Click here to switch to the map view.

The map label for this gene is 170024811

Identifier: 170024811

GI number: 170024811

Start: 2840999

End: 2842084

Strand: Reverse

Name: 170024811

Synonym: YPK_2586

Alternate gene names: NA

Gene position: 2842084-2840999 (Counterclockwise)

Preceding gene: 170024812

Following gene: 170024810

Centisome position: 60.61

GC content: 58.56

Gene sequence:

>1086_bases
ATGGGAAGAGAATCATCAGTCCCGCCTTCCCGGCTAATCACCCGGCTTAAGCGCGATATCGGCCAGATCAATTTTTACCG
TTTCTGTCAGTTGCTGGAGCAACAACCGGGAACCTTGCCGCTCGGCAGTACCAACAGCCCGGCGGATGATCCGGTGCGTT
TTCGTCCGCATCCCGGCATGGGTTTTCCGGTCAGTGAACTGAAGGCGCTGGAAAACGACCCGCTGCATCCGGAAGCCCCG
TTGACCGCGCGCACCACCTTTATGGGGTTGTACGGGGTGGATTCGCCTTTGCCGACGGCCTATATCGACGATATCACCCA
GCAGCGCGAAGGGCATGAGGCGCTGGAAGGGTTCCTCGATATTTTCAACCACCGTTTTATGACGCAGTTTTATCGCATCT
GGCGCAAATATTCCTATCCGGCCACTTTTGAGTCGGGCGGCACAGACAATACCTCTCAGAGCCTGTTGGGGCTGATAGGC
ATGGGTATTCCTGGCTCACAGCAGCATTTTGCCACCCCGACATCGCGCTTTCTGGCCTTGCTGGGGGTGATGCGACAACC
GGGGCGCACTGCCGAAGGGGTACAGGCGCTGGTCCGGCTGCTGGCCCCGTTTACCGAGGCGGATGTCACGCCCCATTGCC
TGCGCACGGTACGCCTGACTTCTCCGATGGCGTTTGCCGATGAAGGGGCCAACTGGCTGGACGGCTACACCGTGCTGGGT
GATGAGGCCATTGATGCCAACAGTCAGTTGCTGATTTCGCTGCGCACGGCAGACCGCGACGAGGCCGCTAACTGGTTACC
GGATGGCCCGCTGTATACCGATTTTCTGGTGCTGTTGCGGGTCTATCTGGGCTGGCGTTACCGGGCCTGTATCCAACTGA
CGGTCGCCACCCGGTTGCTGCCGGCGTTGGTGTTGGATGAGACACCGATAAGGCTGGGATTAACCGGCGTGCTGGGGCTG
GATGACGCGACGCGGTCAGACGATATACCTGAATATTTTACCGTGGCGCTGGGCCACTACCGTGGGCTGGCTCCACAGCA
ACATCAAGAAGGAAACCGACGTGTTAACTACCGTTTGGAAAAATAA

Upstream 100 bases:

>100_bases
TGTTTGGGGAAATGCTCAGTCGCTTCTTTGCCCTGTATACCGATATTCACCTGTTTAATCGTCTGACTCTGATACTGCAA
CCGACAGGAGAACGTTTGGA

Downstream 100 bases:

>100_bases
AACCTGTACTTCGAAACATAAAAGCTGGGCCGCCTGGAAAAATAAAATCTGCATCCCCGCACTGGTCTTGTTGCTCAGTG
GCTGCGGGCTGACGCAAGCC

Product: type VI secretion protein

Products: NA

Alternate protein names: Type VI Secretion Protein Family; Conserved Protein; Type VI Secretion System Protein ImpH; Cytoplasmic Protein; Type VI Secretion System Protein; Type VI Secretion Protein VasG; Type VI Secretion System Protein EvpG; Quinoprotein Dehydrogenase; Protein ImpH; Cytoplasmic Protein SciB; ImpA Domain-Containing Protein

Number of amino acids: Translated: 361; Mature: 360

Protein sequence:

>361_residues
MGRESSVPPSRLITRLKRDIGQINFYRFCQLLEQQPGTLPLGSTNSPADDPVRFRPHPGMGFPVSELKALENDPLHPEAP
LTARTTFMGLYGVDSPLPTAYIDDITQQREGHEALEGFLDIFNHRFMTQFYRIWRKYSYPATFESGGTDNTSQSLLGLIG
MGIPGSQQHFATPTSRFLALLGVMRQPGRTAEGVQALVRLLAPFTEADVTPHCLRTVRLTSPMAFADEGANWLDGYTVLG
DEAIDANSQLLISLRTADRDEAANWLPDGPLYTDFLVLLRVYLGWRYRACIQLTVATRLLPALVLDETPIRLGLTGVLGL
DDATRSDDIPEYFTVALGHYRGLAPQQHQEGNRRVNYRLEK

