| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is qorA [H]
Identifier: 170026069
GI number: 170026069
Start: 4248397
End: 4249380
Strand: Direct
Name: qorA [H]
Synonym: YPK_3856
Alternate gene names: 170026069
Gene position: 4248397-4249380 (Clockwise)
Preceding gene: 170026064
Following gene: 170026072
Centisome position: 90.59
GC content: 54.07
Gene sequence:
>984_bases ATGGCAAAGCATATTCAATTTACCACCACGGGTGGACCAGATGTATTGCAATATCTTGAATTCACCCCCTCAGACCCCGC CCCCCATGAAGTCCAGGTCGAAAATAAAGCTATCGGTATCAATTATATCGATACTTATGTCCGCAGCGGGCTTTATCCTC CTGCCCATTTGCCCAGTGGTTTAGGTACAGAAGCGGCCGGTATCGTCAGTAAAGTGGGGGCGGCGGTCAGTTCCGTGAAG GTCGGTGATCGGGTGGTGTATGCCCAATCCGCTCTCGGTGCTTACAGCGAAGTGCATAATGTTCCAGCGGATAAAATCGC CTTACTGCCGGAGCAGATCTCTTTTGAACAAGCGGCAGCCTCGTTTTTAAAAGGGCTGACTGCCTATTATTTGTTGCGCC AGACCCACGAGATTAAACCGGGGGAAGTGTTCCTGTTCCACGCTGCGGCGGGAGGGGTTGGGCTGATTGCCTGCCAATGG GCCAAAGCACTGGGTGCCAAATTGATCGGCACGGTGGGATCCGATGAGAAAGCCCAATTGGCCAAAGCGGCCGGGGCTTG GGCGACCATCAACTATCGGACAGAAAATATTGCTCAGCGGGTGGCCGAGCTAACCGAGGGTGAGAAAGTAGGCGTCGTGT ATGACTCGGTTGGGAAAAGCACTTGGGAAGCCTCGCTTGATAGCTTAAAGCGCCGGGGCCTGCTGGTTAGCTTTGGTAAT GCCTCTGGGCCGGTAACGGGTGTCAACCTCGGGATTCTAAACCAAAAAGGGGGGATCTATGTCACCCGCCCTTCACTGAA TGTCTATGTCGCCAACCGGCAAGAACTGGAAAGCGCCAGCCAGCAACTCTTTTCAATGATTACCAGTGGGGCGATTAATG TGGATGTTGCTCAAGCGCAGCAATTCCCGCTATGTGACGCACAACGCGCCCATGAAACACTCGAGGGCCGCCAGACGACA GGCTCCAGCTTGCTGATCCCGTAA
Upstream 100 bases:
>100_bases GCACAAATCCCGATAAGCTGATATCCGTCAGTGAGTCAGGTAAGTGAACAGAGCGGCCCTTGTAACCTCAAGTAAGAAGG CTATACCTCGAGGAACTGAC
Downstream 100 bases:
>100_bases GTTTAGATGATTGAAAATGAGTTTACATGATTGAAAAACAGAGGGCCCCGATTAAGGAGCCCTCTGTCATTACACTTTCT TTGATGCATATGTAGGGGTA
Product: quinone oxidoreductase, NADPH-dependent
Products: NA
Alternate protein names: NADPH:quinone reductase 1; Zeta-crystallin homolog protein [H]
Number of amino acids: Translated: 327; Mature: 326
Protein sequence:
>327_residues MAKHIQFTTTGGPDVLQYLEFTPSDPAPHEVQVENKAIGINYIDTYVRSGLYPPAHLPSGLGTEAAGIVSKVGAAVSSVK VGDRVVYAQSALGAYSEVHNVPADKIALLPEQISFEQAAASFLKGLTAYYLLRQTHEIKPGEVFLFHAAAGGVGLIACQW AKALGAKLIGTVGSDEKAQLAKAAGAWATINYRTENIAQRVAELTEGEKVGVVYDSVGKSTWEASLDSLKRRGLLVSFGN ASGPVTGVNLGILNQKGGIYVTRPSLNVYVANRQELESASQQLFSMITSGAINVDVAQAQQFPLCDAQRAHETLEGRQTT GSSLLIP
Sequences:
>Translated_327_residues MAKHIQFTTTGGPDVLQYLEFTPSDPAPHEVQVENKAIGINYIDTYVRSGLYPPAHLPSGLGTEAAGIVSKVGAAVSSVK VGDRVVYAQSALGAYSEVHNVPADKIALLPEQISFEQAAASFLKGLTAYYLLRQTHEIKPGEVFLFHAAAGGVGLIACQW AKALGAKLIGTVGSDEKAQLAKAAGAWATINYRTENIAQRVAELTEGEKVGVVYDSVGKSTWEASLDSLKRRGLLVSFGN ASGPVTGVNLGILNQKGGIYVTRPSLNVYVANRQELESASQQLFSMITSGAINVDVAQAQQFPLCDAQRAHETLEGRQTT GSSLLIP >Mature_326_residues AKHIQFTTTGGPDVLQYLEFTPSDPAPHEVQVENKAIGINYIDTYVRSGLYPPAHLPSGLGTEAAGIVSKVGAAVSSVKV GDRVVYAQSALGAYSEVHNVPADKIALLPEQISFEQAAASFLKGLTAYYLLRQTHEIKPGEVFLFHAAAGGVGLIACQWA KALGAKLIGTVGSDEKAQLAKAAGAWATINYRTENIAQRVAELTEGEKVGVVYDSVGKSTWEASLDSLKRRGLLVSFGNA SGPVTGVNLGILNQKGGIYVTRPSLNVYVANRQELESASQQLFSMITSGAINVDVAQAQQFPLCDAQRAHETLEGRQTTG SSLLIP
Specific function: Unknown
COG id: COG0604
COG function: function code CR; NADPH:quinone reductase and related Zn-dependent oxidoreductases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily [H]
Homologues:
Organism=Homo sapiens, GI194239674, Length=329, Percent_Identity=27.6595744680851, Blast_Score=128, Evalue=9e-30, Organism=Homo sapiens, GI13236495, Length=329, Percent_Identity=27.6595744680851, Blast_Score=128, Evalue=9e-30, Organism=Homo sapiens, GI194239676, Length=203, Percent_Identity=34.9753694581281, Blast_Score=122, Evalue=6e-28, Organism=Homo sapiens, GI22538446, Length=329, Percent_Identity=30.3951367781155, Blast_Score=118, Evalue=7e-27, Organism=Homo sapiens, GI22538444, Length=329, Percent_Identity=30.3951367781155, Blast_Score=118, Evalue=7e-27, Organism=Homo sapiens, GI18379349, Length=312, Percent_Identity=29.8076923076923, Blast_Score=111, Evalue=9e-25, Organism=Homo sapiens, GI28557745, Length=308, Percent_Identity=30.1948051948052, Blast_Score=96, Evalue=4e-20, Organism=Homo sapiens, GI24308257, Length=239, Percent_Identity=28.8702928870293, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI47519420, Length=244, Percent_Identity=27.8688524590164, Blast_Score=65, Evalue=6e-11, Organism=Escherichia coli, GI1790485, Length=327, Percent_Identity=73.394495412844, Blast_Score=496, Evalue=1e-142, Organism=Caenorhabditis elegans, GI17507255, Length=258, Percent_Identity=32.5581395348837, Blast_Score=103, Evalue=1e-22, Organism=Caenorhabditis elegans, GI17536829, Length=174, Percent_Identity=33.3333333333333, Blast_Score=68, Evalue=6e-12, Organism=Caenorhabditis elegans, GI17562584, Length=324, Percent_Identity=24.3827160493827, Blast_Score=64, Evalue=7e-11, Organism=Saccharomyces cerevisiae, GI6319520, Length=330, Percent_Identity=37.2727272727273, Blast_Score=195, Evalue=8e-51, Organism=Saccharomyces cerevisiae, GI6319621, Length=266, Percent_Identity=28.5714285714286, Blast_Score=81, Evalue=2e-16, Organism=Saccharomyces cerevisiae, GI6323729, Length=253, Percent_Identity=26.8774703557312, Blast_Score=81, Evalue=2e-16, Organism=Saccharomyces cerevisiae, GI6324486, Length=293, Percent_Identity=26.2798634812287, Blast_Score=76, Evalue=6e-15, Organism=Saccharomyces cerevisiae, GI6323961, Length=270, Percent_Identity=25.5555555555556, Blast_Score=74, Evalue=3e-14, Organism=Drosophila melanogaster, GI45550423, Length=304, Percent_Identity=26.9736842105263, Blast_Score=74, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013149 - InterPro: IPR013154 - InterPro: IPR002085 - InterPro: IPR011032 - InterPro: IPR016040 - InterPro: IPR002364 [H]
Pfam domain/function: PF08240 ADH_N; PF00107 ADH_zinc_N [H]
EC number: =1.6.5.5 [H]
Molecular weight: Translated: 34640; Mature: 34508
Theoretical pI: Translated: 6.63; Mature: 6.63
Prosite motif: PS01162 QOR_ZETA_CRYSTAL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKHIQFTTTGGPDVLQYLEFTPSDPAPHEVQVENKAIGINYIDTYVRSGLYPPAHLPSG CCCEEEEEECCCHHHHHHHHCCCCCCCCCEEEECCCEEEHHHHHHHHHCCCCCCCCCCCC LGTEAAGIVSKVGAAVSSVKVGDRVVYAQSALGAYSEVHNVPADKIALLPEQISFEQAAA CCCHHHHHHHHHHHHHHHEECCCEEEEEHHHHHHHHHHHCCCHHHEECCHHHHHHHHHHH SFLKGLTAYYLLRQTHEIKPGEVFLFHAAAGGVGLIACQWAKALGAKLIGTVGSDEKAQL HHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHEECCCCCHHHHH AKAAGAWATINYRTENIAQRVAELTEGEKVGVVYDSVGKSTWEASLDSLKRRGLLVSFGN HHHCCCEEEEEECHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHCCEEEEECC ASGPVTGVNLGILNQKGGIYVTRPSLNVYVANRQELESASQQLFSMITSGAINVDVAQAQ CCCCEEEEEEEEEECCCCEEEECCCEEEEECCHHHHHHHHHHHHHHHHCCCCEEEHHHHC QFPLCDAQRAHETLEGRQTTGSSLLIP CCCCCCHHHHHHHHCCCCCCCCEECCC >Mature Secondary Structure AKHIQFTTTGGPDVLQYLEFTPSDPAPHEVQVENKAIGINYIDTYVRSGLYPPAHLPSG CCEEEEEECCCHHHHHHHHCCCCCCCCCEEEECCCEEEHHHHHHHHHCCCCCCCCCCCC LGTEAAGIVSKVGAAVSSVKVGDRVVYAQSALGAYSEVHNVPADKIALLPEQISFEQAAA CCCHHHHHHHHHHHHHHHEECCCEEEEEHHHHHHHHHHHCCCHHHEECCHHHHHHHHHHH SFLKGLTAYYLLRQTHEIKPGEVFLFHAAAGGVGLIACQWAKALGAKLIGTVGSDEKAQL HHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHEECCCCCHHHHH AKAAGAWATINYRTENIAQRVAELTEGEKVGVVYDSVGKSTWEASLDSLKRRGLLVSFGN HHHCCCEEEEEECHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHCCEEEEECC ASGPVTGVNLGILNQKGGIYVTRPSLNVYVANRQELESASQQLFSMITSGAINVDVAQAQ CCCCEEEEEEEEEECCCCEEEECCCEEEEECCHHHHHHHHHHHHHHHHCCCCEEEHHHHC QFPLCDAQRAHETLEGRQTTGSSLLIP CCCCCCHHHHHHHHCCCCCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8265357; 9278503; 7602590 [H]