| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is 170026174
Identifier: 170026174
GI number: 170026174
Start: 4372875
End: 4373363
Strand: Direct
Name: 170026174
Synonym: YPK_3963
Alternate gene names: NA
Gene position: 4372875-4373363 (Clockwise)
Preceding gene: 170026164
Following gene: 170026175
Centisome position: 93.25
GC content: 41.51
Gene sequence:
>489_bases ATGAAGAAAACTGTTATTGCTATTATCACTATGGCCACATTGACCAGCACTGCGGCTTATGCAAACACAATAGAGAAAGA TATTCGTGTTGAAGCAGAAATTATTTCTCTCATGGACGTGAAGAGAGCTGATGATAGCAATATTAATAAAATAAAATTAA CCTATGACACGGTAACGAATGATGGTACGTATAGCCATTCAGAAGCAATTAAAGTAAAAGCACGTAAACAACTCGGAGAT AAGCTAAAAGTGTCTCTTGCCGCACCGGTTATCTTAAGCGAGCCAAATAACAATAAAGAGTTTACTCACGTTGAAGTATT GTTAGATGGGAAGAAGCTGCTTGAGACGGCCGACACACGAGACCTGATTACCTTCCATGGCTCTGAGCTCAACGCAGAAC TAAAAGTCAGCGCCAAAGAGCCTAATAATGCCGTCGGTGGTGAAAAGTATAGCGGGGTAATTCAATTGCGCCTGGAGCCA AGCGCTTAA
Upstream 100 bases:
>100_bases ACCCTCATTTTATATTACGCCACCAACATCAACCCTAATAAATCACAATGCCATTCCATTTTGGATGGGTTTTTACATAA AGGACTATCAGGTATTTATG
Downstream 100 bases:
>100_bases TTTAGTTTGTTTCAATACAGTTTGTTAATTTAATGAATACAGCCATGGAATTATCTCCTGGCTGTATATATCCGTCATAC TTCAAGCTGCATGTGCGTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 162; Mature: 162
Protein sequence:
>162_residues MKKTVIAIITMATLTSTAAYANTIEKDIRVEAEIISLMDVKRADDSNINKIKLTYDTVTNDGTYSHSEAIKVKARKQLGD KLKVSLAAPVILSEPNNNKEFTHVEVLLDGKKLLETADTRDLITFHGSELNAELKVSAKEPNNAVGGEKYSGVIQLRLEP SA
Sequences:
>Translated_162_residues MKKTVIAIITMATLTSTAAYANTIEKDIRVEAEIISLMDVKRADDSNINKIKLTYDTVTNDGTYSHSEAIKVKARKQLGD KLKVSLAAPVILSEPNNNKEFTHVEVLLDGKKLLETADTRDLITFHGSELNAELKVSAKEPNNAVGGEKYSGVIQLRLEP SA >Mature_162_residues MKKTVIAIITMATLTSTAAYANTIEKDIRVEAEIISLMDVKRADDSNINKIKLTYDTVTNDGTYSHSEAIKVKARKQLGD KLKVSLAAPVILSEPNNNKEFTHVEVLLDGKKLLETADTRDLITFHGSELNAELKVSAKEPNNAVGGEKYSGVIQLRLEP SA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17726; Mature: 17726
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKTVIAIITMATLTSTAAYANTIEKDIRVEAEIISLMDVKRADDSNINKIKLTYDTVTN CCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECC DGTYSHSEAIKVKARKQLGDKLKVSLAAPVILSEPNNNKEFTHVEVLLDGKKLLETADTR CCCCCCCCEEEEEEHHHCCCEEEEEEECCEEEECCCCCCCEEEEEEEECCHHHHHCCCCC DLITFHGSELNAELKVSAKEPNNAVGGEKYSGVIQLRLEPSA EEEEEECCCCCEEEEEEECCCCCCCCCCCCCCEEEEEECCCC >Mature Secondary Structure MKKTVIAIITMATLTSTAAYANTIEKDIRVEAEIISLMDVKRADDSNINKIKLTYDTVTN CCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECC DGTYSHSEAIKVKARKQLGDKLKVSLAAPVILSEPNNNKEFTHVEVLLDGKKLLETADTR CCCCCCCCEEEEEEHHHCCCEEEEEEECCEEEECCCCCCCEEEEEEEECCHHHHHCCCCC DLITFHGSELNAELKVSAKEPNNAVGGEKYSGVIQLRLEPSA EEEEEECCCCCEEEEEEECCCCCCCCCCCCCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA