Definition Yersinia pseudotuberculosis YPIII chromosome, complete genome.
Accession NC_010465
Length 4,689,441

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The map label for this gene is 170026177

Identifier: 170026177

GI number: 170026177

Start: 4376621

End: 4377268

Strand: Direct

Name: 170026177

Synonym: YPK_3966

Alternate gene names: NA

Gene position: 4376621-4377268 (Clockwise)

Preceding gene: 170026176

Following gene: 170026178

Centisome position: 93.33

GC content: 50.46

Gene sequence:

>648_bases
GTGAAAAATTTAGTCTTCGCTGCCATTAGCCTCTTGCCGCTCAGTGCCGCTGGCGTGATCGATATTCAACCACAGGTCGT
GGAACTACAGCAGGTAAATACGGTGGTTACCGTGATCAACCATGGCATGACTGCTGAATATATTACGGTGCAGTTATATC
GGTTAAATAACCCTGGTGTCGCCCCTGAATTGGAATCGCTGACCCCTGTTGGCTACCAGCAGCAGCCCTTACTTTTTGCC
ACACCGCTGAAACTGACGCTAGGCCCTCGACAGAGTGGGAAAATTTTTCTACATGCCTTAGGGGCACCGGAACAAGAGCA
GGTTTATCGGTTAGCCGTGGTACCAAGCAACCACCTGAAAATCAGTGGCAATAATACGGCTGTCGTGGGTGTGCAGATCA
GTTATATGGGGCTTATCAGGCACCTGCCAGCATCAATACAACATCAATGGACACACCGTTGTATCGCGGGGAAGCCTGAA
TTACACAATACCGGCAATACCCGCCTGTACTGGCATCAACTGCAAGCACAGGGGCAAATGATAGACGATTTTACGCTCTA
CCCCGGTCGGTATCGGCAGTTAGCTTTCAATGAGTTGCAAGGAAAAGTAGAGGATCAGGCGGTTAGCCTACAGTGCCCTT
CGGGCTAG

Upstream 100 bases:

>100_bases
CTCGAATCGGGCGGTAACGCCGCACTGGCCGACAGTCTAAACCTGTATCCGGGCACCGCGCTCACACTGCCCGTCAAACA
ACTCAATGGTGAGGTGGACG

Downstream 100 bases:

>100_bases
CCTCTTGGTAATAAGCTATCAACAAATTTATCAGCATCAAGAAGAAGGACAAACCAGAAACATGAATACCATAAAAATGG
CCATCACATTGCTATTGCTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 215; Mature: 215

Protein sequence:

>215_residues
MKNLVFAAISLLPLSAAGVIDIQPQVVELQQVNTVVTVINHGMTAEYITVQLYRLNNPGVAPELESLTPVGYQQQPLLFA
TPLKLTLGPRQSGKIFLHALGAPEQEQVYRLAVVPSNHLKISGNNTAVVGVQISYMGLIRHLPASIQHQWTHRCIAGKPE
LHNTGNTRLYWHQLQAQGQMIDDFTLYPGRYRQLAFNELQGKVEDQAVSLQCPSG

Sequences:

>Translated_215_residues
MKNLVFAAISLLPLSAAGVIDIQPQVVELQQVNTVVTVINHGMTAEYITVQLYRLNNPGVAPELESLTPVGYQQQPLLFA
TPLKLTLGPRQSGKIFLHALGAPEQEQVYRLAVVPSNHLKISGNNTAVVGVQISYMGLIRHLPASIQHQWTHRCIAGKPE
LHNTGNTRLYWHQLQAQGQMIDDFTLYPGRYRQLAFNELQGKVEDQAVSLQCPSG
>Mature_215_residues
MKNLVFAAISLLPLSAAGVIDIQPQVVELQQVNTVVTVINHGMTAEYITVQLYRLNNPGVAPELESLTPVGYQQQPLLFA
TPLKLTLGPRQSGKIFLHALGAPEQEQVYRLAVVPSNHLKISGNNTAVVGVQISYMGLIRHLPASIQHQWTHRCIAGKPE
LHNTGNTRLYWHQLQAQGQMIDDFTLYPGRYRQLAFNELQGKVEDQAVSLQCPSG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23766; Mature: 23766

Theoretical pI: Translated: 8.24; Mature: 8.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNLVFAAISLLPLSAAGVIDIQPQVVELQQVNTVVTVINHGMTAEYITVQLYRLNNPGV
CCCHHEEHHHHHCCCCCCEEECCCCEEEHHHHHEEEEECCCCCCEEEEEEEEEEECCCCC
APELESLTPVGYQQQPLLFATPLKLTLGPRQSGKIFLHALGAPEQEQVYRLAVVPSNHLK
CCCCHHCCCCCCCCCCEEEECCEEEEECCCCCCCEEEEECCCCCHHHEEEEEEECCCCEE
ISGNNTAVVGVQISYMGLIRHLPASIQHQWTHRCIAGKPELHNTGNTRLYWHQLQAQGQM
ECCCCEEEEEEEEHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCE
IDDFTLYPGRYRQLAFNELQGKVEDQAVSLQCPSG
EEEEEECCCCHHHHHHHHHCCCCCCCEEEEECCCC
>Mature Secondary Structure
MKNLVFAAISLLPLSAAGVIDIQPQVVELQQVNTVVTVINHGMTAEYITVQLYRLNNPGV
CCCHHEEHHHHHCCCCCCEEECCCCEEEHHHHHEEEEECCCCCCEEEEEEEEEEECCCCC
APELESLTPVGYQQQPLLFATPLKLTLGPRQSGKIFLHALGAPEQEQVYRLAVVPSNHLK
CCCCHHCCCCCCCCCCEEEECCEEEEECCCCCCCEEEEECCCCCHHHEEEEEEECCCCEE
ISGNNTAVVGVQISYMGLIRHLPASIQHQWTHRCIAGKPELHNTGNTRLYWHQLQAQGQM
ECCCCEEEEEEEEHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCE
IDDFTLYPGRYRQLAFNELQGKVEDQAVSLQCPSG
EEEEEECCCCHHHHHHHHHCCCCCCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA