Definition Yersinia pseudotuberculosis YPIII chromosome, complete genome.
Accession NC_010465
Length 4,689,441

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The map label for this gene is 170025477

Identifier: 170025477

GI number: 170025477

Start: 3563516

End: 3564847

Strand: Reverse

Name: 170025477

Synonym: YPK_3260

Alternate gene names: NA

Gene position: 3564847-3563516 (Counterclockwise)

Preceding gene: 170025478

Following gene: 170025476

Centisome position: 76.02

GC content: 36.34

Gene sequence:

>1332_bases
ATGACTGTTAGTTATGTCGGGCGAGGAGAGTCACTTTCATGGGTATATGGAGTAGACAATGTGAATATACCAAATTCAGA
TGTGGTCGATTCACCTTTTAATGACTTCACTCAATTTGATAATATGGATTTTTCGGCTAATTATAATTCTATTTTATCGA
GAGAAAATAAATCGCTAATTACGTCATTTATAAGTGAATGTAATGATAAGGTTAAGAGGTTAAGTGAAGATGAAAATTAT
ATTTTAACTCAAAAATATATTTCATCACTGGATGAAATGTGTGAGGAAATAAATAAAAAATTACTTTATTGTCATGATAG
TAAAGTATTAAAAAATGTTTTAGATTCGACGCTTCAAAAGCAAACTGAAATGAGTAAATACATAGTGTTACTGGAAGGTG
TGCCTTATCGCATTGAACCAAGAGATATCGCAGCTGACATTACGAATGAACGAATAAATGGTGCTATAGAGTTATTGAAT
TTTGTTGCCAAGGCTTACCCGAAAATAGCGAAGGAATCCGCTAAGTTGCAGCGATCCCGACCCCATGCCAATTGCAGTGT
TGAGACGTTGAATGACTATTTAGAACAGTTAAAAAAAATATTGTCAGGCAAGAAACTACTCAGTAATAGAAGACAACGCT
CTTCATCAATTCATTTTAAAGACGCATGGGGTGGCGGTGATAAGTCTGGACGAATAAATGCGCAAAAAAACGTAGAGATT
AATAAGAAAATGGAAGGTATCTATATTGGATTCACTCAGCGAACGATAGAGAGTCAGACTGAAAATCAGTCTGTGGTTTT
TAAATCATCAAAACATGAGATGGTAGAAAATAAATTAATCTATTTAGCCTCTTTAGCTAATGAGTTGAGTAAGCTAAATG
ACTCTATTAGTGATGAGAATTTAAAATATTCTATAAATAAAGTGGTTGGTGAAGTCCTTGAGTTGAAATTGAAGAAAATT
CAGAAAATTCAGAAAATGGCGAAAAGTTCGAAATGTAATTTTTCATTTTCTAATCTTAAGAAGGATTTAGCTATGCTGAG
TTCGCTTGCGGTAACTGGCATCGCCGCAGGTGTGATACCTACATTTATCGCCACCGGTATAGTGGCTGCAATAGCGCCTA
TCTTAGCGGCGTTAGGGTGTGCAATATATGCATTTAATCCACAGCTAAAAGAAACAGAAACCAGTAAATTACTGGATGCG
AGCATCAAAGATATCGGGGCGACGTTGGGGAGTGAGCTAAAGGATGAGAAGTTGGGGCGCTTCGAATATCTGCGCCATAA
ATATGCCGCTTATAAGTACCGTAAGGCTGCCAAGCACACATTCGATGGCTGA

Upstream 100 bases:

>100_bases
GTTACTGATAAGTTTATTATTTTTCTGATAGTTAATAAATTCGTGATCAGTCACCTTTAAAAGGTAAATAAAATACAGGC
TGATATTAAAAGGAATATTT

Downstream 100 bases:

>100_bases
TCGGCCTTTGTTGTCATCGCACTTCGCGGTAAACTGTCGGTAAGTTTAGGTTCACCAATCAGGAAGCGTTATGCATTGTC
CGTTTTGTGCCGCTGTGGAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 443; Mature: 442

Protein sequence:

>443_residues
MTVSYVGRGESLSWVYGVDNVNIPNSDVVDSPFNDFTQFDNMDFSANYNSILSRENKSLITSFISECNDKVKRLSEDENY
ILTQKYISSLDEMCEEINKKLLYCHDSKVLKNVLDSTLQKQTEMSKYIVLLEGVPYRIEPRDIAADITNERINGAIELLN
FVAKAYPKIAKESAKLQRSRPHANCSVETLNDYLEQLKKILSGKKLLSNRRQRSSSIHFKDAWGGGDKSGRINAQKNVEI
NKKMEGIYIGFTQRTIESQTENQSVVFKSSKHEMVENKLIYLASLANELSKLNDSISDENLKYSINKVVGEVLELKLKKI
QKIQKMAKSSKCNFSFSNLKKDLAMLSSLAVTGIAAGVIPTFIATGIVAAIAPILAALGCAIYAFNPQLKETETSKLLDA
SIKDIGATLGSELKDEKLGRFEYLRHKYAAYKYRKAAKHTFDG

Sequences:

>Translated_443_residues
MTVSYVGRGESLSWVYGVDNVNIPNSDVVDSPFNDFTQFDNMDFSANYNSILSRENKSLITSFISECNDKVKRLSEDENY
ILTQKYISSLDEMCEEINKKLLYCHDSKVLKNVLDSTLQKQTEMSKYIVLLEGVPYRIEPRDIAADITNERINGAIELLN
FVAKAYPKIAKESAKLQRSRPHANCSVETLNDYLEQLKKILSGKKLLSNRRQRSSSIHFKDAWGGGDKSGRINAQKNVEI
NKKMEGIYIGFTQRTIESQTENQSVVFKSSKHEMVENKLIYLASLANELSKLNDSISDENLKYSINKVVGEVLELKLKKI
QKIQKMAKSSKCNFSFSNLKKDLAMLSSLAVTGIAAGVIPTFIATGIVAAIAPILAALGCAIYAFNPQLKETETSKLLDA
SIKDIGATLGSELKDEKLGRFEYLRHKYAAYKYRKAAKHTFDG
>Mature_442_residues
TVSYVGRGESLSWVYGVDNVNIPNSDVVDSPFNDFTQFDNMDFSANYNSILSRENKSLITSFISECNDKVKRLSEDENYI
LTQKYISSLDEMCEEINKKLLYCHDSKVLKNVLDSTLQKQTEMSKYIVLLEGVPYRIEPRDIAADITNERINGAIELLNF
VAKAYPKIAKESAKLQRSRPHANCSVETLNDYLEQLKKILSGKKLLSNRRQRSSSIHFKDAWGGGDKSGRINAQKNVEIN
KKMEGIYIGFTQRTIESQTENQSVVFKSSKHEMVENKLIYLASLANELSKLNDSISDENLKYSINKVVGEVLELKLKKIQ
KIQKMAKSSKCNFSFSNLKKDLAMLSSLAVTGIAAGVIPTFIATGIVAAIAPILAALGCAIYAFNPQLKETETSKLLDAS
IKDIGATLGSELKDEKLGRFEYLRHKYAAYKYRKAAKHTFDG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49733; Mature: 49602

Theoretical pI: Translated: 9.20; Mature: 9.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVSYVGRGESLSWVYGVDNVNIPNSDVVDSPFNDFTQFDNMDFSANYNSILSRENKSLI
CEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHCHHHHH
TSFISECNDKVKRLSEDENYILTQKYISSLDEMCEEINKKLLYCHDSKVLKNVLDSTLQK
HHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHH
QTEMSKYIVLLEGVPYRIEPRDIAADITNERINGAIELLNFVAKAYPKIAKESAKLQRSR
HHHHHHEEEEEECCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PHANCSVETLNDYLEQLKKILSGKKLLSNRRQRSSSIHFKDAWGGGDKSGRINAQKNVEI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCEE
NKKMEGIYIGFTQRTIESQTENQSVVFKSSKHEMVENKLIYLASLANELSKLNDSISDEN
CCCCCEEEEEEHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
LKYSINKVVGEVLELKLKKIQKIQKMAKSSKCNFSFSNLKKDLAMLSSLAVTGIAAGVIP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
TFIATGIVAAIAPILAALGCAIYAFNPQLKETETSKLLDASIKDIGATLGSELKDEKLGR
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FEYLRHKYAAYKYRKAAKHTFDG
HHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TVSYVGRGESLSWVYGVDNVNIPNSDVVDSPFNDFTQFDNMDFSANYNSILSRENKSLI
EEEEECCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHCHHHHH
TSFISECNDKVKRLSEDENYILTQKYISSLDEMCEEINKKLLYCHDSKVLKNVLDSTLQK
HHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHH
QTEMSKYIVLLEGVPYRIEPRDIAADITNERINGAIELLNFVAKAYPKIAKESAKLQRSR
HHHHHHEEEEEECCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PHANCSVETLNDYLEQLKKILSGKKLLSNRRQRSSSIHFKDAWGGGDKSGRINAQKNVEI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCEE
NKKMEGIYIGFTQRTIESQTENQSVVFKSSKHEMVENKLIYLASLANELSKLNDSISDEN
CCCCCEEEEEEHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
LKYSINKVVGEVLELKLKKIQKIQKMAKSSKCNFSFSNLKKDLAMLSSLAVTGIAAGVIP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
TFIATGIVAAIAPILAALGCAIYAFNPQLKETETSKLLDASIKDIGATLGSELKDEKLGR
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FEYLRHKYAAYKYRKAAKHTFDG
HHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA