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The map label for this gene is 170024812

Identifier: 170024812

GI number: 170024812

Start: 2842048

End: 2843811

Strand: Reverse

Name: 170024812

Synonym: YPK_2587

Alternate gene names: NA

Gene position: 2843811-2842048 (Counterclockwise)

Preceding gene: 170024813

Following gene: 170024811

Centisome position: 60.64

GC content: 57.94

Gene sequence:

>1764_bases
ATGGACGACTTAACCCTGCGTTATTTTGACGCTGAAATGCGCTACCTGCGCGAAGCGGGCGAAGAGTTTGCCCGCGCGCA
CCCTGATCGGGCTGCCGGATTAAATCTGGATAAAGCCGGGGCGCGTGACCCCTATGTGGAACGCCTGTTTGAAGGCTTTG
CCTTCCTGATGGGCCGCATGCGAGAAAAACTGGATGATGACCTGCCGGAGCTGACCGAAGGGTTGGTCAGCCTGCTGTGG
CCGCACTACCTGCGTACCATTCCGTCGCTTTCTATTGTGGAGTTCACTCCACAATGGCAGGAGATGAAAGAGCGCATGGG
GGTGAGTAAAGGTTTTGAAGTGCTATCCCGCCCCATTGGTGAACGTGAAACCCGTTGCCGCTATACCACCACGCAAGAGA
TGGACCTGCTCCCTCTGACCCTGCGCCGTGCCGGGCTGGACAGTGAACCCGATGGCCGGTCGGTTATCCGGCTGCGCTTT
GATTGCAGCGCGCTGGCCGACTGGAGCCGTATCAACCTGAGCCGCCTGCCGCTCTATTTTGATGCCGATGCGCCGCTGGC
CTGCGCCCTGCATGAGGCGCTGACCCTGAATACCGCCAAACTCTGGATCCGGTTGCCGGGGCAGGCTGATCGCCAGCCGC
TGGACGGCCATTTCGCGCCGCTGGGGTTCGGGGAGCAGGATACGCTGTGGCCGAAGGCCGACAGTGCGTTCAGTGGTTAT
CAGCTCTTGCTGGAGTACTTTACCTTCCGCGAAAAGTTTATGTTTGTCGCGTTGCAGGGGCTGGATGGGATCGAGCTGCC
GGCGGAACTGCCGTGGTTTGAGATTGATGTGGTGCTGGAAAAACGCTGGCAACATGATTTCTCGTTCTCCGAAAAGAACC
TGCGCCTGCATTGTGTGCCGGTGATTAACCTGTTCCCGCTGGAATCGGACCCACTGTCGCTCTCTTCATTACAGACCGAA
TACCTGCTGCGCCCAATGCGCATTCAGGACGGTTATACCGAAGTGTATTCGGTGGACTCGGTGATCTCCTCCCGTCATAC
CGGGCATCAGGTCTATGTCCCGTTCACCAGCTTTCGCCACAAGGGGGGGATGTTGCGCCATGATGCGCCGGAGTATTACT
ACCATACGCGGGTCAAACGCGGGCCTTCGGGGTTACACGATACCTGGCTGGTGCTGGGGGGCGAGGCGTTTGATAACCAC
AGCGTACCGGATAATGAAAATTTGTCGCTGAGCCTGACCGGCACCAACGGGCAGTTACCGCGTAAAGCGCTGCAAAGCAC
GGTGCTGGATACGGCGGTGAAATCCACCGGGGCTCAGGTGCGGGTACGTAATCTCTCCGCGCCGTCATTGCCATGCTACC
CGCCGAACCGCGACCGTTTTCACTGGCGGGTGCTGAGCCATCTGGGCAGCAGTTTTCTGTGGATGATGGATAACGCCGAA
GTGCTGCGCGGCACGCTGGCGCTGTATGACTGGACGGACAACGAAATGAACCGCCGTCGGCTGGAGGCGATCGCCGAGGT
CAAACACAGCGAGATTGAACGCTTTGAGCGGGGCTATTTGCTGCGCGGGGTGCACATTGAAATCACCCTCGACAGCAACG
GCTTTACCGGTACCGGGGATATTTGTCTGTTTGGGGAAATGCTCAGTCGCTTCTTTGCCCTGTATACCGATATTCACCTG
TTTAATCGTCTGACTCTGATACTGCAACCGACAGGAGAACGTTTGGAATGGGAAGAGAATCATCAGTCCCGCCTTCCCGG
CTAA

Upstream 100 bases:

>100_bases
TTATCTTTTTTAAAGGCATTATTAGAGTGGATTAATTCTCCGCAATTAAGCCATTCTTTATCTGATTAGTTTCTATTTTA
TTCGTTTCACTGAGAACCCT

Downstream 100 bases:

>100_bases
TCACCCGGCTTAAGCGCGATATCGGCCAGATCAATTTTTACCGTTTCTGTCAGTTGCTGGAGCAACAACCGGGAACCTTG
CCGCTCGGCAGTACCAACAG

Product: type VI secretion protein

Products: NA

Alternate protein names: Type VI Secretion Protein Family; T6ss C; Type VI Secretion System; Type VI Secretion System Protein EvpF; Type VI Secretion System Protein; Type VI Secretion Protein VasA; Type VI Secretion; Type VI Secretion System Core Protein; Protein ImpG; Cytoplasmic Protein SciC; Type VI Secretion System Protein ImpG; Conserved Protein; Protein ImpG/VasA

Number of amino acids: Translated: 587; Mature: 587

Protein sequence:

>587_residues
MDDLTLRYFDAEMRYLREAGEEFARAHPDRAAGLNLDKAGARDPYVERLFEGFAFLMGRMREKLDDDLPELTEGLVSLLW
PHYLRTIPSLSIVEFTPQWQEMKERMGVSKGFEVLSRPIGERETRCRYTTTQEMDLLPLTLRRAGLDSEPDGRSVIRLRF
DCSALADWSRINLSRLPLYFDADAPLACALHEALTLNTAKLWIRLPGQADRQPLDGHFAPLGFGEQDTLWPKADSAFSGY
QLLLEYFTFREKFMFVALQGLDGIELPAELPWFEIDVVLEKRWQHDFSFSEKNLRLHCVPVINLFPLESDPLSLSSLQTE
YLLRPMRIQDGYTEVYSVDSVISSRHTGHQVYVPFTSFRHKGGMLRHDAPEYYYHTRVKRGPSGLHDTWLVLGGEAFDNH
SVPDNENLSLSLTGTNGQLPRKALQSTVLDTAVKSTGAQVRVRNLSAPSLPCYPPNRDRFHWRVLSHLGSSFLWMMDNAE
VLRGTLALYDWTDNEMNRRRLEAIAEVKHSEIERFERGYLLRGVHIEITLDSNGFTGTGDICLFGEMLSRFFALYTDIHL
FNRLTLILQPTGERLEWEENHQSRLPG

Sequences:

>Translated_587_residues
MDDLTLRYFDAEMRYLREAGEEFARAHPDRAAGLNLDKAGARDPYVERLFEGFAFLMGRMREKLDDDLPELTEGLVSLLW
PHYLRTIPSLSIVEFTPQWQEMKERMGVSKGFEVLSRPIGERETRCRYTTTQEMDLLPLTLRRAGLDSEPDGRSVIRLRF
DCSALADWSRINLSRLPLYFDADAPLACALHEALTLNTAKLWIRLPGQADRQPLDGHFAPLGFGEQDTLWPKADSAFSGY
QLLLEYFTFREKFMFVALQGLDGIELPAELPWFEIDVVLEKRWQHDFSFSEKNLRLHCVPVINLFPLESDPLSLSSLQTE
YLLRPMRIQDGYTEVYSVDSVISSRHTGHQVYVPFTSFRHKGGMLRHDAPEYYYHTRVKRGPSGLHDTWLVLGGEAFDNH
SVPDNENLSLSLTGTNGQLPRKALQSTVLDTAVKSTGAQVRVRNLSAPSLPCYPPNRDRFHWRVLSHLGSSFLWMMDNAE
VLRGTLALYDWTDNEMNRRRLEAIAEVKHSEIERFERGYLLRGVHIEITLDSNGFTGTGDICLFGEMLSRFFALYTDIHL
FNRLTLILQPTGERLEWEENHQSRLPG
>Mature_587_residues
MDDLTLRYFDAEMRYLREAGEEFARAHPDRAAGLNLDKAGARDPYVERLFEGFAFLMGRMREKLDDDLPELTEGLVSLLW
PHYLRTIPSLSIVEFTPQWQEMKERMGVSKGFEVLSRPIGERETRCRYTTTQEMDLLPLTLRRAGLDSEPDGRSVIRLRF
DCSALADWSRINLSRLPLYFDADAPLACALHEALTLNTAKLWIRLPGQADRQPLDGHFAPLGFGEQDTLWPKADSAFSGY
QLLLEYFTFREKFMFVALQGLDGIELPAELPWFEIDVVLEKRWQHDFSFSEKNLRLHCVPVINLFPLESDPLSLSSLQTE
YLLRPMRIQDGYTEVYSVDSVISSRHTGHQVYVPFTSFRHKGGMLRHDAPEYYYHTRVKRGPSGLHDTWLVLGGEAFDNH
SVPDNENLSLSLTGTNGQLPRKALQSTVLDTAVKSTGAQVRVRNLSAPSLPCYPPNRDRFHWRVLSHLGSSFLWMMDNAE
VLRGTLALYDWTDNEMNRRRLEAIAEVKHSEIERFERGYLLRGVHIEITLDSNGFTGTGDICLFGEMLSRFFALYTDIHL
FNRLTLILQPTGERLEWEENHQSRLPG

Specific function: Unknown

COG id: COG3519

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 67510; Mature: 67510

Theoretical pI: Translated: 5.71; Mature: 5.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDDLTLRYFDAEMRYLREAGEEFARAHPDRAAGLNLDKAGARDPYVERLFEGFAFLMGRM
CCCCEEEEEHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
REKLDDDLPELTEGLVSLLWPHYLRTIPSLSIVEFTPQWQEMKERMGVSKGFEVLSRPIG
HHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHCCHHHHHHHHHCCCC
ERETRCRYTTTQEMDLLPLTLRRAGLDSEPDGRSVIRLRFDCSALADWSRINLSRLPLYF
CCCCCEEECCCCCCCCHHHHHHHCCCCCCCCCCEEEEEEECHHHHCCHHHCCHHHCCEEE
DADAPLACALHEALTLNTAKLWIRLPGQADRQPLDGHFAPLGFGEQDTLWPKADSAFSGY
CCCCCHHHHHHHHHEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
QLLLEYFTFREKFMFVALQGLDGIELPAELPWFEIDVVLEKRWQHDFSFSEKNLRLHCVP
HHHHHHHHHHHHEEEEEEECCCCCCCCCCCCCEEEEHHHHHHHCCCCCCCCCCEEEEEEE
VINLFPLESDPLSLSSLQTEYLLRPMRIQDGYTEVYSVDSVISSRHTGHQVYVPFTSFRH
EEEEECCCCCCCCHHHHHHHHHHCCEEECCCCHHHHHHHHHHHCCCCCCEEEEEHHHHHC
KGGMLRHDAPEYYYHTRVKRGPSGLHDTWLVLGGEAFDNHSVPDNENLSLSLTGTNGQLP
CCCCCCCCCCCHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCC
RKALQSTVLDTAVKSTGAQVRVRNLSAPSLPCYPPNRDRFHWRVLSHLGSSFLWMMDNAE
HHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEECCHH
VLRGTLALYDWTDNEMNRRRLEAIAEVKHSEIERFERGYLLRGVHIEITLDSNGFTGTGD
HHEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCCCCCC
ICLFGEMLSRFFALYTDIHLFNRLTLILQPTGERLEWEENHQSRLPG
HHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MDDLTLRYFDAEMRYLREAGEEFARAHPDRAAGLNLDKAGARDPYVERLFEGFAFLMGRM
CCCCEEEEEHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
REKLDDDLPELTEGLVSLLWPHYLRTIPSLSIVEFTPQWQEMKERMGVSKGFEVLSRPIG
HHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHCCHHHHHHHHHCCCC
ERETRCRYTTTQEMDLLPLTLRRAGLDSEPDGRSVIRLRFDCSALADWSRINLSRLPLYF
CCCCCEEECCCCCCCCHHHHHHHCCCCCCCCCCEEEEEEECHHHHCCHHHCCHHHCCEEE
DADAPLACALHEALTLNTAKLWIRLPGQADRQPLDGHFAPLGFGEQDTLWPKADSAFSGY
CCCCCHHHHHHHHHEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
QLLLEYFTFREKFMFVALQGLDGIELPAELPWFEIDVVLEKRWQHDFSFSEKNLRLHCVP
HHHHHHHHHHHHEEEEEEECCCCCCCCCCCCCEEEEHHHHHHHCCCCCCCCCCEEEEEEE
VINLFPLESDPLSLSSLQTEYLLRPMRIQDGYTEVYSVDSVISSRHTGHQVYVPFTSFRH
EEEEECCCCCCCCHHHHHHHHHHCCEEECCCCHHHHHHHHHHHCCCCCCEEEEEHHHHHC
KGGMLRHDAPEYYYHTRVKRGPSGLHDTWLVLGGEAFDNHSVPDNENLSLSLTGTNGQLP
CCCCCCCCCCCHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCC
RKALQSTVLDTAVKSTGAQVRVRNLSAPSLPCYPPNRDRFHWRVLSHLGSSFLWMMDNAE
HHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEECCHH
VLRGTLALYDWTDNEMNRRRLEAIAEVKHSEIERFERGYLLRGVHIEITLDSNGFTGTGD
HHEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCCCCCC
ICLFGEMLSRFFALYTDIHLFNRLTLILQPTGERLEWEENHQSRLPG
HHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA