Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
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Accession | NC_010465 |
Length | 4,689,441 |
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The map label for this gene is 170026176
Identifier: 170026176
GI number: 170026176
Start: 4375963
End: 4376649
Strand: Direct
Name: 170026176
Synonym: YPK_3965
Alternate gene names: NA
Gene position: 4375963-4376649 (Clockwise)
Preceding gene: 170026175
Following gene: 170026177
Centisome position: 93.32
GC content: 51.38
Gene sequence:
>687_bases ATGAAATACCTTTATTCGATACTCAGCATCGCGCTGTTACTGGCCCCCGGTTCTGCCACTCACGGCCAACTGCTTGCTAC CCCCACCCGTATTGCGGTAGAGGCACAAGAGCTGAAGCGCACCGTGCAGGTGTATAACAGCGGCGATACACCGCTTTATC TGGATATCACATTACAACGTGTGGATAACCCTGGCGTGAACCCTGAACGTAAAACACCCATCAGTGAAATCTCTCAACCT GAAATGATTTTTAATCCTAACCGCATTACGTTAGGGCCGAGACAAAAGCGGGATATTACGCTGATCCCACTCAAATCGCC GGTACAGGAAACCCTTTACCGCCTGTATATCAACCCCGTGCTCAATATCAAAGCGGTTGGCGATGGGGAGGATAAAAGTA AAGTTCATGCCCCGATGACCATCAGCATTGGTTATGGCGTGCTGATTCAGCATTTGCCACCGGCGGCGGCACAAACTCGT CATTGGCAACATCAATGCTCAACCACTGGCGAGCTAACACTCACAGCTACCGGAACGGTACACAGTAAGTTTAAGCAGCT CGAATCGGGCGGTAACGCCGCACTGGCCGACAGTCTAAACCTGTATCCGGGCACCGCGCTCACACTGCCCGTCAAACAAC TCAATGGTGAGGTGGACGGTGAAAAATTTAGTCTTCGCTGCCATTAG
Upstream 100 bases:
>100_bases TAACCGTCCATGGCCCCTCTGGCCGTTACCGCTGTGATATGCACTCGCAACCTACTCATATTTACCTTTGCCACGCCGAT TAATACCGATAGGAACCTTC
Downstream 100 bases:
>100_bases CCTCTTGCCGCTCAGTGCCGCTGGCGTGATCGATATTCAACCACAGGTCGTGGAACTACAGCAGGTAAATACGGTGGTTA CCGTGATCAACCATGGCATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 228; Mature: 228
Protein sequence:
>228_residues MKYLYSILSIALLLAPGSATHGQLLATPTRIAVEAQELKRTVQVYNSGDTPLYLDITLQRVDNPGVNPERKTPISEISQP EMIFNPNRITLGPRQKRDITLIPLKSPVQETLYRLYINPVLNIKAVGDGEDKSKVHAPMTISIGYGVLIQHLPPAAAQTR HWQHQCSTTGELTLTATGTVHSKFKQLESGGNAALADSLNLYPGTALTLPVKQLNGEVDGEKFSLRCH
Sequences:
>Translated_228_residues MKYLYSILSIALLLAPGSATHGQLLATPTRIAVEAQELKRTVQVYNSGDTPLYLDITLQRVDNPGVNPERKTPISEISQP EMIFNPNRITLGPRQKRDITLIPLKSPVQETLYRLYINPVLNIKAVGDGEDKSKVHAPMTISIGYGVLIQHLPPAAAQTR HWQHQCSTTGELTLTATGTVHSKFKQLESGGNAALADSLNLYPGTALTLPVKQLNGEVDGEKFSLRCH >Mature_228_residues MKYLYSILSIALLLAPGSATHGQLLATPTRIAVEAQELKRTVQVYNSGDTPLYLDITLQRVDNPGVNPERKTPISEISQP EMIFNPNRITLGPRQKRDITLIPLKSPVQETLYRLYINPVLNIKAVGDGEDKSKVHAPMTISIGYGVLIQHLPPAAAQTR HWQHQCSTTGELTLTATGTVHSKFKQLESGGNAALADSLNLYPGTALTLPVKQLNGEVDGEKFSLRCH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24969; Mature: 24969
Theoretical pI: Translated: 9.00; Mature: 9.00
Prosite motif: PS00687 ALDEHYDE_DEHYDR_GLU
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYLYSILSIALLLAPGSATHGQLLATPTRIAVEAQELKRTVQVYNSGDTPLYLDITLQR CHHHHHHHHHHHHCCCCCCCCCEEEECCHHEEEEHHHHHHHHHHCCCCCCCEEEEEEEEE VDNPGVNPERKTPISEISQPEMIFNPNRITLGPRQKRDITLIPLKSPVQETLYRLYINPV CCCCCCCCCCCCCHHHCCCCCEEECCCEEEECCCCCCCEEEEECCCCHHHHHHHHHCCCE LNIKAVGDGEDKSKVHAPMTISIGYGVLIQHLPPAAAQTRHWQHQCSTTGELTLTATGTV EEEEEECCCCCCCEEECCEEEECCCHHHHHCCCCHHHHHHHHHHHCCCCCCEEEEECCCH HSKFKQLESGGNAALADSLNLYPGTALTLPVKQLNGEVDGEKFSLRCH HHHHHHHHCCCCEEEECCCCCCCCCEEEEEHHHHCCCCCCCEEEEEEC >Mature Secondary Structure MKYLYSILSIALLLAPGSATHGQLLATPTRIAVEAQELKRTVQVYNSGDTPLYLDITLQR CHHHHHHHHHHHHCCCCCCCCCEEEECCHHEEEEHHHHHHHHHHCCCCCCCEEEEEEEEE VDNPGVNPERKTPISEISQPEMIFNPNRITLGPRQKRDITLIPLKSPVQETLYRLYINPV CCCCCCCCCCCCCHHHCCCCCEEECCCEEEECCCCCCCEEEEECCCCHHHHHHHHHCCCE LNIKAVGDGEDKSKVHAPMTISIGYGVLIQHLPPAAAQTRHWQHQCSTTGELTLTATGTV EEEEEECCCCCCCEEECCEEEECCCHHHHHCCCCHHHHHHHHHHHCCCCCCEEEEECCCH HSKFKQLESGGNAALADSLNLYPGTALTLPVKQLNGEVDGEKFSLRCH HHHHHHHHCCCCEEEECCCCCCCCCEEEEEHHHHCCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA