| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is 170024805
Identifier: 170024805
GI number: 170024805
Start: 2834624
End: 2835271
Strand: Reverse
Name: 170024805
Synonym: YPK_2580
Alternate gene names: NA
Gene position: 2835271-2834624 (Counterclockwise)
Preceding gene: 170024806
Following gene: 170024794
Centisome position: 60.46
GC content: 35.65
Gene sequence:
>648_bases ATGAATATCAGTGGGCATATAGCAACGGGTTTAGATTATGGTTGGCAGGGGATAGGGTATCTTGAACGAGGGGTTCATTG GTTAAAAACCGGGTTGGATGCGGTAGGGAAATGTGCTGGGTTACCTGAATTACAGCCTGCGGTCTATCTCTCATCTCTAA ATATAAAATACAATAAGATTGATCAAGACACCCAAGAAACTCTTAAGAATATTAACGATAAATTACGCCGTGCCTTTTTA CTAACATCGACGGAACAGATAGAAGAAAAACAAAAAATTATTGATGCCGTGAGTGATGACTTAGAAAAAATGAAGCGTAA TGTGCTCAGTGAGAGAGGCGATTTATATTGTGGTGAAGAAGTAAAACTACATGGAAAAATGCGGACAACATTAAGTGAAC ACATTACAGTTGAACGAAGAGATAATTTTATTAAATCACTCGTCAACTTATATCAGATTGTGAGAGGTGTTAAGGCTACG ATTACTAACGCCCCGAATAATACAATAAGCAGTTTGATAAATTTAAATTCTAATGAATTTCATAGTGGTTTTTTCAAAAT AGGTGATGTTTTGGATCGAGATTTTAACGCCATTGAAAAAAACAATAGAGTACCTAATGTAATCGTTGATACGCATTTTG ATGAGTAA
Upstream 100 bases:
>100_bases TACTGTTTAACTAAAAGTATATCGATGACCATTAATTTAATATTACTGCATAGCCTGATTCTCAATAACCAATAGTTAAT TATTTAATGGAGCAAGGGAT
Downstream 100 bases:
>100_bases ATATAACAAAGACACCATCTGATTTTTTTTATTCAACTGGGGAGTATTTCTGCCCCAGTTTAATGTATTCATTATAGTGG CGATCTTCTATCACTCTGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 215; Mature: 215
Protein sequence:
>215_residues MNISGHIATGLDYGWQGIGYLERGVHWLKTGLDAVGKCAGLPELQPAVYLSSLNIKYNKIDQDTQETLKNINDKLRRAFL LTSTEQIEEKQKIIDAVSDDLEKMKRNVLSERGDLYCGEEVKLHGKMRTTLSEHITVERRDNFIKSLVNLYQIVRGVKAT ITNAPNNTISSLINLNSNEFHSGFFKIGDVLDRDFNAIEKNNRVPNVIVDTHFDE
Sequences:
>Translated_215_residues MNISGHIATGLDYGWQGIGYLERGVHWLKTGLDAVGKCAGLPELQPAVYLSSLNIKYNKIDQDTQETLKNINDKLRRAFL LTSTEQIEEKQKIIDAVSDDLEKMKRNVLSERGDLYCGEEVKLHGKMRTTLSEHITVERRDNFIKSLVNLYQIVRGVKAT ITNAPNNTISSLINLNSNEFHSGFFKIGDVLDRDFNAIEKNNRVPNVIVDTHFDE >Mature_215_residues MNISGHIATGLDYGWQGIGYLERGVHWLKTGLDAVGKCAGLPELQPAVYLSSLNIKYNKIDQDTQETLKNINDKLRRAFL LTSTEQIEEKQKIIDAVSDDLEKMKRNVLSERGDLYCGEEVKLHGKMRTTLSEHITVERRDNFIKSLVNLYQIVRGVKAT ITNAPNNTISSLINLNSNEFHSGFFKIGDVLDRDFNAIEKNNRVPNVIVDTHFDE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24363; Mature: 24363
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNISGHIATGLDYGWQGIGYLERGVHWLKTGLDAVGKCAGLPELQPAVYLSSLNIKYNKI CCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCEECCC DQDTQETLKNINDKLRRAFLLTSTEQIEEKQKIIDAVSDDLEKMKRNVLSERGDLYCGEE CCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCC VKLHGKMRTTLSEHITVERRDNFIKSLVNLYQIVRGVKATITNAPNNTISSLINLNSNEF EEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCHH HSGFFKIGDVLDRDFNAIEKNNRVPNVIVDTHFDE HHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCC >Mature Secondary Structure MNISGHIATGLDYGWQGIGYLERGVHWLKTGLDAVGKCAGLPELQPAVYLSSLNIKYNKI CCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCEECCC DQDTQETLKNINDKLRRAFLLTSTEQIEEKQKIIDAVSDDLEKMKRNVLSERGDLYCGEE CCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCC VKLHGKMRTTLSEHITVERRDNFIKSLVNLYQIVRGVKATITNAPNNTISSLINLNSNEF EEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCHH HSGFFKIGDVLDRDFNAIEKNNRVPNVIVDTHFDE HHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA