| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
Click here to switch to the map view.
The map label for this gene is metL [H]
Identifier: 170026301
GI number: 170026301
Start: 4524556
End: 4526991
Strand: Reverse
Name: metL [H]
Synonym: YPK_4094
Alternate gene names: 170026301
Gene position: 4526991-4524556 (Counterclockwise)
Preceding gene: 170026302
Following gene: 170026300
Centisome position: 96.54
GC content: 52.59
Gene sequence:
>2436_bases ATGAATGCAACAGCGGTAGCAGCGGCGGCAACGGGCCGTCAACTGCATAAATTTGGTGGCAGTAGCCTTGCGGATGTGAA GTGTTATCTACGGGTGGCTAATATTATGGCCAACTACAGTCACCCCGGCGATCTCATGGTGGTGTCTGCTGCCGGGAGCA CGACAAACCAGTTGATCAGTTGGTTGAAACTCAGTCAAAACGACCGTCTTTCTGCTCATCAGGTACAGCAAAGTCTGCGT CGTTATCAACACGATCTGATCAATGGCTTATTGCCTCCAGAAATGGCAGAGCCATTAATCAGTGAGTTTATTCATGATTT AGAGCGCCTGGCGGGCTTGCTGGATAATAAAATTGATGATGTGATTTATGCTGAAGTGGTTGGTCATGGTGAAATTTGGT CAGCCCGCTTGATGTCTGCGCTACTGAATAAGTTGGATATGGATGCCGTCTGGCTTGACGCCCGCCGTTTCCTACGTGCA GAGCGTGCAGCGCAACCACAAATTGATGAAAGCCGCTCTTATCCGTTACTGCAACAATTAATGGCCCAACACCCTCACCA GCGTTTGGTGGTGACTGGTTTTATCTCGCGCAATGAGGCGGGTGAAACGGTCTTGCTTGGCCGTAATGGCAGTGACTATT CGGCGACGCAGGTCGGGGCATTGGCCGGGGCCGAGCGTGTCACCATCTGGAGTGATGTTGCCGGGGTGTACAGTGCCGAT CCACGTAAAGTGAAGGACGCTTGCCTGCTACCATTATTGCGGTTGGATGAAGCCAGTGAACTGGCCCGCCTGGCAGCACC GGTGTTACATACCCGCACATTACAACCGGTTTCTGGTAGTGACATCGATTTGCAATTACGTTGCAGTTATCAGCCGGAGC AGGGGTCAACCCGTATTGAACGTGTGCTGGCTTCGGGATTGGGTGCCAAGATAGTGACCAGCCACGATGATGTTTGCCTG ATTGAATTGCAGATTGCCAGTCACCATGATTTCTCGTTGGCGCAGAAAGAGATCGATCTACTGCTCAAACGTGCGCAAAT CAAACCACTGGCGACCGGTATTCACCCAGATCGTAACCTGCTGCAACTTTGCTATACCTCAGAAGTGGTTAACAGCGCCT TACGGGTGTTGGAAGATGCCGCTCTGCCGGGGAAACTCTCTCTGCGCGAAGGGCTGGCATTGGTCGCACTGGTGGGGGCG GGTGTGAGCAAGAACCCACTTCACAGTCACCGTTTCTACCAACAACTGAAAGATCAGCCAGTTGAGTTTGTCTGGCAGGC CGAAGACGGTATCAGTATGGTGGCCGTCCTGCGTCTTGGGCCGACTGAGCACCTGATTCAAGGGTTGCACCAGTCGTTGT TCCGGGCGGAAAAACGTATTGGTCTGATGCTGTTTGGCAAAGGCAACATTGGTGCTCGCTGGTTGGAGCTGTTTGCCCGT GAGCAGAAAAGTCTTTCGGCCCGCAGTGGTTTTGAATTTGTGCTAGCCGGGGTGGTCGATAGCCGCCGTAGTCTGCTGAG TTACGATGGTTTGGATGCCAGCCGGACGCTGGCATTTTACAACGATGAAGCCAAAGAACAGGATGAAGAATCCCTGTTCT TGTGGATGCGTGCCCACCCGTTTGACGACCTGGTGGTGTTGGATGTGACCGCCAGCCCGTCACTTGCAGAACAATATCTG GATTTTGCCAGTTATGGTTTCCACGTTATCAGCGCGAACAAATTAGCGGGGGCTTCAAGCAGCAATAATTACCGCCAAAT CCGCGATGCGTTTGCGAAAACTGGCCGCCACTGGTTGTATAACGCCACGGTAGGCGCGGGGTTACCGGTTAACCATACGG TGCGCGATCTGCGTGACAGTGGCGACAGTATTTTAGCGATCAGCGGTATTTTCTCTGGCACGCTGTCTTGGTTATTCCTG CAATTTGATGGCTCAGTACCTTTTACCGAGCTGGTAGACCAAGCCTGGCAGCAAGGTTTGACCGAGCCTGATCCAAGGGT TGATCTCTCTGGTCAGGATGTAATGCGTAAGTTGGTGATTTTAGCCCGTGAAGCGGGTTACGACATCGAACCGAATCAGG TGCGGGTGGAGTCGTTGGTGCCTGCTGGCGCAGAGAGTGGGTCGGTTGATCAATTCTTTGAAAACGGCGAGGCATTAAAT CAGCAAATGATTCAGCGTTTAGAAGCCGCGAAGGAGATGGGCTTGGTATTACGCTACGTGGCACGCTTTGATGCTAATGG TAAGGCGCGGGTGGGCGTTGAAGCGGTACGTACCGATCATCCGTTGGCTTCTTTGCTACCGTGCGATAATGTTTTTGCTA TTGAGAGCCGCTGGTATCGCGATAATCCGTTGGTGATTCGCGGCCCAGGCGCTGGCCGTGATGTGACCGCTGGGGCGATT CAATCTGATTTAAACCGCCTATCACAACTGTTGTAA
Upstream 100 bases:
>100_bases TTACTGATAGTTTGTTGCGTATTTCCGTGGGTATTGAAGACAGTGAAGATTTGATTGCTGATTTGGACCACGCGTTCCAA TTGGCAGTAACGAGGTAAGC
Downstream 100 bases:
>100_bases TCCGCTGTTATTCGCCTCTTCTGTTCTGCGCAGGAGAGGCGCATCCCCCGTTACTCGCCAATATGAATTTTTCACGCATT GCGTGTGAATATTAATCATC
Product: bifunctional aspartate kinase II/homoserine dehydrogenase II
Products: NA
Alternate protein names: Aspartokinase II/homoserine dehydrogenase II; AKII-HDII; Aspartokinase; Homoserine dehydrogenase [H]
Number of amino acids: Translated: 811; Mature: 811
Protein sequence:
>811_residues MNATAVAAAATGRQLHKFGGSSLADVKCYLRVANIMANYSHPGDLMVVSAAGSTTNQLISWLKLSQNDRLSAHQVQQSLR RYQHDLINGLLPPEMAEPLISEFIHDLERLAGLLDNKIDDVIYAEVVGHGEIWSARLMSALLNKLDMDAVWLDARRFLRA ERAAQPQIDESRSYPLLQQLMAQHPHQRLVVTGFISRNEAGETVLLGRNGSDYSATQVGALAGAERVTIWSDVAGVYSAD PRKVKDACLLPLLRLDEASELARLAAPVLHTRTLQPVSGSDIDLQLRCSYQPEQGSTRIERVLASGLGAKIVTSHDDVCL IELQIASHHDFSLAQKEIDLLLKRAQIKPLATGIHPDRNLLQLCYTSEVVNSALRVLEDAALPGKLSLREGLALVALVGA GVSKNPLHSHRFYQQLKDQPVEFVWQAEDGISMVAVLRLGPTEHLIQGLHQSLFRAEKRIGLMLFGKGNIGARWLELFAR EQKSLSARSGFEFVLAGVVDSRRSLLSYDGLDASRTLAFYNDEAKEQDEESLFLWMRAHPFDDLVVLDVTASPSLAEQYL DFASYGFHVISANKLAGASSSNNYRQIRDAFAKTGRHWLYNATVGAGLPVNHTVRDLRDSGDSILAISGIFSGTLSWLFL QFDGSVPFTELVDQAWQQGLTEPDPRVDLSGQDVMRKLVILAREAGYDIEPNQVRVESLVPAGAESGSVDQFFENGEALN QQMIQRLEAAKEMGLVLRYVARFDANGKARVGVEAVRTDHPLASLLPCDNVFAIESRWYRDNPLVIRGPGAGRDVTAGAI QSDLNRLSQLL
Sequences:
>Translated_811_residues MNATAVAAAATGRQLHKFGGSSLADVKCYLRVANIMANYSHPGDLMVVSAAGSTTNQLISWLKLSQNDRLSAHQVQQSLR RYQHDLINGLLPPEMAEPLISEFIHDLERLAGLLDNKIDDVIYAEVVGHGEIWSARLMSALLNKLDMDAVWLDARRFLRA ERAAQPQIDESRSYPLLQQLMAQHPHQRLVVTGFISRNEAGETVLLGRNGSDYSATQVGALAGAERVTIWSDVAGVYSAD PRKVKDACLLPLLRLDEASELARLAAPVLHTRTLQPVSGSDIDLQLRCSYQPEQGSTRIERVLASGLGAKIVTSHDDVCL IELQIASHHDFSLAQKEIDLLLKRAQIKPLATGIHPDRNLLQLCYTSEVVNSALRVLEDAALPGKLSLREGLALVALVGA GVSKNPLHSHRFYQQLKDQPVEFVWQAEDGISMVAVLRLGPTEHLIQGLHQSLFRAEKRIGLMLFGKGNIGARWLELFAR EQKSLSARSGFEFVLAGVVDSRRSLLSYDGLDASRTLAFYNDEAKEQDEESLFLWMRAHPFDDLVVLDVTASPSLAEQYL DFASYGFHVISANKLAGASSSNNYRQIRDAFAKTGRHWLYNATVGAGLPVNHTVRDLRDSGDSILAISGIFSGTLSWLFL QFDGSVPFTELVDQAWQQGLTEPDPRVDLSGQDVMRKLVILAREAGYDIEPNQVRVESLVPAGAESGSVDQFFENGEALN QQMIQRLEAAKEMGLVLRYVARFDANGKARVGVEAVRTDHPLASLLPCDNVFAIESRWYRDNPLVIRGPGAGRDVTAGAI QSDLNRLSQLL >Mature_811_residues MNATAVAAAATGRQLHKFGGSSLADVKCYLRVANIMANYSHPGDLMVVSAAGSTTNQLISWLKLSQNDRLSAHQVQQSLR RYQHDLINGLLPPEMAEPLISEFIHDLERLAGLLDNKIDDVIYAEVVGHGEIWSARLMSALLNKLDMDAVWLDARRFLRA ERAAQPQIDESRSYPLLQQLMAQHPHQRLVVTGFISRNEAGETVLLGRNGSDYSATQVGALAGAERVTIWSDVAGVYSAD PRKVKDACLLPLLRLDEASELARLAAPVLHTRTLQPVSGSDIDLQLRCSYQPEQGSTRIERVLASGLGAKIVTSHDDVCL IELQIASHHDFSLAQKEIDLLLKRAQIKPLATGIHPDRNLLQLCYTSEVVNSALRVLEDAALPGKLSLREGLALVALVGA GVSKNPLHSHRFYQQLKDQPVEFVWQAEDGISMVAVLRLGPTEHLIQGLHQSLFRAEKRIGLMLFGKGNIGARWLELFAR EQKSLSARSGFEFVLAGVVDSRRSLLSYDGLDASRTLAFYNDEAKEQDEESLFLWMRAHPFDDLVVLDVTASPSLAEQYL DFASYGFHVISANKLAGASSSNNYRQIRDAFAKTGRHWLYNATVGAGLPVNHTVRDLRDSGDSILAISGIFSGTLSWLFL QFDGSVPFTELVDQAWQQGLTEPDPRVDLSGQDVMRKLVILAREAGYDIEPNQVRVESLVPAGAESGSVDQFFENGEALN QQMIQRLEAAKEMGLVLRYVARFDANGKARVGVEAVRTDHPLASLLPCDNVFAIESRWYRDNPLVIRGPGAGRDVTAGAI QSDLNRLSQLL
Specific function: Catalyzes 2 nonconsecutive reactions in the common biosynthetic pathway leading from Asp to diaminopimelate and Lys, to Met, and to Thr and Ile. [C]
COG id: COG0527
COG function: function code E; Aspartokinases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the homoserine dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI1790376, Length=804, Percent_Identity=83.955223880597, Blast_Score=1402, Evalue=0.0, Organism=Escherichia coli, GI1786183, Length=821, Percent_Identity=30.816077953715, Blast_Score=331, Evalue=1e-91, Organism=Escherichia coli, GI1790455, Length=462, Percent_Identity=27.2727272727273, Blast_Score=127, Evalue=4e-30, Organism=Saccharomyces cerevisiae, GI6322599, Length=345, Percent_Identity=32.463768115942, Blast_Score=159, Evalue=2e-39, Organism=Saccharomyces cerevisiae, GI6320893, Length=502, Percent_Identity=22.9083665338645, Blast_Score=83, Evalue=2e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001048 - InterPro: IPR005106 - InterPro: IPR001341 - InterPro: IPR018042 - InterPro: IPR011147 - InterPro: IPR001342 - InterPro: IPR019811 - InterPro: IPR016040 [H]
Pfam domain/function: PF00696 AA_kinase; PF00742 Homoserine_dh; PF03447 NAD_binding_3 [H]
EC number: =2.7.2.4; =1.1.1.3 [H]
Molecular weight: Translated: 89308; Mature: 89308
Theoretical pI: Translated: 6.06; Mature: 6.06
Prosite motif: PS01042 HOMOSER_DHGENASE ; PS00324 ASPARTOKINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNATAVAAAATGRQLHKFGGSSLADVKCYLRVANIMANYSHPGDLMVVSAAGSTTNQLIS CCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHH WLKLSQNDRLSAHQVQQSLRRYQHDLINGLLPPEMAEPLISEFIHDLERLAGLLDNKIDD HHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHH VIYAEVVGHGEIWSARLMSALLNKLDMDAVWLDARRFLRAERAAQPQIDESRSYPLLQQL HHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH MAQHPHQRLVVTGFISRNEAGETVLLGRNGSDYSATQVGALAGAERVTIWSDVAGVYSAD HHHCCCCEEEEEEEEECCCCCCEEEEECCCCCCCHHHHHHHCCCCEEEEHHHHHHHCCCC PRKVKDACLLPLLRLDEASELARLAAPVLHTRTLQPVSGSDIDLQLRCSYQPEQGSTRIE CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCHHHHH RVLASGLGAKIVTSHDDVCLIELQIASHHDFSLAQKEIDLLLKRAQIKPLATGIHPDRNL HHHHHCCCCEEEECCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCHHHCCCCCCHHH LQLCYTSEVVNSALRVLEDAALPGKLSLREGLALVALVGAGVSKNPLHSHRFYQQLKDQP HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCHHEEHHHCCCCCCCCCHHHHHHHHHCCCC VEFVWQAEDGISMVAVLRLGPTEHLIQGLHQSLFRAEKRIGLMLFGKGNIGARWLELFAR EEEEEECCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHH EQKSLSARSGFEFVLAGVVDSRRSLLSYDGLDASRTLAFYNDEAKEQDEESLFLWMRAHP HHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCEEEEEECCC FDDLVVLDVTASPSLAEQYLDFASYGFHVISANKLAGASSSNNYRQIRDAFAKTGRHWLY CCCEEEEEECCCHHHHHHHHHHHHCCEEEEECCHHCCCCCCCCHHHHHHHHHHCCCCEEE NATVGAGLPVNHTVRDLRDSGDSILAISGIFSGTLSWLFLQFDGSVPFTELVDQAWQQGL EECCCCCCCCHHHHHHHHCCCCCEEEEHHHHHHHEEEEEEEECCCCCHHHHHHHHHHCCC