Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
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Accession | NC_010465 |
Length | 4,689,441 |
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The map label for this gene is 170026175
Identifier: 170026175
GI number: 170026175
Start: 4373630
End: 4375945
Strand: Direct
Name: 170026175
Synonym: YPK_3964
Alternate gene names: NA
Gene position: 4373630-4375945 (Clockwise)
Preceding gene: 170026174
Following gene: 170026176
Centisome position: 93.27
GC content: 48.1
Gene sequence:
>2316_bases ATGGCCTATTATTCAAAAATTAATCATAGCTTACTTTTTACTTTAGCCTTATTCACACTAAAGCTCGCTCATGCAGAAGC AGTTAAAATAGAGTATTTAGTGCCAATGGGGTTTTCCGCGGCTGAAGAGAACAACTCACTTCAGTTATTAGGGGTATTAG ACAGTAAGACATTGCCCAGTCCTATTACCTTCTCAGAAGAAGAACAACAACTGCAATTTAATCAACAAAACTATCGACAT AATAATATTAGTGAAGAATCTATTATTTTATTGGGAGAGATATTATCTCAAATACCGTATTTACAGTGTAAAACCGGCTG TGATTATACTTTATCGGGTCACCGCGTGGCGTTAGATAAAGTGAATAACACATTGACGATCACCAATAATAATAATCGTT ATCTGATGCCAACCACGACATGGGGGTTGGTCAGCAATCAATCTCTCGATTTGCGAATGACAGCAGCCCACTATCGGGCG ATGTCAGTCCGTGGTCAAAGTTACATCGGCTTGCCATGGCAATCTTATGGCTTTGCATCTTGGTTTTATAACGCGATTCA GTCACAGAATACGCTGCAATCACAGAGCACCTATCAGCCCGTTAATCGCCCTCAGTATCAGCGCCTAACCCAAAAAGGGA TCGGCAGTTGGTATTTGCAAAAGAACTTCTCGGCACTCTATTTACGCACCGGTCGGCAAAACAACCTGGATAACAACGCA GGTAGCGTTCACACCCTGATCAACCCTGCGTTGGACCAATTTGTAACACTCGGTAGTCAAAGCTATCTGGCCATCGATAA GCCTTCCACCGGCAGTATCGTGCTCTATGCCGCTCAGGACGGTGACTACGAAATATACCGCGATAATCAGCTCATTCGCC GCATCCCCGCTCAATTGGGTCGCAACGAGATAGATTACAGCCAACTACCAGGGGGCTATTACAACGTTGAGATTCGTTTA GTTGATCGTCTTGGGCGGATCGTCAGCCAGGAAAACCAAACCATCAGCAATATTGGCAATCAGACCAATAATGGTTGGTT TCTGACAATGGGCAAAGGGCCAGCCAAGGGTAAAAAAACGCCCCGCTTAGTCCAGTTTGGACGCAGCAGGGTGATAGAAA GCGTACAAACCAATATCACGCTACTTAAAGATGATGCCCATCACTGGGCCGTGGAAGCGAACGTCTCACGCCCTTTAAGC CTCAATAAGGTGAATATCACCCCAACAGGGGGCTTGATGTCAGGAGAGAAACGCAGTGGAGGTTACGTTCGCTTAAATGG CGGCAACAATACACTGGGTTACTTTTCATTAGCTCGCTATCAGTCACCTTATGTCTCGCGATACGCACCTGACTCTGGCA GTACCTCAGGCTCCTATACCCGGCGTATTGGGCCAACCCAGCTAAGTTATCAATTCAATCAGTACCGCAATAACCGGCAA CACCGTATCCAAAGTGGTTGGGACTGGCAATTACCACAATTTAACCTCGCGTTATCCCTTGGGCTGCAAAATGGTGGGCA ATGGAACAGCCACAATAATTACGGCGTCTTCCTGAACACCACCCTGTCCTTCGGCCAAAGTAACGCCAGCATCAATACGG CTTATACCCAACAACAGTTGAATACCAGCGCCAGTTACCAGAAAGAGTTTATTGATAACTATGGGGCCAGCACTTTGGGT GTCAGTGGTAGTGCCAGCGGGAAACTAAATAGCGTCGGCGGTTTTGCTAAACGCAGCGGGAGCCGGGGGGATATCTCTGG CCGGGTAGGCATTGATAACCAGATAACCAACGGGGGGATTAGCTATAACGGCATGTTGGCACTCAGCTCACAGGGGGTTG CCTTGGGGCGCAGCAGTTATAGCGGAGCGGCACTCTTGATCAAAGCCCCCGCTCTGGGCGGCACCCCCTATAGTTTTCAT GTGGAGGATAGCCCAATAACCGGTGGTGGCACCTATGCGATACCGGTCCCCCGCTACCAAGACCGTTTCTTTGTCCGTAC TCACACCGACCGCAGTGATATGGATATGAATATTCAACTGCCGGTCAATATTGTACGCGCTCACCCTGGGCAAGTTTTTT CAGGCGAAGCTGACATCACATTAAATCTGCTATACAGCGGTTTTCTCAAGAATGCACAAGGGCTACCGGTGAGCGGGGTG ATTGAGGAGACGGGTGATACCGCTTATCCCAATGGGCTGTTTTCCATTAACGCCCAAAATAGGCTGCAAGCGATAACCGT CCATGGCCCCTCTGGCCGTTACCGCTGTGATATGCACTCGCAACCTACTCATATTTACCTTTGCCACGCCGATTAA
Upstream 100 bases:
>100_bases CCTGCAATTCGAATTATTTTGGGTATATACACAAATTATTTCTTTTAAAAATAAATAATTATCCTGTAAAACCACCATAA TTATAGTGGAATGGAATCCT
Downstream 100 bases:
>100_bases TACCGATAGGAACCTTCATGAAATACCTTTATTCGATACTCAGCATCGCGCTGTTACTGGCCCCCGGTTCTGCCACTCAC GGCCAACTGCTTGCTACCCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 771; Mature: 770
Protein sequence:
>771_residues MAYYSKINHSLLFTLALFTLKLAHAEAVKIEYLVPMGFSAAEENNSLQLLGVLDSKTLPSPITFSEEEQQLQFNQQNYRH NNISEESIILLGEILSQIPYLQCKTGCDYTLSGHRVALDKVNNTLTITNNNNRYLMPTTTWGLVSNQSLDLRMTAAHYRA MSVRGQSYIGLPWQSYGFASWFYNAIQSQNTLQSQSTYQPVNRPQYQRLTQKGIGSWYLQKNFSALYLRTGRQNNLDNNA GSVHTLINPALDQFVTLGSQSYLAIDKPSTGSIVLYAAQDGDYEIYRDNQLIRRIPAQLGRNEIDYSQLPGGYYNVEIRL VDRLGRIVSQENQTISNIGNQTNNGWFLTMGKGPAKGKKTPRLVQFGRSRVIESVQTNITLLKDDAHHWAVEANVSRPLS LNKVNITPTGGLMSGEKRSGGYVRLNGGNNTLGYFSLARYQSPYVSRYAPDSGSTSGSYTRRIGPTQLSYQFNQYRNNRQ HRIQSGWDWQLPQFNLALSLGLQNGGQWNSHNNYGVFLNTTLSFGQSNASINTAYTQQQLNTSASYQKEFIDNYGASTLG VSGSASGKLNSVGGFAKRSGSRGDISGRVGIDNQITNGGISYNGMLALSSQGVALGRSSYSGAALLIKAPALGGTPYSFH VEDSPITGGGTYAIPVPRYQDRFFVRTHTDRSDMDMNIQLPVNIVRAHPGQVFSGEADITLNLLYSGFLKNAQGLPVSGV IEETGDTAYPNGLFSINAQNRLQAITVHGPSGRYRCDMHSQPTHIYLCHAD
Sequences:
>Translated_771_residues MAYYSKINHSLLFTLALFTLKLAHAEAVKIEYLVPMGFSAAEENNSLQLLGVLDSKTLPSPITFSEEEQQLQFNQQNYRH NNISEESIILLGEILSQIPYLQCKTGCDYTLSGHRVALDKVNNTLTITNNNNRYLMPTTTWGLVSNQSLDLRMTAAHYRA MSVRGQSYIGLPWQSYGFASWFYNAIQSQNTLQSQSTYQPVNRPQYQRLTQKGIGSWYLQKNFSALYLRTGRQNNLDNNA GSVHTLINPALDQFVTLGSQSYLAIDKPSTGSIVLYAAQDGDYEIYRDNQLIRRIPAQLGRNEIDYSQLPGGYYNVEIRL VDRLGRIVSQENQTISNIGNQTNNGWFLTMGKGPAKGKKTPRLVQFGRSRVIESVQTNITLLKDDAHHWAVEANVSRPLS LNKVNITPTGGLMSGEKRSGGYVRLNGGNNTLGYFSLARYQSPYVSRYAPDSGSTSGSYTRRIGPTQLSYQFNQYRNNRQ HRIQSGWDWQLPQFNLALSLGLQNGGQWNSHNNYGVFLNTTLSFGQSNASINTAYTQQQLNTSASYQKEFIDNYGASTLG VSGSASGKLNSVGGFAKRSGSRGDISGRVGIDNQITNGGISYNGMLALSSQGVALGRSSYSGAALLIKAPALGGTPYSFH VEDSPITGGGTYAIPVPRYQDRFFVRTHTDRSDMDMNIQLPVNIVRAHPGQVFSGEADITLNLLYSGFLKNAQGLPVSGV IEETGDTAYPNGLFSINAQNRLQAITVHGPSGRYRCDMHSQPTHIYLCHAD >Mature_770_residues AYYSKINHSLLFTLALFTLKLAHAEAVKIEYLVPMGFSAAEENNSLQLLGVLDSKTLPSPITFSEEEQQLQFNQQNYRHN NISEESIILLGEILSQIPYLQCKTGCDYTLSGHRVALDKVNNTLTITNNNNRYLMPTTTWGLVSNQSLDLRMTAAHYRAM SVRGQSYIGLPWQSYGFASWFYNAIQSQNTLQSQSTYQPVNRPQYQRLTQKGIGSWYLQKNFSALYLRTGRQNNLDNNAG SVHTLINPALDQFVTLGSQSYLAIDKPSTGSIVLYAAQDGDYEIYRDNQLIRRIPAQLGRNEIDYSQLPGGYYNVEIRLV DRLGRIVSQENQTISNIGNQTNNGWFLTMGKGPAKGKKTPRLVQFGRSRVIESVQTNITLLKDDAHHWAVEANVSRPLSL NKVNITPTGGLMSGEKRSGGYVRLNGGNNTLGYFSLARYQSPYVSRYAPDSGSTSGSYTRRIGPTQLSYQFNQYRNNRQH RIQSGWDWQLPQFNLALSLGLQNGGQWNSHNNYGVFLNTTLSFGQSNASINTAYTQQQLNTSASYQKEFIDNYGASTLGV SGSASGKLNSVGGFAKRSGSRGDISGRVGIDNQITNGGISYNGMLALSSQGVALGRSSYSGAALLIKAPALGGTPYSFHV EDSPITGGGTYAIPVPRYQDRFFVRTHTDRSDMDMNIQLPVNIVRAHPGQVFSGEADITLNLLYSGFLKNAQGLPVSGVI EETGDTAYPNGLFSINAQNRLQAITVHGPSGRYRCDMHSQPTHIYLCHAD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 85257; Mature: 85126
Theoretical pI: Translated: 9.44; Mature: 9.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYYSKINHSLLFTLALFTLKLAHAEAVKIEYLVPMGFSAAEENNSLQLLGVLDSKTLPS CCCHHHHCHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCEEEEEEECCCCCCC PITFSEEEQQLQFNQQNYRHNNISEESIILLGEILSQIPYLQCKTGCDYTLSGHRVALDK CCCCCCHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHCCCEEECCCCCEEECCCEEEEEE VNNTLTITNNNNRYLMPTTTWGLVSNQSLDLRMTAAHYRAMSVRGQSYIGLPWQSYGFAS CCCEEEEEECCCEEEEEECEECEEECCCCEEEEEHHHEEEEEECCCEEECCCCCCCCHHH WFYNAIQSQNTLQSQSTYQPVNRPQYQRLTQKGIGSWYLQKNFSALYLRTGRQNNLDNNA HHHHHHHCCCHHCCCCCCCCCCCHHHHHHHHHCCCEEEEECCCEEEEEECCCCCCCCCCC GSVHTLINPALDQFVTLGSQSYLAIDKPSTGSIVLYAAQDGDYEIYRDNQLIRRIPAQLG CCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCEEEEEECCCCEEEEECCHHHHHHHHHHC RNEIDYSQLPGGYYNVEIRLVDRLGRIVSQENQTISNIGNQTNNGWFLTMGKGPAKGKKT CCCCCHHHCCCCEEEEEEEEHHHHHHHHCCCCCHHHHCCCCCCCCEEEEECCCCCCCCCC PRLVQFGRSRVIESVQTNITLLKDDAHHWAVEANVSRPLSLNKVNITPTGGLMSGEKRSG HHHHHHHHHHHHHHHHCCEEEEECCCCEEEEEECCCCCEEEEEEEECCCCCCCCCCCCCC GYVRLNGGNNTLGYFSLARYQSPYVSRYAPDSGSTSGSYTRRIGPTQLSYQFNQYRNNRQ CEEEECCCCCCEEEEEEEHHCCCCHHEECCCCCCCCCCEEEECCCCEEEEEHHHHCCCCH HRIQSGWDWQLPQFNLALSLGLQNGGQWNSHNNYGVFLNTTLSFGQSNASINTAYTQQQL HCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCEEEEEEEEEECCCCCCEEEEHHHHHHH NTSASYQKEFIDNYGASTLGVSGSASGKLNSVGGFAKRSGSRGDISGRVGIDNQITNGGI CCCHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCHHHCCCCCCCCCEEECCCCCCCCCCC SYNGMLALSSQGVALGRSSYSGAALLIKAPALGGTPYSFHVEDSPITGGGTYAIPVPRYQ CCCEEEEECCCCEEEECCCCCCEEEEEECCCCCCCCEEEEECCCCCCCCCEEEEECCCCC DRFFVRTHTDRSDMDMNIQLPVNIVRAHPGQVFSGEADITLNLLYSGFLKNAQGLPVSGV CEEEEEEECCCCCCCEEEEECEEEEECCCCCEECCCCCEEEEEEHHHHHCCCCCCCCCCC IEETGDTAYPNGLFSINAQNRLQAITVHGPSGRYRCDMHSQPTHIYLCHAD CCCCCCCCCCCCEEEEECCCCEEEEEEECCCCCEEECCCCCCCEEEEEECC >Mature Secondary Structure AYYSKINHSLLFTLALFTLKLAHAEAVKIEYLVPMGFSAAEENNSLQLLGVLDSKTLPS CCHHHHCHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCEEEEEEECCCCCCC PITFSEEEQQLQFNQQNYRHNNISEESIILLGEILSQIPYLQCKTGCDYTLSGHRVALDK CCCCCCHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHCCCEEECCCCCEEECCCEEEEEE VNNTLTITNNNNRYLMPTTTWGLVSNQSLDLRMTAAHYRAMSVRGQSYIGLPWQSYGFAS CCCEEEEEECCCEEEEEECEECEEECCCCEEEEEHHHEEEEEECCCEEECCCCCCCCHHH WFYNAIQSQNTLQSQSTYQPVNRPQYQRLTQKGIGSWYLQKNFSALYLRTGRQNNLDNNA HHHHHHHCCCHHCCCCCCCCCCCHHHHHHHHHCCCEEEEECCCEEEEEECCCCCCCCCCC GSVHTLINPALDQFVTLGSQSYLAIDKPSTGSIVLYAAQDGDYEIYRDNQLIRRIPAQLG CCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCEEEEEECCCCEEEEECCHHHHHHHHHHC RNEIDYSQLPGGYYNVEIRLVDRLGRIVSQENQTISNIGNQTNNGWFLTMGKGPAKGKKT CCCCCHHHCCCCEEEEEEEEHHHHHHHHCCCCCHHHHCCCCCCCCEEEEECCCCCCCCCC PRLVQFGRSRVIESVQTNITLLKDDAHHWAVEANVSRPLSLNKVNITPTGGLMSGEKRSG HHHHHHHHHHHHHHHHCCEEEEECCCCEEEEEECCCCCEEEEEEEECCCCCCCCCCCCCC GYVRLNGGNNTLGYFSLARYQSPYVSRYAPDSGSTSGSYTRRIGPTQLSYQFNQYRNNRQ CEEEECCCCCCEEEEEEEHHCCCCHHEECCCCCCCCCCEEEECCCCEEEEEHHHHCCCCH HRIQSGWDWQLPQFNLALSLGLQNGGQWNSHNNYGVFLNTTLSFGQSNASINTAYTQQQL HCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCEEEEEEEEEECCCCCCEEEEHHHHHHH NTSASYQKEFIDNYGASTLGVSGSASGKLNSVGGFAKRSGSRGDISGRVGIDNQITNGGI CCCHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCHHHCCCCCCCCCEEECCCCCCCCCCC SYNGMLALSSQGVALGRSSYSGAALLIKAPALGGTPYSFHVEDSPITGGGTYAIPVPRYQ CCCEEEEECCCCEEEECCCCCCEEEEEECCCCCCCCEEEEECCCCCCCCCEEEEECCCCC DRFFVRTHTDRSDMDMNIQLPVNIVRAHPGQVFSGEADITLNLLYSGFLKNAQGLPVSGV CEEEEEEECCCCCCCEEEEECEEEEECCCCCEECCCCCEEEEEEHHHHHCCCCCCCCCCC IEETGDTAYPNGLFSINAQNRLQAITVHGPSGRYRCDMHSQPTHIYLCHAD CCCCCCCCCCCCEEEEECCCCEEEEEEECCCCCEEECCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA