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The map label for this gene is yagB [H]

Identifier: 170025351

GI number: 170025351

Start: 3425755

End: 3426084

Strand: Reverse

Name: yagB [H]

Synonym: YPK_3132

Alternate gene names: 170025351

Gene position: 3426084-3425755 (Counterclockwise)

Preceding gene: 170025352

Following gene: 170025350

Centisome position: 73.06

GC content: 52.12

Gene sequence:

>330_bases
ATGTCATTAACACTATCCCATGAATGGGGGCTAAAAAGCGATATCACCCCACGCTTTGGCGCAAGATTGGTGCAGGAAGG
CAATCGCCTGCACTTTCGGGCTGACCATGCGGGTTTTAACGGTGCATTCAGTGAGGATGAGGCGCTGCGGCTTGACCAAG
CGTTTCCACTGATGCTCAAACAGCTTGAACTTAAGCTGCTATCCGGTGAGCTCAATCCTCGTCGTCAGCATTGCGTTACG
TTGAACCACAATGGCCTGACCTGCGAAGCTGACACCCTCGGCTCTCACGGGTATGTCTATATCACTATTTACCCGGCAAG
CCCGGAATAA

Upstream 100 bases:

>100_bases
AGCGTTGGCGTTGGTCGAAGTGCGAGTGCTGGATCATCTTGTAGTTGGGAATGAAGTGGTTTCTTTTGCTGAACAGGGTT
TGCTTTAAACGGAGGTATCC

Downstream 100 bases:

>100_bases
CCCTTACCGCCACCTTCGCTTTACCCCTTATGCAACATCGTTAATCTGAAGAGAATTCAACCAATGCAAACCTTACCCGT
AAACCCGAAACGGGCGGCAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 109; Mature: 108

Protein sequence:

>109_residues
MSLTLSHEWGLKSDITPRFGARLVQEGNRLHFRADHAGFNGAFSEDEALRLDQAFPLMLKQLELKLLSGELNPRRQHCVT
LNHNGLTCEADTLGSHGYVYITIYPASPE

Sequences:

>Translated_109_residues
MSLTLSHEWGLKSDITPRFGARLVQEGNRLHFRADHAGFNGAFSEDEALRLDQAFPLMLKQLELKLLSGELNPRRQHCVT
LNHNGLTCEADTLGSHGYVYITIYPASPE
>Mature_108_residues
SLTLSHEWGLKSDITPRFGARLVQEGNRLHFRADHAGFNGAFSEDEALRLDQAFPLMLKQLELKLLSGELNPRRQHCVTL
NHNGLTCEADTLGSHGYVYITIYPASPE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yafW, yeeU and yfjZ [H]

Homologues:

Organism=Escherichia coli, GI1788314, Length=101, Percent_Identity=66.3366336633663, Blast_Score=137, Evalue=1e-34,
Organism=Escherichia coli, GI1788998, Length=98, Percent_Identity=63.265306122449, Blast_Score=136, Evalue=3e-34,
Organism=Escherichia coli, GI1786440, Length=97, Percent_Identity=61.8556701030928, Blast_Score=125, Evalue=6e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009320 [H]

Pfam domain/function: PF06154 YagB_YeeU_YfjZ [H]

EC number: NA

Molecular weight: Translated: 12235; Mature: 12104

Theoretical pI: Translated: 6.50; Mature: 6.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLTLSHEWGLKSDITPRFGARLVQEGNRLHFRADHAGFNGAFSEDEALRLDQAFPLMLK
CEEECCCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCEEECCCHHHHHHH
QLELKLLSGELNPRRQHCVTLNHNGLTCEADTLGSHGYVYITIYPASPE
HHHHHEECCCCCCCCCEEEEECCCCEEEECCCCCCCCEEEEEEEECCCC
>Mature Secondary Structure 
SLTLSHEWGLKSDITPRFGARLVQEGNRLHFRADHAGFNGAFSEDEALRLDQAFPLMLK
EEECCCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCEEECCCHHHHHHH
QLELKLLSGELNPRRQHCVTLNHNGLTCEADTLGSHGYVYITIYPASPE
HHHHHEECCCCCCCCCEEEEECCCCEEEECCCCCCCCEEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8113168; 9278503 [H]