| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is 170024546
Identifier: 170024546
GI number: 170024546
Start: 2559863
End: 2560726
Strand: Direct
Name: 170024546
Synonym: YPK_2321
Alternate gene names: NA
Gene position: 2559863-2560726 (Clockwise)
Preceding gene: 170024545
Following gene: 170024547
Centisome position: 54.59
GC content: 55.09
Gene sequence:
>864_bases ATGACCAAGGGTGCTTATTACAACGAGATTGATCCCTACGCCGCTCAGTGGCTGAGAAATCTTATTAAGGCCGGCCATAT CAACCCAGGCTATGTTGACGAGCGGAGCATTGTAGATGTTAAACCAGAAGACCTCACCGAATTTACCCAGTGCCATTTCT TCGCAGGAATTGGGGTTTGGTCATACGCCTTGCGTAGAGCCGGATGGCCCGATGATGAGCCGGTCTGGACCGGTTCTTGC CCCTGCCAACCTTTCAGCGCGGCAGGCAAAGGCGCGGGGTTTGATGATGAGCGGCACTTATGGCCTTCATTCTTCCATCT CATCCAGCAGTGCCGGCCTTCAACAGTTTTTGGTGAACAGGTTGCAAGTAAAGACGGCCTTGCATGGCTCGACCTTGTAC AAACTGACTTGGAAGGTGCGAACTACACCCCAGCAGCGGTCGATCTTTGCGCTGCGGGCTTCGGTGCGCCGAACATCAGG CAGCGCCTTTTCTGGGTGGCTGACACCGTTAGCGACAGAAGCCCGGCAGGGGTATCAGAATCGAAATACGGGCAAGAAAG GGGCTCAGGAAAGTCTCACGACAGTGGTGATCAATTCAGTTGGGAATCGCGACCATCTTCCGCCGCATCAGCCATGCCGA CTAACGGCTTCTGGTCAGATGCTGACTGGCTCTTGTGCAGAGATGGAAAGTGGCGGCCAGTTGAACCCGGCACATTCCCG TTGGCTCATGGGGTTGCCACCAGAGTGGGACGTTTGCGCGCCTACGGAAACGCCATCAATGCTTCGACGGCGGAAGCGTC CATAAGGGCGTACTTAGCCACGCCACTGTGGATAGGTATTGATCTGGCTGGTATTGCTGAATGA
Upstream 100 bases:
>100_bases GTTTTGATATTCACAGCATTACCGCCCCCCGCTCTGCCAGTTGCAAAGCTGGTGGCCGTAAGGCAGTAGGTGAAATTATT GCAACCTTGAGGGCTGCAAT
Downstream 100 bases:
>100_bases CCACGCATGCTCGTGGCCGCATCACCCCAACTCCACCGCTGCCTTATCCGGGCAGCGGTGATGTTTCTATTAAATGGGAT CATCCGTGGAATGCCCCGCG
Product: C-5 cytosine-specific DNA methylase
Products: NA
Alternate protein names: Methyltransferase; Phage Methyltransferase; Site-Specific DNA Methylase; Cytosine-Specific Methyltransferase; Site-Specific DNA-Methyltransferase; Cytosine-Specific Methyltransferase Protein; Phage Methyltransferase Protein; Cytosine-Specific DNA-Methyltransferase
Number of amino acids: Translated: 287; Mature: 286
Protein sequence:
>287_residues MTKGAYYNEIDPYAAQWLRNLIKAGHINPGYVDERSIVDVKPEDLTEFTQCHFFAGIGVWSYALRRAGWPDDEPVWTGSC PCQPFSAAGKGAGFDDERHLWPSFFHLIQQCRPSTVFGEQVASKDGLAWLDLVQTDLEGANYTPAAVDLCAAGFGAPNIR QRLFWVADTVSDRSPAGVSESKYGQERGSGKSHDSGDQFSWESRPSSAASAMPTNGFWSDADWLLCRDGKWRPVEPGTFP LAHGVATRVGRLRAYGNAINASTAEASIRAYLATPLWIGIDLAGIAE
Sequences:
>Translated_287_residues MTKGAYYNEIDPYAAQWLRNLIKAGHINPGYVDERSIVDVKPEDLTEFTQCHFFAGIGVWSYALRRAGWPDDEPVWTGSC PCQPFSAAGKGAGFDDERHLWPSFFHLIQQCRPSTVFGEQVASKDGLAWLDLVQTDLEGANYTPAAVDLCAAGFGAPNIR QRLFWVADTVSDRSPAGVSESKYGQERGSGKSHDSGDQFSWESRPSSAASAMPTNGFWSDADWLLCRDGKWRPVEPGTFP LAHGVATRVGRLRAYGNAINASTAEASIRAYLATPLWIGIDLAGIAE >Mature_286_residues TKGAYYNEIDPYAAQWLRNLIKAGHINPGYVDERSIVDVKPEDLTEFTQCHFFAGIGVWSYALRRAGWPDDEPVWTGSCP CQPFSAAGKGAGFDDERHLWPSFFHLIQQCRPSTVFGEQVASKDGLAWLDLVQTDLEGANYTPAAVDLCAAGFGAPNIRQ RLFWVADTVSDRSPAGVSESKYGQERGSGKSHDSGDQFSWESRPSSAASAMPTNGFWSDADWLLCRDGKWRPVEPGTFPL AHGVATRVGRLRAYGNAINASTAEASIRAYLATPLWIGIDLAGIAE
Specific function: Unknown
COG id: COG0270
COG function: function code L; Site-specific DNA methylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31381; Mature: 31250
Theoretical pI: Translated: 4.98; Mature: 4.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKGAYYNEIDPYAAQWLRNLIKAGHINPGYVDERSIVDVKPEDLTEFTQCHFFAGIGVW CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHH SYALRRAGWPDDEPVWTGSCPCQPFSAAGKGAGFDDERHLWPSFFHLIQQCRPSTVFGEQ HHHHHHCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHH VASKDGLAWLDLVQTDLEGANYTPAAVDLCAAGFGAPNIRQRLFWVADTVSDRSPAGVSE HHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCH SKYGQERGSGKSHDSGDQFSWESRPSSAASAMPTNGFWSDADWLLCRDGKWRPVEPGTFP HHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCH LAHGVATRVGRLRAYGNAINASTAEASIRAYLATPLWIGIDLAGIAE HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCEEEEEEHHCCCC >Mature Secondary Structure TKGAYYNEIDPYAAQWLRNLIKAGHINPGYVDERSIVDVKPEDLTEFTQCHFFAGIGVW CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHH SYALRRAGWPDDEPVWTGSCPCQPFSAAGKGAGFDDERHLWPSFFHLIQQCRPSTVFGEQ HHHHHHCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHH VASKDGLAWLDLVQTDLEGANYTPAAVDLCAAGFGAPNIRQRLFWVADTVSDRSPAGVSE HHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCH SKYGQERGSGKSHDSGDQFSWESRPSSAASAMPTNGFWSDADWLLCRDGKWRPVEPGTFP HHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCH LAHGVATRVGRLRAYGNAINASTAEASIRAYLATPLWIGIDLAGIAE HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCEEEEEEHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA