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The map label for this gene is ctaDII [H]

Identifier: 170077349

GI number: 170077349

Start: 756079

End: 757734

Strand: Reverse

Name: ctaDII [H]

Synonym: SYNPCC7002_A0726

Alternate gene names: 170077349

Gene position: 757734-756079 (Counterclockwise)

Preceding gene: 170077350

Following gene: 170077348

Centisome position: 25.19

GC content: 53.26

Gene sequence:

>1656_bases
ATGACCCAAGCTCCCCCAGAAGCCCTGACCAACGAGGGACAACCCCTCACCAACCTGCCCAACTGGCGAACCTTTTTTTC
CTTTAGTACCGACCACAAAGTAATCGGACTGCAATACATTGTCACGTCCTTTTTCTTTTTCCTCGTCGCCGGAATTTTCG
CGATGATCATGCGGGGGGAACTAATCACCCCAGAGCCGGATCTCGTAGATCGCACCGTTTACAATGCCCTGTTTACGATG
CACGGCAGCATAATGCTGTTTGGCTGGACATTTCCGGTATTGGCAGGTTTCGCGAATTACCTCGTTCCCCTGATGATCGG
GGCACAGGATATGGCATTCCCTCGACTAAATGCGATCGCCTTTTGGATGGTTCCGGTGTTTGGGTCGCTGTTGGTGCTGA
GTTTCCTGGCTCCGGGGGGACCTGCCCAGGCGGGTTGGTGGTCTTATCCTCCGGTGAGTATCCAGAATCCAGCGGGCGTT
TTGCTTAATGGGGAATTTCTCTGGTTGGTTTCCGTGGCGCTATCGGGAATTTCCTCGATCCTGGGGGCGGTGAATATTGT
CACGACCATTGTGCAGATGCGTTGTCCGGGGATGGGCTGGTTTAAGACCCCGGCATTTGTTTGGACGGTGCTAGCGGCTC
AAATTATTCAGCTTTTTGGGTTGCCCGCTTTAACTGCTGGGGCGGTGATGTTGCTCTTCGATCTCACGGTGGGCACAACC
TTTTTCGATGCCTCCCAGGGGGGCAGTCCGGTGCTGTACCAGCACTTTTTCTGGTTCTATTCTCACCCGGCGGTGTACGT
GATGGTGTTGCCGGTGTTTGGCTTTTTCTCGGAATTATTTCCCGTTTACGCCCGCAAGCCCCTGTTTGGCTACAAGGTGG
TTGTCGTTTCCTCGATGATTATTGTTGTCCTTAGTGCGGTGGTCTGGGTTCACCATATGTTCGCGAGTGGGACACCTCCC
TGGATGCGGATGTTGTTTATGTTCTCGACGATGCTGATCTCGGTGCCGACGGGGATTAAAGTGTTTGCCTGGGTGGCGAC
CCTCTGGGGTGGAAAATTGCGCCTGGATACGCCGATGCTCTTTGCGATGGGGGGTCTGATTAACTTCGTTTTTGCAGGAA
TCACGGGGATTATGTTGGCATCGGTTCCGGTGGATATCCATGTGAACAACACCTATTTTGTGGTGGGGCATTTCCACTAT
GTGATCTACGGGGCGATCGTCTTTGGGATCTATGGGGCGGTGTACCACTGGTTCCCGAAAATGACAGGCAAGATGTACTA
CGAGGGTCTGGGGAAACTGCATTTCTGGTTGACGATGATCGGCACAACTTTGAATTTTCTGCCGATGCACCCGGTGGGGT
TGATGGGAATGCCCCGGCGGGTTGCGTCCTATGATCCGGAGTTTGCGTTCTGGAATGTGATTGCAAGTATCGGTGGTTTT
ATCCTTGGCATGTCCACGATTCCTTTTTTGCTCAATATGATTGCGTCCTGGATTAACGGCGATCGCGCTCCCGCAAATCC
CTGGCGGGCGATCGGTTTGGAATGGCTTGTACCTTCTCCCCCGGAACACGAAAATTTCGAGGAGTTGCCCATCGTCATCG
CGGAACCCTATGGCTACGGGAAATCGGAACCCCTCACGGAAAATCTGGGGGGTTAA

