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The map label for this gene is ycbK [H]

Identifier: 170024878

GI number: 170024878

Start: 2914550

End: 2915098

Strand: Reverse

Name: ycbK [H]

Synonym: YPK_2653

Alternate gene names: 170024878

Gene position: 2915098-2914550 (Counterclockwise)

Preceding gene: 170024879

Following gene: 170024877

Centisome position: 62.16

GC content: 46.63

Gene sequence:

>549_bases
ATGGATAAAATTGATAATAATCGCCGCAAGTGGCTAACGTTGGGCGGAGTTGCGTTGGGGATGTCACTGCTTCCAGGGCC
AGTATTCGCCACTCTTTCTACGCCACGCCCACGGATTTTGACCCTGAATAACCTTAATACAGGTGAGTCCATAAAAGCAG
AGTTCTTTGATGGACGGAATTATAACAAAGATGAACTTTCCCGCTTAAACCATATTTTCCGCGATTACCGAGCCAATAAA
GTCAAAAAAATTGATCCACGCCTGTTCGATCAGCTGTATCGCCTACAAGTTCTCCTCGAAACCACTAAACCGGTGCAGCT
TATTTCCGGCTACCGCTCCCTCGGCACCAATAATGAACTGCGTGAACATAGCCGTGGGGTGGCCAAACAGAGCTACCATA
CCAAAGGTCAAGCGATGGACTTTCATATTGAAGGTATCCAATTGAGTTATATCCGCAAAGCGGCATTAAAAATGCGCGCA
GGTGGTGTAGGATATTACCCTCGCAGTAATTTTGTGCATATTGATACCGGGCCAACACGGGCTTGGTAA

Upstream 100 bases:

>100_bases
CGGTTAAGGTTCGGAGCGGCACATATTCGAAGCGGCACATCATATATATAGTGCCTATAGTGCTTACTTTTGACATTCTT
GCCAGGTATTAACAGAGATC

Downstream 100 bases:

>100_bases
AACAAATTTTTTAGCCAGTGCCTACGCTCCAGTTGGTAGTCACATTGGGGTTGGAGCTTTATGAAATATCAAATTATTCC
AGTCACGGCGTTTAGCCAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 182; Mature: 182

Protein sequence:

>182_residues
MDKIDNNRRKWLTLGGVALGMSLLPGPVFATLSTPRPRILTLNNLNTGESIKAEFFDGRNYNKDELSRLNHIFRDYRANK
VKKIDPRLFDQLYRLQVLLETTKPVQLISGYRSLGTNNELREHSRGVAKQSYHTKGQAMDFHIEGIQLSYIRKAALKMRA
GGVGYYPRSNFVHIDTGPTRAW

Sequences:

>Translated_182_residues
MDKIDNNRRKWLTLGGVALGMSLLPGPVFATLSTPRPRILTLNNLNTGESIKAEFFDGRNYNKDELSRLNHIFRDYRANK
VKKIDPRLFDQLYRLQVLLETTKPVQLISGYRSLGTNNELREHSRGVAKQSYHTKGQAMDFHIEGIQLSYIRKAALKMRA
GGVGYYPRSNFVHIDTGPTRAW
>Mature_182_residues
MDKIDNNRRKWLTLGGVALGMSLLPGPVFATLSTPRPRILTLNNLNTGESIKAEFFDGRNYNKDELSRLNHIFRDYRANK
VKKIDPRLFDQLYRLQVLLETTKPVQLISGYRSLGTNNELREHSRGVAKQSYHTKGQAMDFHIEGIQLSYIRKAALKMRA
GGVGYYPRSNFVHIDTGPTRAW

Specific function: Unknown

COG id: COG3108

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1666 [H]

Homologues:

Organism=Escherichia coli, GI1787157, Length=182, Percent_Identity=81.8681318681319, Blast_Score=308, Evalue=2e-85,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010275
- InterPro:   IPR009045
- InterPro:   IPR006311 [H]

Pfam domain/function: PF05951 Peptidase_M15_2 [H]

EC number: NA

Molecular weight: Translated: 20835; Mature: 20835

Theoretical pI: Translated: 10.70; Mature: 10.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKIDNNRRKWLTLGGVALGMSLLPGPVFATLSTPRPRILTLNNLNTGESIKAEFFDGRN
CCCCCCCCCEEEEECHHHHHHHHCCCCEEEEECCCCCEEEEECCCCCCCCEEEEEECCCC
YNKDELSRLNHIFRDYRANKVKKIDPRLFDQLYRLQVLLETTKPVQLISGYRSLGTNNEL
CCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHH
REHSRGVAKQSYHTKGQAMDFHIEGIQLSYIRKAALKMRAGGVGYYPRSNFVHIDTGPTR
HHHHCCHHHHHHCCCCCEEEEEECCEEHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCC
AW
CC
>Mature Secondary Structure
MDKIDNNRRKWLTLGGVALGMSLLPGPVFATLSTPRPRILTLNNLNTGESIKAEFFDGRN
CCCCCCCCCEEEEECHHHHHHHHCCCCEEEEECCCCCEEEEECCCCCCCCEEEEEECCCC
YNKDELSRLNHIFRDYRANKVKKIDPRLFDQLYRLQVLLETTKPVQLISGYRSLGTNNEL
CCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHH
REHSRGVAKQSYHTKGQAMDFHIEGIQLSYIRKAALKMRAGGVGYYPRSNFVHIDTGPTR
HHHHCCHHHHHHCCCCCEEEEEECCEEHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCC
AW
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]