Sequences:

>Translated_361_residues
MGRESSVPPSRLITRLKRDIGQINFYRFCQLLEQQPGTLPLGSTNSPADDPVRFRPHPGMGFPVSELKALENDPLHPEAP
LTARTTFMGLYGVDSPLPTAYIDDITQQREGHEALEGFLDIFNHRFMTQFYRIWRKYSYPATFESGGTDNTSQSLLGLIG
MGIPGSQQHFATPTSRFLALLGVMRQPGRTAEGVQALVRLLAPFTEADVTPHCLRTVRLTSPMAFADEGANWLDGYTVLG
DEAIDANSQLLISLRTADRDEAANWLPDGPLYTDFLVLLRVYLGWRYRACIQLTVATRLLPALVLDETPIRLGLTGVLGL
DDATRSDDIPEYFTVALGHYRGLAPQQHQEGNRRVNYRLEK
>Mature_360_residues
GRESSVPPSRLITRLKRDIGQINFYRFCQLLEQQPGTLPLGSTNSPADDPVRFRPHPGMGFPVSELKALENDPLHPEAPL
TARTTFMGLYGVDSPLPTAYIDDITQQREGHEALEGFLDIFNHRFMTQFYRIWRKYSYPATFESGGTDNTSQSLLGLIGM
GIPGSQQHFATPTSRFLALLGVMRQPGRTAEGVQALVRLLAPFTEADVTPHCLRTVRLTSPMAFADEGANWLDGYTVLGD
EAIDANSQLLISLRTADRDEAANWLPDGPLYTDFLVLLRVYLGWRYRACIQLTVATRLLPALVLDETPIRLGLTGVLGLD
DATRSDDIPEYFTVALGHYRGLAPQQHQEGNRRVNYRLEK

Specific function: Unknown

COG id: COG3520

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40318; Mature: 40187

Theoretical pI: Translated: 5.88; Mature: 5.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRESSVPPSRLITRLKRDIGQINFYRFCQLLEQQPGTLPLGSTNSPADDPVRFRPHPGM
CCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCEECCCCCC
GFPVSELKALENDPLHPEAPLTARTTFMGLYGVDSPLPTAYIDDITQQREGHEALEGFLD
CCCHHHHHHHCCCCCCCCCCCCHHHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH
IFNHRFMTQFYRIWRKYSYPATFESGGTDNTSQSLLGLIGMGIPGSQQHFATPTSRFLAL
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH
LGVMRQPGRTAEGVQALVRLLAPFTEADVTPHCLRTVRLTSPMAFADEGANWLDGYTVLG
HHHHHCCCCCHHHHHHHHHHHCCHHHCCCCHHHHHHHHHCCCCHHHCCCCCHHCCEEEEC
DEAIDANSQLLISLRTADRDEAANWLPDGPLYTDFLVLLRVYLGWRYRACIQLTVATRLL
CCCCCCCCEEEEEEECCCCHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
PALVLDETPIRLGLTGVLGLDDATRSDDIPEYFTVALGHYRGLAPQQHQEGNRRVNYRLE
HHHHHCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHCCCCEEEEEEC
K
C
>Mature Secondary Structure 
GRESSVPPSRLITRLKRDIGQINFYRFCQLLEQQPGTLPLGSTNSPADDPVRFRPHPGM
CCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCEECCCCCC
GFPVSELKALENDPLHPEAPLTARTTFMGLYGVDSPLPTAYIDDITQQREGHEALEGFLD
CCCHHHHHHHCCCCCCCCCCCCHHHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH
IFNHRFMTQFYRIWRKYSYPATFESGGTDNTSQSLLGLIGMGIPGSQQHFATPTSRFLAL
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH
LGVMRQPGRTAEGVQALVRLLAPFTEADVTPHCLRTVRLTSPMAFADEGANWLDGYTVLG
HHHHHCCCCCHHHHHHHHHHHCCHHHCCCCHHHHHHHHHCCCCHHHCCCCCHHCCEEEEC
DEAIDANSQLLISLRTADRDEAANWLPDGPLYTDFLVLLRVYLGWRYRACIQLTVATRLL
CCCCCCCCEEEEEEECCCCHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
PALVLDETPIRLGLTGVLGLDDATRSDDIPEYFTVALGHYRGLAPQQHQEGNRRVNYRLE
HHHHHCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHCCCCEEEEEEC
K
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA