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The map label for this gene is yibQ [H]

Identifier: 170026350

GI number: 170026350

Start: 4575258

End: 4576268

Strand: Direct

Name: yibQ [H]

Synonym: YPK_4143

Alternate gene names: 170026350

Gene position: 4575258-4576268 (Clockwise)

Preceding gene: 229597227

Following gene: 170026353

Centisome position: 97.57

GC content: 49.26

Gene sequence:

>1011_bases
TTGCGCTACTTCAACACACGCCAATTTATCATCGTAAGCACGCTATTCATCGCCAGCACAGCACAGGCCGGCAAACTCTC
TATTGTTATTGACGATTTTGGTTATCGCCCCCAAAACGAAAATAAGATTTTACAGATGCCCCTGCCCATTTCAGTGGCCA
TTCTGCCTAATGCTCCTTACGCCAGAGAGATGGCAACCAAAGCCCATAATCAGGGGCGTGAAATCCTGATTCACTTGCCG
ATGGCCCCACAGAGTAAACAGCCACTGGAGCGTGATACCTTGCAGCCTTCAATGAGCAGCGAGGAAATCCAGCGCATCAT
CCGCCAGGCCGCGAATAACGTCCCTTATGCGAAAGGCATGAATAACCATATGGGCAGTGCGATGACCGCCAGTTTGCCAG
GTATGCAGAAAGTGATGCAGGCACTGGGGAGTTACCAGCTCTATTTTCTCGACAGTGTGACTATTGGTAATAGCCAGGCG
AGCAAAGCCGCCGAAGGCACTGGTGTCAAAGTGATCAAGCGGAAAATCTTTTTAGATGACTCACAAAATGAAGCAGCTAT
CCGTCAACAATTTAACCGGGCAGTAGCACTGGCACGCCGCAATGGCTCAGCGATTGCTATCGGGCACCCTCACCCTGCGA
CCATTAAAGTATTGCAACAAATGTTGCCTCAGTTGCCTGCCGACATCGTCTTAGTCAGACCCAGTGCGCTGCTAAATGAA
CCGGTACAAAGTCTCTCTCCGGACAAAACAAAACCACGTGAACCGGTGAAAGGCCAACGTCTGCCCGCTATCAAGCAATG
TAAAGCGAAAGCCAGCTATGTGCCTGAGAAAATCTACGCTGATAAGCTGTTTATCTTATTGGGTGAGAGCTTGATGCAAA
ACCCGGCGGTCATATTTATTCAGCAACATTGGCAACAATATTTTACGCCAGCGCCGCCGGCAACACCTATTGATGAACAG
AAAGCGATTGAAAATACCGAGAAATTGCCACCCAAGAAGGCGGCACAATAA

Upstream 100 bases:

>100_bases
AGGGCGAGCCATCGCTCTATTTCGAAATCCGCCGTCAGGGACAAGCCGTTAACCCACAGCCCTGGTTAGGAAGATAGGGA
ACAACGTTAGGGAACTCGTA

Downstream 100 bases:

>100_bases
TCGGGAACTCGCTTTATTTTAATCGCTGATATTAATATCAAATTGCGGTAAGGCGGCCACCGCAAAAAACGTAAATCCTG
ACAAGGGCTTGGTATCGCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 336; Mature: 336

Protein sequence:

>336_residues
MRYFNTRQFIIVSTLFIASTAQAGKLSIVIDDFGYRPQNENKILQMPLPISVAILPNAPYAREMATKAHNQGREILIHLP
MAPQSKQPLERDTLQPSMSSEEIQRIIRQAANNVPYAKGMNNHMGSAMTASLPGMQKVMQALGSYQLYFLDSVTIGNSQA
SKAAEGTGVKVIKRKIFLDDSQNEAAIRQQFNRAVALARRNGSAIAIGHPHPATIKVLQQMLPQLPADIVLVRPSALLNE
PVQSLSPDKTKPREPVKGQRLPAIKQCKAKASYVPEKIYADKLFILLGESLMQNPAVIFIQQHWQQYFTPAPPATPIDEQ
KAIENTEKLPPKKAAQ

Sequences:

>Translated_336_residues
MRYFNTRQFIIVSTLFIASTAQAGKLSIVIDDFGYRPQNENKILQMPLPISVAILPNAPYAREMATKAHNQGREILIHLP
MAPQSKQPLERDTLQPSMSSEEIQRIIRQAANNVPYAKGMNNHMGSAMTASLPGMQKVMQALGSYQLYFLDSVTIGNSQA
SKAAEGTGVKVIKRKIFLDDSQNEAAIRQQFNRAVALARRNGSAIAIGHPHPATIKVLQQMLPQLPADIVLVRPSALLNE
PVQSLSPDKTKPREPVKGQRLPAIKQCKAKASYVPEKIYADKLFILLGESLMQNPAVIFIQQHWQQYFTPAPPATPIDEQ
KAIENTEKLPPKKAAQ
>Mature_336_residues
MRYFNTRQFIIVSTLFIASTAQAGKLSIVIDDFGYRPQNENKILQMPLPISVAILPNAPYAREMATKAHNQGREILIHLP
MAPQSKQPLERDTLQPSMSSEEIQRIIRQAANNVPYAKGMNNHMGSAMTASLPGMQKVMQALGSYQLYFLDSVTIGNSQA
SKAAEGTGVKVIKRKIFLDDSQNEAAIRQQFNRAVALARRNGSAIAIGHPHPATIKVLQQMLPQLPADIVLVRPSALLNE
PVQSLSPDKTKPREPVKGQRLPAIKQCKAKASYVPEKIYADKLFILLGESLMQNPAVIFIQQHWQQYFTPAPPATPIDEQ
KAIENTEKLPPKKAAQ

Specific function: Unknown

COG id: COG2861

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0755 [H]

Homologues:

Organism=Escherichia coli, GI87082298, Length=295, Percent_Identity=64.4067796610169, Blast_Score=385, Evalue=1e-108,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006837
- InterPro:   IPR011330
- InterPro:   IPR002509 [H]

Pfam domain/function: PF04748 Polysacc_deac_2 [H]

EC number: NA

Molecular weight: Translated: 37232; Mature: 37232

Theoretical pI: Translated: 10.36; Mature: 10.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYFNTRQFIIVSTLFIASTAQAGKLSIVIDDFGYRPQNENKILQMPLPISVAILPNAPY
CCCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCEEEEECCCEEEEEECCCCH
AREMATKAHNQGREILIHLPMAPQSKQPLERDTLQPSMSSEEIQRIIRQAANNVPYAKGM
HHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCC
NNHMGSAMTASLPGMQKVMQALGSYQLYFLDSVTIGNSQASKAAEGTGVKVIKRKIFLDD
CCCCCCHHHHCCCCHHHHHHHHCCEEEEEEEEEEECCCHHHHHCCCCCHHHHHHHHEECC
SQNEAAIRQQFNRAVALARRNGSAIAIGHPHPATIKVLQQMLPQLPADIVLVRPSALLNE
CCCHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHCCCCEEEECCHHHHHH
PVQSLSPDKTKPREPVKGQRLPAIKQCKAKASYVPEKIYADKLFILLGESLMQNPAVIFI
HHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCHHHHCCCEEEEE
QQHWQQYFTPAPPATPIDEQKAIENTEKLPPKKAAQ
EHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MRYFNTRQFIIVSTLFIASTAQAGKLSIVIDDFGYRPQNENKILQMPLPISVAILPNAPY
CCCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCEEEEECCCEEEEEECCCCH
AREMATKAHNQGREILIHLPMAPQSKQPLERDTLQPSMSSEEIQRIIRQAANNVPYAKGM
HHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCC
NNHMGSAMTASLPGMQKVMQALGSYQLYFLDSVTIGNSQASKAAEGTGVKVIKRKIFLDD
CCCCCCHHHHCCCCHHHHHHHHCCEEEEEEEEEEECCCHHHHHCCCCCHHHHHHHHEECC
SQNEAAIRQQFNRAVALARRNGSAIAIGHPHPATIKVLQQMLPQLPADIVLVRPSALLNE
CCCHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHCCCCEEEECCHHHHHH
PVQSLSPDKTKPREPVKGQRLPAIKQCKAKASYVPEKIYADKLFILLGESLMQNPAVIFI
HHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCHHHHCCCEEEEE
QQHWQQYFTPAPPATPIDEQKAIENTEKLPPKKAAQ
EHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]