Upstream 100 bases:

>100_bases
GTGAATTATCATCCCTGATTTTGTTTATTGACCTTTTTCCTCTGAATTTTTTTGTCAGTCTTCCATAAATTTTCTGTAAT
TCCGTAATCGCTCACAAACC

Downstream 100 bases:

>100_bases
ACCCATGATTTTTTTGTTGTTGCCCCATCACCATTCGTAGGGGCGGTTCGCGAACCGCCCCTACCTAGAAATTCAGTTTT
TTTAACACTGCGATTATTGT

Product: cytochrome oxidase II large subunit

Products: NA

Alternate protein names: Cytochrome aa3 subunit 1; Cytochrome c oxidase polypeptide I; Oxidase aa(3) subunit 1 [H]

Number of amino acids: Translated: 551; Mature: 550

Protein sequence:

>551_residues
MTQAPPEALTNEGQPLTNLPNWRTFFSFSTDHKVIGLQYIVTSFFFFLVAGIFAMIMRGELITPEPDLVDRTVYNALFTM
HGSIMLFGWTFPVLAGFANYLVPLMIGAQDMAFPRLNAIAFWMVPVFGSLLVLSFLAPGGPAQAGWWSYPPVSIQNPAGV
LLNGEFLWLVSVALSGISSILGAVNIVTTIVQMRCPGMGWFKTPAFVWTVLAAQIIQLFGLPALTAGAVMLLFDLTVGTT
FFDASQGGSPVLYQHFFWFYSHPAVYVMVLPVFGFFSELFPVYARKPLFGYKVVVVSSMIIVVLSAVVWVHHMFASGTPP
WMRMLFMFSTMLISVPTGIKVFAWVATLWGGKLRLDTPMLFAMGGLINFVFAGITGIMLASVPVDIHVNNTYFVVGHFHY
VIYGAIVFGIYGAVYHWFPKMTGKMYYEGLGKLHFWLTMIGTTLNFLPMHPVGLMGMPRRVASYDPEFAFWNVIASIGGF
ILGMSTIPFLLNMIASWINGDRAPANPWRAIGLEWLVPSPPEHENFEELPIVIAEPYGYGKSEPLTENLGG

Sequences:

>Translated_551_residues
MTQAPPEALTNEGQPLTNLPNWRTFFSFSTDHKVIGLQYIVTSFFFFLVAGIFAMIMRGELITPEPDLVDRTVYNALFTM
HGSIMLFGWTFPVLAGFANYLVPLMIGAQDMAFPRLNAIAFWMVPVFGSLLVLSFLAPGGPAQAGWWSYPPVSIQNPAGV
LLNGEFLWLVSVALSGISSILGAVNIVTTIVQMRCPGMGWFKTPAFVWTVLAAQIIQLFGLPALTAGAVMLLFDLTVGTT
FFDASQGGSPVLYQHFFWFYSHPAVYVMVLPVFGFFSELFPVYARKPLFGYKVVVVSSMIIVVLSAVVWVHHMFASGTPP
WMRMLFMFSTMLISVPTGIKVFAWVATLWGGKLRLDTPMLFAMGGLINFVFAGITGIMLASVPVDIHVNNTYFVVGHFHY
VIYGAIVFGIYGAVYHWFPKMTGKMYYEGLGKLHFWLTMIGTTLNFLPMHPVGLMGMPRRVASYDPEFAFWNVIASIGGF
ILGMSTIPFLLNMIASWINGDRAPANPWRAIGLEWLVPSPPEHENFEELPIVIAEPYGYGKSEPLTENLGG
>Mature_550_residues
TQAPPEALTNEGQPLTNLPNWRTFFSFSTDHKVIGLQYIVTSFFFFLVAGIFAMIMRGELITPEPDLVDRTVYNALFTMH
GSIMLFGWTFPVLAGFANYLVPLMIGAQDMAFPRLNAIAFWMVPVFGSLLVLSFLAPGGPAQAGWWSYPPVSIQNPAGVL
LNGEFLWLVSVALSGISSILGAVNIVTTIVQMRCPGMGWFKTPAFVWTVLAAQIIQLFGLPALTAGAVMLLFDLTVGTTF
FDASQGGSPVLYQHFFWFYSHPAVYVMVLPVFGFFSELFPVYARKPLFGYKVVVVSSMIIVVLSAVVWVHHMFASGTPPW
MRMLFMFSTMLISVPTGIKVFAWVATLWGGKLRLDTPMLFAMGGLINFVFAGITGIMLASVPVDIHVNNTYFVVGHFHYV
IYGAIVFGIYGAVYHWFPKMTGKMYYEGLGKLHFWLTMIGTTLNFLPMHPVGLMGMPRRVASYDPEFAFWNVIASIGGFI
LGMSTIPFLLNMIASWINGDRAPANPWRAIGLEWLVPSPPEHENFEELPIVIAEPYGYGKSEPLTENLGG

Specific function: Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome

COG id: COG0843

COG function: function code C; Heme/copper-type cytochrome/quinol oxidases, subunit 1

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the heme-copper respiratory oxidase family [H]

Homologues:

Organism=Homo sapiens, GI251831109, Length=505, Percent_Identity=40.3960396039604, Blast_Score=347, Evalue=1e-95,
Organism=Escherichia coli, GI1786634, Length=519, Percent_Identity=37.1868978805395, Blast_Score=336, Evalue=2e-93,
Organism=Saccharomyces cerevisiae, GI6226519, Length=526, Percent_Identity=39.3536121673004, Blast_Score=360, Evalue=1e-100,
Organism=Saccharomyces cerevisiae, GI6226524, Length=322, Percent_Identity=40.6832298136646, Blast_Score=226, Evalue=1e-59,
Organism=Saccharomyces cerevisiae, GI6226523, Length=263, Percent_Identity=37.6425855513308, Blast_Score=150, Evalue=7e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000883
- InterPro:   IPR014241 [H]

Pfam domain/function: PF00115 COX1 [H]

EC number: =1.9.3.1 [H]

Molecular weight: Translated: 61049; Mature: 60918

Theoretical pI: Translated: 6.85; Mature: 6.85

Prosite motif: PS50855 COX1 ; PS00077 COX1_CUB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQAPPEALTNEGQPLTNLPNWRTFFSFSTDHKVIGLQYIVTSFFFFLVAGIFAMIMRGE
CCCCCCHHHCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
LITPEPDLVDRTVYNALFTMHGSIMLFGWTFPVLAGFANYLVPLMIGAQDMAFPRLNAIA
CCCCCCCHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHCCCHHCCCHHHHHH
FWMVPVFGSLLVLSFLAPGGPAQAGWWSYPPVSIQNPAGVLLNGEFLWLVSVALSGISSI
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHH
LGAVNIVTTIVQMRCPGMGWFKTPAFVWTVLAAQIIQLFGLPALTAGAVMLLFDLTVGTT
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCE
FFDASQGGSPVLYQHFFWFYSHPAVYVMVLPVFGFFSELFPVYARKPLFGYKVVVVSSMI
EEECCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
IVVLSAVVWVHHMFASGTPPWMRMLFMFSTMLISVPTGIKVFAWVATLWGGKLRLDTPML
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEECCHHH
FAMGGLINFVFAGITGIMLASVPVDIHVNNTYFVVGHFHYVIYGAIVFGIYGAVYHWFPK
HHHHHHHHHHHHHHHHHHHHHCCEEEEECCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHH
MTGKMYYEGLGKLHFWLTMIGTTLNFLPMHPVGLMGMPRRVASYDPEFAFWNVIASIGGF
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHH
ILGMSTIPFLLNMIASWINGDRAPANPWRAIGLEWLVPSPPEHENFEELPIVIAEPYGYG
HHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCEEEECCCCCCCCCCCCCCEEEECCCCCC
KSEPLTENLGG
CCCCCHHCCCC
>Mature Secondary Structure 
TQAPPEALTNEGQPLTNLPNWRTFFSFSTDHKVIGLQYIVTSFFFFLVAGIFAMIMRGE
CCCCCHHHCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC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CCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8387368; 8905231 [H]