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The map label for this gene is yafZ [H]

Identifier: 170025353

GI number: 170025353

Start: 3426638

End: 3427459

Strand: Reverse

Name: yafZ [H]

Synonym: YPK_3134

Alternate gene names: 170025353

Gene position: 3427459-3426638 (Counterclockwise)

Preceding gene: 170025354

Following gene: 170025352

Centisome position: 73.09

GC content: 52.92

Gene sequence:

>822_bases
ATGACCCGATTAGCCAGCCGATTTGGTGCAGTGAACCTAGTGTGCCGTGACCGCCCGTTAACCCGCGACGAATTGGCACA
TTATGTACCGAGTGTTTTCAGCGAAGAAAAGCATGAATCCCGCAGCGACCGATACACCTACATCCCGACCATAACCCTGC
TCGATAACCTGCAGCGTGAAGGCTTCCAGCCGTTCTTTGCCTGCCAGACCCGTGTGCGGGACCAGAGCAAGCGAGAGCAC
ACCAAACACATGCTGCGCCTGCGTCGCGAAGGCCAAATCACTGGCAAACAGGTGCCAGAAATCATCTTGCTTAACAGCCA
TGATGGTTCAAGCTCATACCAGATGCTGCCGGGTTTATTTAGATCGGTTTGTCAAAATGGGCTGATTTGCGGTGAGAGTT
TTGGTGAGGTGCGCGTGCCCCATAAAGGCAACGTGGTGGAGAAAGTCATTGAAGGAGCTTACGAAGTACTGGGAATTTTT
GACCGTGTGGAAGAGAAGCGCGATGCCATGCAGTCGCTGATGTTACCTCCACCAGCACAGCAGGCGATGGCAAAAGCGGC
ATTAACGTATCGTTTTGGTGAAGAGCATCAGCCGGTAAGTGAATCACAAATCCTTTCCCCGCGCCGCTGGCAGGATGAGA
GTAACGACCTGTGGACCACTTATCAGCGGATTCAGGAAAACCTGATTAAAGGTGGGCTGTCGGGGCGAACGACCAAAGGT
AAACGTGCCCAAACCCGTGCTGTAAAAGGTATTGACGGCGATGTGAAGCTTAACCGCGCCCTGTGGGTTATGGCCGAGAA
TATGCTGCAGTTTGCCTCATGA

Upstream 100 bases:

>100_bases
AACACCCGGTAGTCACGCTACTCTCAGCTTACCCAGCATAACCATAGCGCCCTGCTCATTCGAGCGGGGCGTTTTCTTTT
GTTTAATAAGGAAAAACACG

Downstream 100 bases:

>100_bases
ATCTTTTTACCCTGACACCCTTCAAGCCCTGTCGATAAACCGGTGGGGTTTTATATTTTAAGGAACGGATATGTCTGCAC
TTCATCTATCTCCGGTATTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 273; Mature: 272

Protein sequence:

>273_residues
MTRLASRFGAVNLVCRDRPLTRDELAHYVPSVFSEEKHESRSDRYTYIPTITLLDNLQREGFQPFFACQTRVRDQSKREH
TKHMLRLRREGQITGKQVPEIILLNSHDGSSSYQMLPGLFRSVCQNGLICGESFGEVRVPHKGNVVEKVIEGAYEVLGIF
DRVEEKRDAMQSLMLPPPAQQAMAKAALTYRFGEEHQPVSESQILSPRRWQDESNDLWTTYQRIQENLIKGGLSGRTTKG
KRAQTRAVKGIDGDVKLNRALWVMAENMLQFAS

Sequences:

>Translated_273_residues
MTRLASRFGAVNLVCRDRPLTRDELAHYVPSVFSEEKHESRSDRYTYIPTITLLDNLQREGFQPFFACQTRVRDQSKREH
TKHMLRLRREGQITGKQVPEIILLNSHDGSSSYQMLPGLFRSVCQNGLICGESFGEVRVPHKGNVVEKVIEGAYEVLGIF
DRVEEKRDAMQSLMLPPPAQQAMAKAALTYRFGEEHQPVSESQILSPRRWQDESNDLWTTYQRIQENLIKGGLSGRTTKG
KRAQTRAVKGIDGDVKLNRALWVMAENMLQFAS
>Mature_272_residues
TRLASRFGAVNLVCRDRPLTRDELAHYVPSVFSEEKHESRSDRYTYIPTITLLDNLQREGFQPFFACQTRVRDQSKREHT
KHMLRLRREGQITGKQVPEIILLNSHDGSSSYQMLPGLFRSVCQNGLICGESFGEVRVPHKGNVVEKVIEGAYEVLGIFD
RVEEKRDAMQSLMLPPPAQQAMAKAALTYRFGEEHQPVSESQILSPRRWQDESNDLWTTYQRIQENLIKGGLSGRTTKGK
RAQTRAVKGIDGDVKLNRALWVMAENMLQFAS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0380 family [H]

Homologues:

Organism=Escherichia coli, GI1788987, Length=269, Percent_Identity=86.9888475836431, Blast_Score=500, Evalue=1e-143,
Organism=Escherichia coli, GI87081705, Length=269, Percent_Identity=88.1040892193308, Blast_Score=484, Evalue=1e-138,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009276 [H]

Pfam domain/function: PF06067 DUF932 [H]

EC number: NA

Molecular weight: Translated: 31194; Mature: 31063

Theoretical pI: Translated: 9.38; Mature: 9.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRLASRFGAVNLVCRDRPLTRDELAHYVPSVFSEEKHESRSDRYTYIPTITLLDNLQRE
CCHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHH
GFQPFFACQTRVRDQSKREHTKHMLRLRREGQITGKQVPEIILLNSHDGSSSYQMLPGLF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHH
RSVCQNGLICGESFGEVRVPHKGNVVEKVIEGAYEVLGIFDRVEEKRDAMQSLMLPPPAQ
HHHHHCCCEECCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
QAMAKAALTYRFGEEHQPVSESQILSPRRWQDESNDLWTTYQRIQENLIKGGLSGRTTKG
HHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC
KRAQTRAVKGIDGDVKLNRALWVMAENMLQFAS
CHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TRLASRFGAVNLVCRDRPLTRDELAHYVPSVFSEEKHESRSDRYTYIPTITLLDNLQRE
CHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHH
GFQPFFACQTRVRDQSKREHTKHMLRLRREGQITGKQVPEIILLNSHDGSSSYQMLPGLF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHH
RSVCQNGLICGESFGEVRVPHKGNVVEKVIEGAYEVLGIFDRVEEKRDAMQSLMLPPPAQ
HHHHHCCCEECCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
QAMAKAALTYRFGEEHQPVSESQILSPRRWQDESNDLWTTYQRIQENLIKGGLSGRTTKG
HHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC
KRAQTRAVKGIDGDVKLNRALWVMAENMLQFAS
CHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]