| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
Click here to switch to the map view.
The map label for this gene is 170024810
Identifier: 170024810
GI number: 170024810
Start: 2840443
End: 2841024
Strand: Reverse
Name: 170024810
Synonym: YPK_2585
Alternate gene names: NA
Gene position: 2841024-2840443 (Counterclockwise)
Preceding gene: 170024811
Following gene: 170024809
Centisome position: 60.58
GC content: 52.92
Gene sequence:
>582_bases GTGTTAACTACCGTTTGGAAAAATAAAACCTGTACTTCGAAACATAAAAGCTGGGCCGCCTGGAAAAATAAAATCTGCAT CCCCGCACTGGTCTTGTTGCTCAGTGGCTGCGGGCTGACGCAAGCCGTGACCGATAGCACCGTGTCGGCCACAAAATCAC TGTTTTATAAGCAGATAAAGGTGCTGCATCTGGACTTTACCGCCCGTGAAGCCCTGAATACCGATGAGCACGAAGCGAAC TCGTCATCGGAGCCGGTAATGGTGCGGGTTTATCAGTTACGTGATGATAAAACCTTCCTCAAAACGGTGTATCAACAACT GGCAAGCGACGGGGAGGCGGCGCTTAAAGATGACCTGCTGGCCAGCCGCAGTGTGGTGGTGAAACCGGGCGGGGCGGTAA CACTGGATATGCCGATGGAAAAAGAGACCCAGTTTGTGGCAGTGGTGGCGCTGTTCCGCCATCCGGATATGGCCAAAGAC CACTGGCGTCTGATACTCACGCTGGACGACCTGCATCCCGATAAGCCCCGTACCCTTGAGTTGGGCAATAACAGCCTGAC ATTGCGGGCGGAGAAAAAATAA
Upstream 100 bases:
>100_bases GATGACGCGACGCGGTCAGACGATATACCTGAATATTTTACCGTGGCGCTGGGCCACTACCGTGGGCTGGCTCCACAGCA ACATCAAGAAGGAAACCGAC
Downstream 100 bases:
>100_bases TGCCGGATTCCTCCTCGCCGTCACTGTATGAGCAATTGCTGGGCAATTTCACCGGCGGGCTTGACCTGCATCAGGTCAGT GACGAAAACCAGGTCATTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 193; Mature: 193
Protein sequence:
>193_residues MLTTVWKNKTCTSKHKSWAAWKNKICIPALVLLLSGCGLTQAVTDSTVSATKSLFYKQIKVLHLDFTAREALNTDEHEAN SSSEPVMVRVYQLRDDKTFLKTVYQQLASDGEAALKDDLLASRSVVVKPGGAVTLDMPMEKETQFVAVVALFRHPDMAKD HWRLILTLDDLHPDKPRTLELGNNSLTLRAEKK
Sequences:
>Translated_193_residues MLTTVWKNKTCTSKHKSWAAWKNKICIPALVLLLSGCGLTQAVTDSTVSATKSLFYKQIKVLHLDFTAREALNTDEHEAN SSSEPVMVRVYQLRDDKTFLKTVYQQLASDGEAALKDDLLASRSVVVKPGGAVTLDMPMEKETQFVAVVALFRHPDMAKD HWRLILTLDDLHPDKPRTLELGNNSLTLRAEKK >Mature_193_residues MLTTVWKNKTCTSKHKSWAAWKNKICIPALVLLLSGCGLTQAVTDSTVSATKSLFYKQIKVLHLDFTAREALNTDEHEAN SSSEPVMVRVYQLRDDKTFLKTVYQQLASDGEAALKDDLLASRSVVVKPGGAVTLDMPMEKETQFVAVVALFRHPDMAKD HWRLILTLDDLHPDKPRTLELGNNSLTLRAEKK
Specific function: Unknown
COG id: COG3521
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21622; Mature: 21622
Theoretical pI: Translated: 8.83; Mature: 8.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTTVWKNKTCTSKHKSWAAWKNKICIPALVLLLSGCGLTQAVTDSTVSATKSLFYKQIK CCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHE VLHLDFTAREALNTDEHEANSSSEPVMVRVYQLRDDKTFLKTVYQQLASDGEAALKDDLL EEEECCHHHHHCCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHH ASRSVVVKPGGAVTLDMPMEKETQFVAVVALFRHPDMAKDHWRLILTLDDLHPDKPRTLE HCCEEEECCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCEEE LGNNSLTLRAEKK ECCCEEEEEEECC >Mature Secondary Structure MLTTVWKNKTCTSKHKSWAAWKNKICIPALVLLLSGCGLTQAVTDSTVSATKSLFYKQIK CCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHE VLHLDFTAREALNTDEHEANSSSEPVMVRVYQLRDDKTFLKTVYQQLASDGEAALKDDLL EEEECCHHHHHCCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHH ASRSVVVKPGGAVTLDMPMEKETQFVAVVALFRHPDMAKDHWRLILTLDDLHPDKPRTLE HCCEEEECCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCEEE LGNNSLTLRAEKK ECCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA