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The map label for this gene is nrdR [H]

Identifier: 170025476

GI number: 170025476

Start: 3562996

End: 3563445

Strand: Reverse

Name: nrdR [H]

Synonym: YPK_3259

Alternate gene names: 170025476

Gene position: 3563445-3562996 (Counterclockwise)

Preceding gene: 170025477

Following gene: 170025475

Centisome position: 75.99

GC content: 48.0

Gene sequence:

>450_bases
ATGCATTGTCCGTTTTGTGCCGCTGTGGATACTAAAGTGATTGACTCCCGTCTGGTGAGTGATGGCTCACAAGTCCGCCG
CCGCCGCCAGTGTTTAGATTGTAATGAGCGTTTTACCACTTTTGAAGTGGCTGAGCTGGTGTTACCACGGGTCATAAAAA
GTGACGAGGTACGCGAACCGTTCAATGAAGAGAAATTACGACGCGGTATGTTGAAAGCGTTAGAAAAGCGGCCAGTTAGC
TCAGATGATGTTGAAACAGCGATAAGCCACATAAAATCTCAATTACGCGCCACCGGTGAGCGGGAAGTGCCGACCAAAAT
GGTGGGTAATTTAGTGATGGAAGCGCTGAAACGTTTGGATAAAGTCGCTTATATCCGCTTTGCCTCGGTTTATCGCAGTT
TCGAAGATGTCCGCGAATTTGGCGAAGAAATTGCGCGCTTGCAGGATTAA

Upstream 100 bases:

>100_bases
AAGGCTGCCAAGCACACATTCGATGGCTGATCGGCCTTTGTTGTCATCGCACTTCGCGGTAAACTGTCGGTAAGTTTAGG
TTCACCAATCAGGAAGCGTT

Downstream 100 bases:

>100_bases
TCGGCACGTGGCTATTTTTTATTTGAGGCGGTGTTTTGACGTTTTAGCTCTAGGTCTATCTATGTCTTAACCTCAAATTA
CGTTCTAGTCTCAGATTACC

Product: transcriptional regulator NrdR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 149; Mature: 149

Protein sequence:

>149_residues
MHCPFCAAVDTKVIDSRLVSDGSQVRRRRQCLDCNERFTTFEVAELVLPRVIKSDEVREPFNEEKLRRGMLKALEKRPVS
SDDVETAISHIKSQLRATGEREVPTKMVGNLVMEALKRLDKVAYIRFASVYRSFEDVREFGEEIARLQD

Sequences:

>Translated_149_residues
MHCPFCAAVDTKVIDSRLVSDGSQVRRRRQCLDCNERFTTFEVAELVLPRVIKSDEVREPFNEEKLRRGMLKALEKRPVS
SDDVETAISHIKSQLRATGEREVPTKMVGNLVMEALKRLDKVAYIRFASVYRSFEDVREFGEEIARLQD
>Mature_149_residues
MHCPFCAAVDTKVIDSRLVSDGSQVRRRRQCLDCNERFTTFEVAELVLPRVIKSDEVREPFNEEKLRRGMLKALEKRPVS
SDDVETAISHIKSQLRATGEREVPTKMVGNLVMEALKRLDKVAYIRFASVYRSFEDVREFGEEIARLQD

Specific function: Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes [H]

COG id: COG1327

COG function: function code K; Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ATP-cone domain [H]

Homologues:

Organism=Escherichia coli, GI1786615, Length=149, Percent_Identity=86.5771812080537, Blast_Score=271, Evalue=1e-74,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005144
- InterPro:   IPR003796 [H]

Pfam domain/function: PF03477 ATP-cone [H]

EC number: NA

Molecular weight: Translated: 17205; Mature: 17205

Theoretical pI: Translated: 7.94; Mature: 7.94

Prosite motif: PS51161 ATP_CONE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHCPFCAAVDTKVIDSRLVSDGSQVRRRRQCLDCNERFTTFEVAELVLPRVIKSDEVREP
CCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCHHHCCC
FNEEKLRRGMLKALEKRPVSSDDVETAISHIKSQLRATGEREVPTKMVGNLVMEALKRLD
CCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
KVAYIRFASVYRSFEDVREFGEEIARLQD
HHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MHCPFCAAVDTKVIDSRLVSDGSQVRRRRQCLDCNERFTTFEVAELVLPRVIKSDEVREP
CCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCHHHCCC
FNEEKLRRGMLKALEKRPVSSDDVETAISHIKSQLRATGEREVPTKMVGNLVMEALKRLD
CCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
KVAYIRFASVYRSFEDVREFGEEIARLQD
HHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA