| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170077351
Identifier: 170077351
GI number: 170077351
Start: 758730
End: 759329
Strand: Reverse
Name: 170077351
Synonym: SYNPCC7002_A0728
Alternate gene names: NA
Gene position: 759329-758730 (Counterclockwise)
Preceding gene: 170077352
Following gene: 170077350
Centisome position: 25.24
GC content: 51.5
Gene sequence:
>600_bases ATGTATTCTGATCTGATCCATCAACTCGATTTGGGGGCAAACGGCTTACCCTACAGCATTCCCATTCACCCGAATCTGGT GCATCTGACCCTGGGGCTGTTCATCATTGGCATTGCTTTCGATATTGTCGGTGTATTTTTTACTTTTGAGCGTCCCATTT TTAAATATCTGGCGATCCCGGCCACCCGCTCTAATTTCTTTGATGTGGGCTGGTACAACATGGTAGCGGCGTCAATCATT ACCTTTTTTACGGTGGCGGCAGGTTTCTACGAAATGCTGTTGATGGATGCCCCGTCTGAGGTAAAAAGTGCCTGGAATTT TACTGCGATAGATACGATGATTTGGCACGGCATCGGCGGCGTGCTGTTACTGGCGTTAATCGTTGGCATGACCGTTTGGC GAGGCTTTCAGCGCTATGTCTGGCGCAGCGATCGCAGTCGGCAGGTGCAGTGGTGGTATCTGCTGGCGGGACTGGTCATT ATGTTTGTAATGTATATCCACGGAACCCTCGGCGCTCAGTTGGCAGCGGAATTTGGGGCGCACAATACGGCGGGTCATCT GCTCCGGCTCGGTGAAGATCCCAATGTGCTGTTGCGGTAG
Upstream 100 bases:
>100_bases TGTTTTTTTCCAGGTTTATCTCGGCGATAAATTGGTCTGGGTTTATGGACTCCACACCACAGAGATTGTCCAAGCAGCGA AAGAGGGACTTTTATAAACG
Downstream 100 bases:
>100_bases GGGTGAGGAACATTAGGCTATGAAATTAAAAACAATTATTTCACTTTCGGCGATCGCCCTACTTTTGGGGGTATTTAGCT ATTGGGTCGGGCAATGGTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 199; Mature: 199
Protein sequence:
>199_residues MYSDLIHQLDLGANGLPYSIPIHPNLVHLTLGLFIIGIAFDIVGVFFTFERPIFKYLAIPATRSNFFDVGWYNMVAASII TFFTVAAGFYEMLLMDAPSEVKSAWNFTAIDTMIWHGIGGVLLLALIVGMTVWRGFQRYVWRSDRSRQVQWWYLLAGLVI MFVMYIHGTLGAQLAAEFGAHNTAGHLLRLGEDPNVLLR
Sequences:
>Translated_199_residues MYSDLIHQLDLGANGLPYSIPIHPNLVHLTLGLFIIGIAFDIVGVFFTFERPIFKYLAIPATRSNFFDVGWYNMVAASII TFFTVAAGFYEMLLMDAPSEVKSAWNFTAIDTMIWHGIGGVLLLALIVGMTVWRGFQRYVWRSDRSRQVQWWYLLAGLVI MFVMYIHGTLGAQLAAEFGAHNTAGHLLRLGEDPNVLLR >Mature_199_residues MYSDLIHQLDLGANGLPYSIPIHPNLVHLTLGLFIIGIAFDIVGVFFTFERPIFKYLAIPATRSNFFDVGWYNMVAASII TFFTVAAGFYEMLLMDAPSEVKSAWNFTAIDTMIWHGIGGVLLLALIVGMTVWRGFQRYVWRSDRSRQVQWWYLLAGLVI MFVMYIHGTLGAQLAAEFGAHNTAGHLLRLGEDPNVLLR
Specific function: Unknown
COG id: COG4244
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22446; Mature: 22446
Theoretical pI: Translated: 6.90; Mature: 6.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYSDLIHQLDLGANGLPYSIPIHPNLVHLTLGLFIIGIAFDIVGVFFTFERPIFKYLAIP CCHHHHHHHHCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC ATRSNFFDVGWYNMVAASIITFFTVAAGFYEMLLMDAPSEVKSAWNFTAIDTMIWHGIGG CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHH VLLLALIVGMTVWRGFQRYVWRSDRSRQVQWWYLLAGLVIMFVMYIHGTLGAQLAAEFGA HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC HNTAGHLLRLGEDPNVLLR CCCCHHHEECCCCCCCCCC >Mature Secondary Structure MYSDLIHQLDLGANGLPYSIPIHPNLVHLTLGLFIIGIAFDIVGVFFTFERPIFKYLAIP CCHHHHHHHHCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC ATRSNFFDVGWYNMVAASIITFFTVAAGFYEMLLMDAPSEVKSAWNFTAIDTMIWHGIGG CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHH VLLLALIVGMTVWRGFQRYVWRSDRSRQVQWWYLLAGLVIMFVMYIHGTLGAQLAAEFGA HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC HNTAGHLLRLGEDPNVLLR CCCCHHHEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA