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The map label for this gene is yfjY [H]

Identifier: 170025352

GI number: 170025352

Start: 3426097

End: 3426567

Strand: Reverse

Name: yfjY [H]

Synonym: YPK_3133

Alternate gene names: 170025352

Gene position: 3426567-3426097 (Counterclockwise)

Preceding gene: 170025353

Following gene: 170025351

Centisome position: 73.07

GC content: 52.02

Gene sequence:

>471_bases
ATGTCTGCACTTCATCTATCTCCGGTATTCCCTGAAAATGAGCAGCGCGTTATCCGGCGAGCCCTGCGCCTGCTGGAGAA
ATATCAGCGCCAGCCGGGTGAACAGTTTACTGCCACCAGCTTTGCTAAAAGCTGGGTGCAATTACAGTTGGCTAGCCAAG
AGCGGGAGGTCTTTCTCGTGATGTACCTTGATAACCAGCATTGCCTGTTGGGGCACGAAGCGTTGTTTACGGGTTCCATC
AGCCATACAGAAGTACATCCCCGTGAGCTGGTGAAAGCGGCTCTGCGCCACAACGCCGCTGCAGTGATTCTGGCGCATAA
CCATCCGTCAGGTACGACAGAAATCAGCCAGCAGGACAAACATATTACGCAGCGGATCGTAAAAGCGTTGGCGTTGGTCG
AAGTGCGAGTGCTGGATCATCTTGTAGTTGGGAATGAAGTGGTTTCTTTTGCTGAACAGGGTTTGCTTTAA

Upstream 100 bases:

>100_bases
GCCGAGAATATGCTGCAGTTTGCCTCATGAATCTTTTTACCCTGACACCCTTCAAGCCCTGTCGATAAACCGGTGGGGTT
TTATATTTTAAGGAACGGAT

Downstream 100 bases:

>100_bases
ACGGAGGTATCCATGTCATTAACACTATCCCATGAATGGGGGCTAAAAAGCGATATCACCCCACGCTTTGGCGCAAGATT
GGTGCAGGAAGGCAATCGCC

Product: DNA repair protein RadC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 156; Mature: 155

Protein sequence:

>156_residues
MSALHLSPVFPENEQRVIRRALRLLEKYQRQPGEQFTATSFAKSWVQLQLASQEREVFLVMYLDNQHCLLGHEALFTGSI
SHTEVHPRELVKAALRHNAAAVILAHNHPSGTTEISQQDKHITQRIVKALALVEVRVLDHLVVGNEVVSFAEQGLL

Sequences:

>Translated_156_residues
MSALHLSPVFPENEQRVIRRALRLLEKYQRQPGEQFTATSFAKSWVQLQLASQEREVFLVMYLDNQHCLLGHEALFTGSI
SHTEVHPRELVKAALRHNAAAVILAHNHPSGTTEISQQDKHITQRIVKALALVEVRVLDHLVVGNEVVSFAEQGLL
>Mature_155_residues
SALHLSPVFPENEQRVIRRALRLLEKYQRQPGEQFTATSFAKSWVQLQLASQEREVFLVMYLDNQHCLLGHEALFTGSIS
HTEVHPRELVKAALRHNAAAVILAHNHPSGTTEISQQDKHITQRIVKALALVEVRVLDHLVVGNEVVSFAEQGLL

Specific function: Unknown

COG id: COG2003

COG function: function code L; DNA repair proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0758 family [H]

Homologues:

Organism=Escherichia coli, GI1788997, Length=151, Percent_Identity=58.2781456953642, Blast_Score=179, Evalue=5e-47,
Organism=Escherichia coli, GI2367100, Length=144, Percent_Identity=58.3333333333333, Blast_Score=169, Evalue=6e-44,
Organism=Escherichia coli, GI1788312, Length=145, Percent_Identity=55.8620689655172, Blast_Score=165, Evalue=1e-42,
Organism=Escherichia coli, GI87082300, Length=114, Percent_Identity=51.7543859649123, Blast_Score=135, Evalue=1e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001405
- InterPro:   IPR020891 [H]

Pfam domain/function: PF04002 DUF2466 [H]

EC number: NA

Molecular weight: Translated: 17599; Mature: 17468

Theoretical pI: Translated: 7.39; Mature: 7.39

Prosite motif: PS01302 RADC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSALHLSPVFPENEQRVIRRALRLLEKYQRQPGEQFTATSFAKSWVQLQLASQEREVFLV
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCEEEEE
MYLDNQHCLLGHEALFTGSISHTEVHPRELVKAALRHNAAAVILAHNHPSGTTEISQQDK
EEECCCCEEECCHHHEECCCCCCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHH
HITQRIVKALALVEVRVLDHLVVGNEVVSFAEQGLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SALHLSPVFPENEQRVIRRALRLLEKYQRQPGEQFTATSFAKSWVQLQLASQEREVFLV
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCEEEEE
MYLDNQHCLLGHEALFTGSISHTEVHPRELVKAALRHNAAAVILAHNHPSGTTEISQQDK
EEECCCCEEECCHHHEECCCCCCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHH
HITQRIVKALALVEVRVLDHLVVGNEVVSFAEQGLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]