAACCCCCCACTCCTGCCCCTAACCAAGCCGT
CAGTGAATACGCCCGCCGTCAGCAGAAAGAAGATCGTGCTGCCTGGAAAACCGTGCCCCCTGCGCCGCCACCCGTGGTGA
ATTATCATCCCTGA

Upstream 100 bases:

>100_bases
TTGGCAGCGGAATTTGGGGCGCACAATACGGCGGGTCATCTGCTCCGGCTCGGTGAAGATCCCAATGTGCTGTTGCGGTA
GGGGTGAGGAACATTAGGCT

Downstream 100 bases:

>100_bases
TTTTGTTTATTGACCTTTTTCCTCTGAATTTTTTTGTCAGTCTTCCATAAATTTTCTGTAATTCCGTAATCGCTCACAAA
CCATGACCCAAGCTCCCCCA

Product: cytochrome C oxidase subunit II

Products: NA

Alternate protein names: Cytochrome aa3 subunit 2; Cytochrome c oxidase polypeptide II; Oxidase aa(3) subunit 2 [H]

Number of amino acids: Translated: 297; Mature: 297

Protein sequence:

>297_residues
MKLKTIISLSAIALLLGVFSYWVGQWSYSWLPPQASVESQLVDRLFSTLVAIGTFILFGVAGTMTYSILFHRAGRYDTSD
GPPIEGNVTLEIVWTTIPFLIVIYLAYFSYQTYREMNIQAPGHMHQEALVTNVSTGKTTMAMPVTNVEVTAKQWAWIFHY
PEKNVTSTELHLPVNQRAHFILRSPDVIHGFFIPAFRVKQDVIPFEDTDFEFTPIKTGKYRIRDSQFSGTYFAAMQADVV
VESQEDYQTWLNQAARQPPTPAPNQAVSEYARRQQKEDRAAWKTVPPAPPPVVNYHP

Sequences:

>Translated_297_residues
MKLKTIISLSAIALLLGVFSYWVGQWSYSWLPPQASVESQLVDRLFSTLVAIGTFILFGVAGTMTYSILFHRAGRYDTSD
GPPIEGNVTLEIVWTTIPFLIVIYLAYFSYQTYREMNIQAPGHMHQEALVTNVSTGKTTMAMPVTNVEVTAKQWAWIFHY
PEKNVTSTELHLPVNQRAHFILRSPDVIHGFFIPAFRVKQDVIPFEDTDFEFTPIKTGKYRIRDSQFSGTYFAAMQADVV
VESQEDYQTWLNQAARQPPTPAPNQAVSEYARRQQKEDRAAWKTVPPAPPPVVNYHP
>Mature_297_residues
MKLKTIISLSAIALLLGVFSYWVGQWSYSWLPPQASVESQLVDRLFSTLVAIGTFILFGVAGTMTYSILFHRAGRYDTSD
GPPIEGNVTLEIVWTTIPFLIVIYLAYFSYQTYREMNIQAPGHMHQEALVTNVSTGKTTMAMPVTNVEVTAKQWAWIFHY
PEKNVTSTELHLPVNQRAHFILRSPDVIHGFFIPAFRVKQDVIPFEDTDFEFTPIKTGKYRIRDSQFSGTYFAAMQADVV
VESQEDYQTWLNQAARQPPTPAPNQAVSEYARRQQKEDRAAWKTVPPAPPPVVNYHP

Specific function: Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) [H]

COG id: COG1622

COG function: function code C; Heme/copper-type cytochrome/quinol oxidases, subunit 2

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c oxidase subunit 2 family [H]

Homologues:

Organism=Escherichia coli, GI1786635, Length=203, Percent_Identity=24.6305418719212, Blast_Score=65, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001505
- InterPro:   IPR008972
- InterPro:   IPR014222
- InterPro:   IPR015964
- InterPro:   IPR002429
- InterPro:   IPR011759 [H]

Pfam domain/function: PF00116 COX2; PF02790 COX2_TM [H]

EC number: =1.9.3.1 [H]

Molecular weight: Translated: 33754; Mature: 33754

Theoretical pI: Translated: 6.97; Mature: 6.97

Prosite motif: PS50999 COX2_TM ; PS50857 COX2_CUA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLKTIISLSAIALLLGVFSYWVGQWSYSWLPPQASVESQLVDRLFSTLVAIGTFILFGV
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
AGTMTYSILFHRAGRYDTSDGPPIEGNVTLEIVWTTIPFLIVIYLAYFSYQTYREMNIQA
HHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PGHMHQEALVTNVSTGKTTMAMPVTNVEVTAKQWAWIFHYPEKNVTSTELHLPVNQRAHF
CCCHHHHHHHEECCCCCEEEEEEECCEEEEHEEEEEEEECCCCCCCCEEEECCCCCCCEE
ILRSPDVIHGFFIPAFRVKQDVIPFEDTDFEFTPIKTGKYRIRDSQFSGTYFAAMQADVV
EECCCCEEEHHHCCHHHHHHCCCCCCCCCCEEEECCCCCEEEECCCCCCEEEEEEEEEEE
VESQEDYQTWLNQAARQPPTPAPNQAVSEYARRQQKEDRAAWKTVPPAPPPVVNYHP
EECHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKLKTIISLSAIALLLGVFSYWVGQWSYSWLPPQASVESQLVDRLFSTLVAIGTFILFGV
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
AGTMTYSILFHRAGRYDTSDGPPIEGNVTLEIVWTTIPFLIVIYLAYFSYQTYREMNIQA
HHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PGHMHQEALVTNVSTGKTTMAMPVTNVEVTAKQWAWIFHYPEKNVTSTELHLPVNQRAHF
CCCHHHHHHHEECCCCCEEEEEEECCEEEEHEEEEEEEECCCCCCCCEEEECCCCCCCEE
ILRSPDVIHGFFIPAFRVKQDVIPFEDTDFEFTPIKTGKYRIRDSQFSGTYFAAMQADVV
EECCCCEEEHHHCCHHHHHHCCCCCCCCCCEEEECCCCCEEEECCCCCCEEEEEEEEEEE
VESQEDYQTWLNQAARQPPTPAPNQAVSEYARRQQKEDRAAWKTVPPAPPPVVNYHP
EECHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8383492; 8387368; 8905231 [H]