TEPDPRVDLSGQDVMRKLVILAREAGYDIEPNQVRVESLVPAGAESGSVDQFFENGEALN CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEHHHHCCCCCCCCCHHHHHHCHHHHH QQMIQRLEAAKEMGLVLRYVARFDANGKARVGVEAVRTDHPLASLLPCDNVFAIESRWYR HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECHHHHHCCCCHHHHCCCCCEEEECCCEEC DNPLVIRGPGAGRDVTAGAIQSDLNRLSQLL CCCEEEECCCCCCCCHHHHHHHHHHHHHHHC >Mature Secondary Structure MNATAVAAAATGRQLHKFGGSSLADVKCYLRVANIMANYSHPGDLMVVSAAGSTTNQLIS CCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHH WLKLSQNDRLSAHQVQQSLRRYQHDLINGLLPPEMAEPLISEFIHDLERLAGLLDNKIDD HHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHH VIYAEVVGHGEIWSARLMSALLNKLDMDAVWLDARRFLRAERAAQPQIDESRSYPLLQQL HHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH MAQHPHQRLVVTGFISRNEAGETVLLGRNGSDYSATQVGALAGAERVTIWSDVAGVYSAD HHHCCCCEEEEEEEEECCCCCCEEEEECCCCCCCHHHHHHHCCCCEEEEHHHHHHHCCCC PRKVKDACLLPLLRLDEASELARLAAPVLHTRTLQPVSGSDIDLQLRCSYQPEQGSTRIE CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCHHHHH RVLASGLGAKIVTSHDDVCLIELQIASHHDFSLAQKEIDLLLKRAQIKPLATGIHPDRNL HHHHHCCCCEEEECCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCHHHCCCCCCHHH LQLCYTSEVVNSALRVLEDAALPGKLSLREGLALVALVGAGVSKNPLHSHRFYQQLKDQP HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCHHEEHHHCCCCCCCCCHHHHHHHHHCCCC VEFVWQAEDGISMVAVLRLGPTEHLIQGLHQSLFRAEKRIGLMLFGKGNIGARWLELFAR EEEEEECCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHH EQKSLSARSGFEFVLAGVVDSRRSLLSYDGLDASRTLAFYNDEAKEQDEESLFLWMRAHP HHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCEEEEEECCC FDDLVVLDVTASPSLAEQYLDFASYGFHVISANKLAGASSSNNYRQIRDAFAKTGRHWLY CCCEEEEEECCCHHHHHHHHHHHHCCEEEEECCHHCCCCCCCCHHHHHHHHHHCCCCEEE NATVGAGLPVNHTVRDLRDSGDSILAISGIFSGTLSWLFLQFDGSVPFTELVDQAWQQGL EECCCCCCCCHHHHHHHHCCCCCEEEEHHHHHHHEEEEEEEECCCCCHHHHHHHHHHCCC TEPDPRVDLSGQDVMRKLVILAREAGYDIEPNQVRVESLVPAGAESGSVDQFFENGEALN CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEHHHHCCCCCCCCCHHHHHHCHHHHH QQMIQRLEAAKEMGLVLRYVARFDANGKARVGVEAVRTDHPLASLLPCDNVFAIESRWYR HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECHHHHHCCCCHHHHCCCCCEEEECCCEEC DNPLVIRGPGAGRDVTAGAIQSDLNRLSQLL CCCEEEECCCCCCCCHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 6298218; 8346018; 9278503 [H]