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The map label for this gene is 170026327

Identifier: 170026327

GI number: 170026327

Start: 4554199

End: 4554936

Strand: Direct

Name: 170026327

Synonym: YPK_4120

Alternate gene names: NA

Gene position: 4554199-4554936 (Clockwise)

Preceding gene: 170026325

Following gene: 170026328

Centisome position: 97.12

GC content: 51.63

Gene sequence:

>738_bases
ATGGCAATGATTCCACAAAAAACCGCCTTAGTCGTCAGCGCCCATTCGGCAGATTTTGTCTGGCGCGCAGGTGGGGCTAT
CGCTTTACATGTCGAACAAGGGTATCAAGTTCATATTGTCTGCCTCTCTTACGGCGAACGTGGTGAATCCGCCAAATTGT
GGCGTAAAGGCGACATGACGGAAGAAAGAGTAAAAGCAAGCCGCCACACCGAAGCGCAAGCGGCGGCAAATGTTCTTGGT
GCCAGTATTGAGTTTTTCGATATGGGTGACTATCCGTTACGCGCAGATAAAGAAAGCCTGTTCCGTCTGGCAGACGTATT
CCGCCGCATACAGCCCCATTTTGTTCTCACCCATTCGCTGGCCGATCCCTACAACTATGACCATCCCCTAGCGGCTAACC
TGGCTCAAGAAGCTCGCATTATCGCTCAGGCAGAAGGGTATCGACCGGGAGAAGCCATCATTGGTGCGCCACCCGTGTAC
TGCTTCGAGCCGCATCAGCCTGAACAGTGTGGCTGGAAGCCTGACGTATTACTGGATATCACATCAGTATGGGAGAAAAA
ATATGCGGCTATTCAATGCATGGCCGGTCAGGAACATTTGTGGGAATACTACACGCGAGTGGCGTTACAACGTGGGGTAC
AAGCAAAACGCAACATCGGCATTGCCAGTACCAAGACCATTATTCATGGCGAAGGTTATCAAAGCCTCTTCCCTCGCGTC
ACGGAGGATCTGTCATGA

Upstream 100 bases:

>100_bases
AAATAAAACTTGTCGCTTGGGCAATAAAACTCACTATTTCCCATTAATTAAGCCATGCCAGAATCCTAGACAGTTAAAGC
AGCAAAAAAAGGAAAAAGAT

Downstream 100 bases:

>100_bases
GCCTGGTTAATATGAAAGGGGTCGTGGTCACAAACATTGAACGAGCTGAACTAGCCCTGTTACAACGTTTCGCTGAATAT
GGCGTGGCAACAGTGCATGA

Product: LmbE family protein

Products: NA

Alternate protein names: LmbE-Like Protein; N-Acetylglucosaminylphosphatidylinositol De-N-Acetylase; LmbE-Related Protein; GlcNAc-PI De-N-Acetylase

Number of amino acids: Translated: 245; Mature: 244

Protein sequence:

>245_residues
MAMIPQKTALVVSAHSADFVWRAGGAIALHVEQGYQVHIVCLSYGERGESAKLWRKGDMTEERVKASRHTEAQAAANVLG
ASIEFFDMGDYPLRADKESLFRLADVFRRIQPHFVLTHSLADPYNYDHPLAANLAQEARIIAQAEGYRPGEAIIGAPPVY
CFEPHQPEQCGWKPDVLLDITSVWEKKYAAIQCMAGQEHLWEYYTRVALQRGVQAKRNIGIASTKTIIHGEGYQSLFPRV
TEDLS

Sequences:

>Translated_245_residues
MAMIPQKTALVVSAHSADFVWRAGGAIALHVEQGYQVHIVCLSYGERGESAKLWRKGDMTEERVKASRHTEAQAAANVLG
ASIEFFDMGDYPLRADKESLFRLADVFRRIQPHFVLTHSLADPYNYDHPLAANLAQEARIIAQAEGYRPGEAIIGAPPVY
CFEPHQPEQCGWKPDVLLDITSVWEKKYAAIQCMAGQEHLWEYYTRVALQRGVQAKRNIGIASTKTIIHGEGYQSLFPRV
TEDLS
>Mature_244_residues
AMIPQKTALVVSAHSADFVWRAGGAIALHVEQGYQVHIVCLSYGERGESAKLWRKGDMTEERVKASRHTEAQAAANVLGA
SIEFFDMGDYPLRADKESLFRLADVFRRIQPHFVLTHSLADPYNYDHPLAANLAQEARIIAQAEGYRPGEAIIGAPPVYC
FEPHQPEQCGWKPDVLLDITSVWEKKYAAIQCMAGQEHLWEYYTRVALQRGVQAKRNIGIASTKTIIHGEGYQSLFPRVT
EDLS

Specific function: Unknown

COG id: COG2120

COG function: function code S; Uncharacterized proteins, LmbE homologs

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27440; Mature: 27309

Theoretical pI: Translated: 6.67; Mature: 6.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAMIPQKTALVVSAHSADFVWRAGGAIALHVEQGYQVHIVCLSYGERGESAKLWRKGDMT
CCCCCCCCEEEEEECCCCEEEECCCEEEEEECCCCEEEEEEEECCCCCCCCHHEECCCCC
EERVKASRHTEAQAAANVLGASIEFFDMGDYPLRADKESLFRLADVFRRIQPHFVLTHSL
HHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECC
ADPYNYDHPLAANLAQEARIIAQAEGYRPGEAIIGAPPVYCFEPHQPEQCGWKPDVLLDI
CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEECCCCEEEECCCCCHHCCCCCCCEEEH
TSVWEKKYAAIQCMAGQEHLWEYYTRVALQRGVQAKRNIGIASTKTIIHGEGYQSLFPRV
HHHHHHHHHHEEEECCHHHHHHHHHHHHHHHCCHHHHCCCCEECEEEEECCCHHHHHHHH
TEDLS
HHCCC
>Mature Secondary Structure 
AMIPQKTALVVSAHSADFVWRAGGAIALHVEQGYQVHIVCLSYGERGESAKLWRKGDMT
CCCCCCCEEEEEECCCCEEEECCCEEEEEECCCCEEEEEEEECCCCCCCCHHEECCCCC
EERVKASRHTEAQAAANVLGASIEFFDMGDYPLRADKESLFRLADVFRRIQPHFVLTHSL
HHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECC
ADPYNYDHPLAANLAQEARIIAQAEGYRPGEAIIGAPPVYCFEPHQPEQCGWKPDVLLDI
CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEECCCCEEEECCCCCHHCCCCCCCEEEH
TSVWEKKYAAIQCMAGQEHLWEYYTRVALQRGVQAKRNIGIASTKTIIHGEGYQSLFPRV
HHHHHHHHHHEEEECCHHHHHHHHHHHHHHHCCHHHHCCCCEECEEEEECCCHHHHHHHH
TEDLS
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA