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The map label for this gene is ybiT [H]

Identifier: 170024806

GI number: 170024806

Start: 2835489

End: 2837084

Strand: Reverse

Name: ybiT [H]

Synonym: YPK_2581

Alternate gene names: 170024806

Gene position: 2837084-2835489 (Counterclockwise)

Preceding gene: 170024808

Following gene: 170024805

Centisome position: 60.5

GC content: 47.49

Gene sequence:

>1596_bases
GTGCTAAGTACTAACAATATCACCATGCAATTCGGCAGCAAGCCGCTGTTTGAAAACATTTCAGTCAAATTCGGTGGCGG
TAACCGCTATGGCCTGATCGGCGCTAATGGTTGTGGTAAATCCACATTCATGAAGATTCTGGGGGGCGATCTGGTCCCTA
GCGGCGGTAACGTCTTCCTTGACCCGAATGAGCGTCTGGGTAAACTTCGTCAGGATCAATTCGCCTTTGAAAACAATACA
GTGCTGGATACCGTTATTATGGGACACGGCGAACTGTGGGAAGTAAAAGAAGAGCGTGACCGCATTTATGCCATGGCTGA
AATGAGCGAAGAAGATGGCTATAAAGTTGCTGATCTGGAAGTTGCCTACGGTGAAATGGATGGCTACAGCGCAGAAGCCC
GTGCTGGTGAGTTGTTGCTGGGCGTGGGTATTCCCGTTGAACAGCATTATGGCTTGATGAGCGAAATCGCACCCGGTTGG
AAGTTACGTGTATTGCTGGCGCAAGCCTTGTTCTCCGATCCAGAAATTCTGTTACTTGATGAGCCAACCAACAACCTGGA
TATCGATACTATCCGTTGGTTAGAGCAGGTGCTAAACGAACGTAACAGCACCATGATTATTATTTCCCATGACCGTCACT
TCCTTAACATGGTGTGTACGCATATGGCGGATCTGGATTACGGCGAACTGCGCGTTTATCCAGGTAACTATGATGAGTAT
ATGACCGCAGCGACTCAAGCTCGCGAGCGTTTGTTGTCAGATAATGCGAAGAAAAAAGCCCAAATATCTGAACTGCAATC
TTTCGTTAGCCGCTTTAGCGCCAACGCCTCTAAATCTAAGCAGGCAACTTCACGTGCTCGCCAGATTGATAAAATTCAGC
TTGATGAGGTAAAAGCCTCCAGCCGCCAGAACCCGTTTATTCGCTTCGATCAGGATAGAAAACTGTTCCGTAATGCGCTG
GAAGTTGAGATGTTGACCAAAGGTTTTGATAACGGTCCGCTGTTTAAAAATCTGACTCTCCGCCTGGAAGTGGGTGAGAG
AGTGGCTATCCTCGGGCCGAACGGTATTGGTAAGTCTACTTTGCTGAAAACCCTGCTAGGGGAGTATGAATCTGATGCTG
GGACCGTAAAATGGTCTGAAAACAGTAAGATTGGTTACTACGCACAGGATCACGCCAGTGATTTTGACATCGATCTGACG
GTGTTTGACTGGATGAGCCAGTGGAAGCAAGAGAAAGACGATGAGCAGGCGGTTCGCAGTGTGCTGGGGCGTTTGTTGTT
TAGCCAGGATGACATCAAGAAAAAAGTTAGCGTGCTGTCTGGTGGTGAGAAAGGGCGGATGTTGTTTGGTAAGTTGATGA
TGCAGCGCCCTAACATTTTAGTCATGGATGAACCAACCAACCACTTGGATATGGAGTCCATTGAATCTCTCAATATGGCA
TTGGAAATGTACGAAGGGACATTAATCTTCGTCTCCCATGACCGCGAGTTTGTGAGTTCACTGGCAACCCGCGTGATTGA
AATGACGCCGAATAAGCTTATCGACTTTACCGGTAACTACGAAGATTATCTGAGTAGCCAAGGGATTCAGTCATAA

Upstream 100 bases:

>100_bases
AGGCGATACTCTCGCCATCTTGTGGCATAATGCGCGCCGAATCACACTTTTTATTCTTCTTGAATATCCCTATTCAGTCA
TCAAATCGAGAGCGAGCTCT

Downstream 100 bases:

>100_bases
TTATTTGATTGACCTAACAAAAAAAGCTGATGCTATGCGTCAGCTTTTTTTATGTCTTCACGTTAAGTAATATAAAATAC
GGACAATAATAGAAATAAAG

Product: ABC transporter-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 531; Mature: 531

Protein sequence:

>531_residues
MLSTNNITMQFGSKPLFENISVKFGGGNRYGLIGANGCGKSTFMKILGGDLVPSGGNVFLDPNERLGKLRQDQFAFENNT
VLDTVIMGHGELWEVKEERDRIYAMAEMSEEDGYKVADLEVAYGEMDGYSAEARAGELLLGVGIPVEQHYGLMSEIAPGW
KLRVLLAQALFSDPEILLLDEPTNNLDIDTIRWLEQVLNERNSTMIIISHDRHFLNMVCTHMADLDYGELRVYPGNYDEY
MTAATQARERLLSDNAKKKAQISELQSFVSRFSANASKSKQATSRARQIDKIQLDEVKASSRQNPFIRFDQDRKLFRNAL
EVEMLTKGFDNGPLFKNLTLRLEVGERVAILGPNGIGKSTLLKTLLGEYESDAGTVKWSENSKIGYYAQDHASDFDIDLT
VFDWMSQWKQEKDDEQAVRSVLGRLLFSQDDIKKKVSVLSGGEKGRMLFGKLMMQRPNILVMDEPTNHLDMESIESLNMA
LEMYEGTLIFVSHDREFVSSLATRVIEMTPNKLIDFTGNYEDYLSSQGIQS

Sequences:

>Translated_531_residues
MLSTNNITMQFGSKPLFENISVKFGGGNRYGLIGANGCGKSTFMKILGGDLVPSGGNVFLDPNERLGKLRQDQFAFENNT
VLDTVIMGHGELWEVKEERDRIYAMAEMSEEDGYKVADLEVAYGEMDGYSAEARAGELLLGVGIPVEQHYGLMSEIAPGW
KLRVLLAQALFSDPEILLLDEPTNNLDIDTIRWLEQVLNERNSTMIIISHDRHFLNMVCTHMADLDYGELRVYPGNYDEY
MTAATQARERLLSDNAKKKAQISELQSFVSRFSANASKSKQATSRARQIDKIQLDEVKASSRQNPFIRFDQDRKLFRNAL
EVEMLTKGFDNGPLFKNLTLRLEVGERVAILGPNGIGKSTLLKTLLGEYESDAGTVKWSENSKIGYYAQDHASDFDIDLT
VFDWMSQWKQEKDDEQAVRSVLGRLLFSQDDIKKKVSVLSGGEKGRMLFGKLMMQRPNILVMDEPTNHLDMESIESLNMA
LEMYEGTLIFVSHDREFVSSLATRVIEMTPNKLIDFTGNYEDYLSSQGIQS
>Mature_531_residues
MLSTNNITMQFGSKPLFENISVKFGGGNRYGLIGANGCGKSTFMKILGGDLVPSGGNVFLDPNERLGKLRQDQFAFENNT
VLDTVIMGHGELWEVKEERDRIYAMAEMSEEDGYKVADLEVAYGEMDGYSAEARAGELLLGVGIPVEQHYGLMSEIAPGW
KLRVLLAQALFSDPEILLLDEPTNNLDIDTIRWLEQVLNERNSTMIIISHDRHFLNMVCTHMADLDYGELRVYPGNYDEY
MTAATQARERLLSDNAKKKAQISELQSFVSRFSANASKSKQATSRARQIDKIQLDEVKASSRQNPFIRFDQDRKLFRNAL
EVEMLTKGFDNGPLFKNLTLRLEVGERVAILGPNGIGKSTLLKTLLGEYESDAGTVKWSENSKIGYYAQDHASDFDIDLT
VFDWMSQWKQEKDDEQAVRSVLGRLLFSQDDIKKKVSVLSGGEKGRMLFGKLMMQRPNILVMDEPTNHLDMESIESLNMA
LEMYEGTLIFVSHDREFVSSLATRVIEMTPNKLIDFTGNYEDYLSSQGIQS

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=527, Percent_Identity=30.9297912713473, Blast_Score=259, Evalue=5e-69,
Organism=Homo sapiens, GI27881506, Length=534, Percent_Identity=31.0861423220974, Blast_Score=249, Evalue=4e-66,
Organism=Homo sapiens, GI10947137, Length=534, Percent_Identity=31.0861423220974, Blast_Score=249, Evalue=5e-66,
Organism=Homo sapiens, GI69354671, Length=527, Percent_Identity=30.3605313092979, Blast_Score=215, Evalue=7e-56,
Organism=Homo sapiens, GI10947135, Length=527, Percent_Identity=30.3605313092979, Blast_Score=215, Evalue=1e-55,
Organism=Escherichia coli, GI1787041, Length=530, Percent_Identity=86.7924528301887, Blast_Score=971, Evalue=0.0,
Organism=Escherichia coli, GI1789751, Length=528, Percent_Identity=32.5757575757576, Blast_Score=289, Evalue=4e-79,
Organism=Escherichia coli, GI1787182, Length=534, Percent_Identity=31.4606741573034, Blast_Score=248, Evalue=6e-67,
Organism=Escherichia coli, GI2367384, Length=518, Percent_Identity=29.7297297297297, Blast_Score=220, Evalue=2e-58,
Organism=Escherichia coli, GI1786975, Length=518, Percent_Identity=22.7799227799228, Blast_Score=99, Evalue=5e-22,
Organism=Escherichia coli, GI1788165, Length=209, Percent_Identity=30.622009569378, Blast_Score=86, Evalue=8e-18,
Organism=Escherichia coli, GI1788761, Length=212, Percent_Identity=26.8867924528302, Blast_Score=80, Evalue=4e-16,
Organism=Escherichia coli, GI87081791, Length=230, Percent_Identity=28.695652173913, Blast_Score=79, Evalue=6e-16,
Organism=Escherichia coli, GI1786345, Length=257, Percent_Identity=28.0155642023346, Blast_Score=78, Evalue=2e-15,
Organism=Escherichia coli, GI87081709, Length=214, Percent_Identity=27.5700934579439, Blast_Score=74, Evalue=3e-14,
Organism=Escherichia coli, GI1786803, Length=220, Percent_Identity=28.6363636363636, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI48994943, Length=229, Percent_Identity=30.1310043668122, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI1787758, Length=199, Percent_Identity=26.1306532663317, Blast_Score=70, Evalue=4e-13,
Organism=Escherichia coli, GI1786698, Length=196, Percent_Identity=29.5918367346939, Blast_Score=69, Evalue=1e-12,
Organism=Escherichia coli, GI87081834, Length=200, Percent_Identity=27, Blast_Score=68, Evalue=1e-12,
Organism=Escherichia coli, GI1789891, Length=206, Percent_Identity=26.2135922330097, Blast_Score=68, Evalue=1e-12,
Organism=Escherichia coli, GI1789672, Length=219, Percent_Identity=25.5707762557078, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI145693107, Length=395, Percent_Identity=23.7974683544304, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI1790739, Length=211, Percent_Identity=23.696682464455, Blast_Score=64, Evalue=3e-11,
Organism=Escherichia coli, GI48995001, Length=218, Percent_Identity=27.0642201834862, Blast_Score=62, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI17555318, Length=540, Percent_Identity=29.8148148148148, Blast_Score=249, Evalue=2e-66,
Organism=Caenorhabditis elegans, GI17553372, Length=535, Percent_Identity=30.0934579439252, Blast_Score=234, Evalue=1e-61,
Organism=Caenorhabditis elegans, GI17559834, Length=547, Percent_Identity=27.9707495429616, Blast_Score=223, Evalue=2e-58,
Organism=Saccharomyces cerevisiae, GI6320874, Length=514, Percent_Identity=31.5175097276265, Blast_Score=261, Evalue=2e-70,
Organism=Saccharomyces cerevisiae, GI6321121, Length=534, Percent_Identity=31.0861423220974, Blast_Score=245, Evalue=2e-65,
Organism=Saccharomyces cerevisiae, GI6325030, Length=392, Percent_Identity=28.0612244897959, Blast_Score=127, Evalue=5e-30,
Organism=Saccharomyces cerevisiae, GI6323278, Length=412, Percent_Identity=25, Blast_Score=121, Evalue=3e-28,
Organism=Saccharomyces cerevisiae, GI6324314, Length=251, Percent_Identity=27.8884462151394, Blast_Score=96, Evalue=2e-20,
Organism=Drosophila melanogaster, GI24666836, Length=513, Percent_Identity=31.3840155945419, Blast_Score=262, Evalue=5e-70,
Organism=Drosophila melanogaster, GI24642252, Length=536, Percent_Identity=30.410447761194, Blast_Score=260, Evalue=2e-69,
Organism=Drosophila melanogaster, GI18859989, Length=536, Percent_Identity=30.410447761194, Blast_Score=260, Evalue=2e-69,
Organism=Drosophila melanogaster, GI24641342, Length=540, Percent_Identity=30.1851851851852, Blast_Score=240, Evalue=2e-63,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 59878; Mature: 59878

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSTNNITMQFGSKPLFENISVKFGGGNRYGLIGANGCGKSTFMKILGGDLVPSGGNVFL
CCCCCCEEEEECCCCCCCCCEEEECCCCEEEEEECCCCCHHHHHHHHCCCCCCCCCCEEE
DPNERLGKLRQDQFAFENNTVLDTVIMGHGELWEVKEERDRIYAMAEMSEEDGYKVADLE
CCHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEHHHHHHHEEEEECCCCCCCCEEEEEE
VAYGEMDGYSAEARAGELLLGVGIPVEQHYGLMSEIAPGWKLRVLLAQALFSDPEILLLD
EEECCCCCCCCCCCCCCEEEECCCCHHHHCCHHHHCCCCHHHHHHHHHHHHCCCCEEEEE
EPTNNLDIDTIRWLEQVLNERNSTMIIISHDRHFLNMVCTHMADLDYGELRVYPGNYDEY
CCCCCCCHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHCCCCCCCEEEECCCHHHH
MTAATQARERLLSDNAKKKAQISELQSFVSRFSANASKSKQATSRARQIDKIQLDEVKAS
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHC
SRQNPFIRFDQDRKLFRNALEVEMLTKGFDNGPLFKNLTLRLEVGERVAILGPNGIGKST
CCCCCCEEECCHHHHHHHHHHHHHHHCCCCCCCCEECEEEEEEECCEEEEECCCCCCHHH
LLKTLLGEYESDAGTVKWSENSKIGYYAQDHASDFDIDLTVFDWMSQWKQEKDDEQAVRS
HHHHHHHHCCCCCCEEEECCCCCEEEEECCCCCCCEEEEHHHHHHHHHHCCCCHHHHHHH
VLGRLLFSQDDIKKKVSVLSGGEKGRMLFGKLMMQRPNILVMDEPTNHLDMESIESLNMA
HHHHHHHCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHH
LEMYEGTLIFVSHDREFVSSLATRVIEMTPNKLIDFTGNYEDYLSSQGIQS
HEEECCEEEEEECCHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHCCCCCC
>Mature Secondary Structure
MLSTNNITMQFGSKPLFENISVKFGGGNRYGLIGANGCGKSTFMKILGGDLVPSGGNVFL
CCCCCCEEEEECCCCCCCCCEEEECCCCEEEEEECCCCCHHHHHHHHCCCCCCCCCCEEE
DPNERLGKLRQDQFAFENNTVLDTVIMGHGELWEVKEERDRIYAMAEMSEEDGYKVADLE
CCHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEHHHHHHHEEEEECCCCCCCCEEEEEE
VAYGEMDGYSAEARAGELLLGVGIPVEQHYGLMSEIAPGWKLRVLLAQALFSDPEILLLD
EEECCCCCCCCCCCCCCEEEECCCCHHHHCCHHHHCCCCHHHHHHHHHHHHCCCCEEEEE
EPTNNLDIDTIRWLEQVLNERNSTMIIISHDRHFLNMVCTHMADLDYGELRVYPGNYDEY
CCCCCCCHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHCCCCCCCEEEECCCHHHH
MTAATQARERLLSDNAKKKAQISELQSFVSRFSANASKSKQATSRARQIDKIQLDEVKAS
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHC
SRQNPFIRFDQDRKLFRNALEVEMLTKGFDNGPLFKNLTLRLEVGERVAILGPNGIGKST
CCCCCCEEECCHHHHHHHHHHHHHHHCCCCCCCCEECEEEEEEECCEEEEECCCCCCHHH
LLKTLLGEYESDAGTVKWSENSKIGYYAQDHASDFDIDLTVFDWMSQWKQEKDDEQAVRS
HHHHHHHHCCCCCCEEEECCCCCEEEEECCCCCCCEEEEHHHHHHHHHHCCCCHHHHHHH
VLGRLLFSQDDIKKKVSVLSGGEKGRMLFGKLMMQRPNILVMDEPTNHLDMESIESLNMA
HHHHHHHCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHH
LEMYEGTLIFVSHDREFVSSLATRVIEMTPNKLIDFTGNYEDYLSSQGIQS
HEEECCEEEEEECCHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]