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The map label for this gene is 170024547

Identifier: 170024547

GI number: 170024547

Start: 2560723

End: 2563278

Strand: Direct

Name: 170024547

Synonym: YPK_2322

Alternate gene names: NA

Gene position: 2560723-2563278 (Clockwise)

Preceding gene: 170024546

Following gene: 170024548

Centisome position: 54.61

GC content: 52.86

Gene sequence:

>2556_bases
ATGACCACGCATGCTCGTGGCCGCATCACCCCAACTCCACCGCTGCCTTATCCGGGCAGCGGTGATGTTTCTATTAAATG
GGATCATCCGTGGAATGCCCCGCGCCCCGCGATTGGTGGTCACCAATCTTTAGTGCCGGCCGCAGTGGTAGCAAAACCAA
AATCTCACCCGCTGGTTATCCGTTACGTAAAACGCCTGAATGCGCTGGGCTATACCGAACTACGGGAGCCTAACCTCACA
TTGCTTAAGATTCGTAAGGAGCGCGCCGCACTTGAGCGCCAGATCTATTTGAGGGACAAGCAACAATGGGCGGATTCACC
GCAAGGTGTAGAAACCCGCATTGATCAGCAACCTATATTTATTAAGTCCCACTTTCAAAATAAAATTAGATGGTTACGTG
AAAATCATGGTGATAAACATACCAATGCATTCTTAACCGGTACCGGCAAGAATGCATTGTTACGTCTGGATGCCGTGCGC
CAATACCAAGGCGTTAGCCAGGGTCGTATTTCTGAGTTAATGGCCTATTTTCAGGGTATCTATAGTCATCTTGCCGAACT
GAACAAGCGCCGGGTCAAGTCGCTGGCGAATGAGGTGGCTGGCCGTATTAATGAAATGTTCTGCACTGAGGTATCAACAC
CCACCGAAGAAACCCGTATTTTATCTGATGCCGAGTTATTGACCATTTATCGCAATATTGCGCTTGAGGTGTGGTCTTTA
CGGGTCAGGCCGCCGCACTGGCGCGAGTTGGGGCCGAAGCCCGGCCAGCCTGACGAGCCAGTGGATCGCACGATCTACTA
TTCTGCTATTGCCCGATTGATAAACCCCGACTGGTGGGAGAGTAAATTGTGGCGGCTGCGTAATGATTGGCGAGAAAGCC
AGTTACGCGCCGCTGGCTTGATCCATAAACGCGCTGCACCTTATGTCAGTAAAGAGGCGCTGGCCGACTGGATAGAGCAA
AAACGCCGCAACCGTGAATTCTTCAAGCGGCATGAATTGATTGATGATGAGGGTAACACCGTTTCTTTAGAGGCAATGGT
GGATGCCAGCATCAGCAATCCGACAATCCGCCGTCATGAGTTGATGGCGCGTATGCAAGGGATCGAACTGGTTGCACAGT
CGCGTGGTGATGTTGGGGTGTTTTACACAATCACTTGCCCGTCTAAATACCACGCCAACAACCAAAGCGGCCACGCTAAC
CCAAAATGGAATCACAGCACGCCACCACAGGCGCAAGCCTATCTCACCAAGCTGTGGGCCAACATAGGATCCAAGCTGGG
GCGAGAAAAACTGCGCATCTACGGCTTTCGTGTGGCTGAACCGCATCATGACGGTACACCGCACTGGCACTTGTTGTTAT
TCATGAAGCCGCAAGAACGCCACGCCATCACTGAGATTATGCGCGCCTATGCCGTTAAAACTGATCGCGCCGAATTAGGT
AAGCGCACCAGCGCCCGGTTTACTGCTAAACGGCTGGATCCGAAGAAAGGCAGCGCCACCGCCTATATCGCTAAATACAT
CAGTAAAAATATTGACGGTTACGCGCTGGATGGCGAACTAGACCATGAAACCGGCAAGCCGCTGAAAGAGACGGCCCGCT
TCGCTATGGCTTGGGCGTCACGCCACCGTATCCGACAATATCAGCCAATCGGCACACCACCGGTAACCGTCTGGCGGGAG
CTGCGCAAGCTGAGCAATCAACTGGTCACTACGCTCAAGATTTCCGGCATCTATCAGCGCGGCAAGCCGTTATTGGTCGA
TCCGGCAATGGATGCCGTCACCGCCGCCGCAGATGCGGGCTGCTTTGCTACCTACATCATGAAGCAAGGCGGCGTGCTGA
TCCCACGTGAGGATTACACCGTGCGCATTGCCTATCAGGATAATGAACAGCCCAACGCCTACGGCGAAATCACCGAGAAG
ATTTTCGGCATCTATTCCCCGCTTTTGGGTGAGGCGTCGCGCATCTGTACTCGCCTAAAAACTTGGAAAATTGTCGCCCG
CCAAAAGGTGAAGCCCGCCGTTGTCGTGGGGTTTGATGTTTTTCAGGACGGCCCCGCCGTCCCTTGGAGTTCTGTCAATA
ACTCTCCGGTAGAGCAAAAAACACGCGAACCGGATGAGGCCATAGACAGAACATTAGAAGAAAAAATAATCGATTTCACC
GCGATCACCGATGCAGAACGTCGGGCCTTGCTGCGCAGGATAAAAAGCGCGCCGGTACTAACGATTAAAACCAACGCATT
GACGCCAGCCGAAGAATTATCACGCCAGGCATCAGCCGAAAAAGCCGCCCAGCGGCGAGAAAAAACCGCACGACTGGCAC
CAGTGGCAACAAAAATCCGCGATTTTGCCGAGTCAATCGGGCTTTCCATTAGCGAACAACAAGCGCAATCACTGGCTTGC
GGCGCAACATTGACCATCGGCGGTCAGAACTGGCGGGCAAGAGAGGATTGTTGTTTGTACCAGTGCCAACCAACCACCGC
CCAACGGGCATTTAGCGTAATGAGCCGGGTGGCAAAATTGCGAGAGGGAGTAAACCGTGAAAGTCACCAACATTAA

Upstream 100 bases:

>100_bases
CCTACGGAAACGCCATCAATGCTTCGACGGCGGAAGCGTCCATAAGGGCGTACTTAGCCACGCCACTGTGGATAGGTATT
GATCTGGCTGGTATTGCTGA

Downstream 100 bases:

>100_bases
TTACACCGACACCATTTGTATATTGTCAGCCGATGAGCAGCGAGTCGCTCAAATGCTTGGCGATGCATGGAATCAATATT
TACAGCTTTCAATTGAGCAT

Product: replication gene A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 851; Mature: 850

Protein sequence:

>851_residues
MTTHARGRITPTPPLPYPGSGDVSIKWDHPWNAPRPAIGGHQSLVPAAVVAKPKSHPLVIRYVKRLNALGYTELREPNLT
LLKIRKERAALERQIYLRDKQQWADSPQGVETRIDQQPIFIKSHFQNKIRWLRENHGDKHTNAFLTGTGKNALLRLDAVR
QYQGVSQGRISELMAYFQGIYSHLAELNKRRVKSLANEVAGRINEMFCTEVSTPTEETRILSDAELLTIYRNIALEVWSL
RVRPPHWRELGPKPGQPDEPVDRTIYYSAIARLINPDWWESKLWRLRNDWRESQLRAAGLIHKRAAPYVSKEALADWIEQ
KRRNREFFKRHELIDDEGNTVSLEAMVDASISNPTIRRHELMARMQGIELVAQSRGDVGVFYTITCPSKYHANNQSGHAN
PKWNHSTPPQAQAYLTKLWANIGSKLGREKLRIYGFRVAEPHHDGTPHWHLLLFMKPQERHAITEIMRAYAVKTDRAELG
KRTSARFTAKRLDPKKGSATAYIAKYISKNIDGYALDGELDHETGKPLKETARFAMAWASRHRIRQYQPIGTPPVTVWRE
LRKLSNQLVTTLKISGIYQRGKPLLVDPAMDAVTAAADAGCFATYIMKQGGVLIPREDYTVRIAYQDNEQPNAYGEITEK
IFGIYSPLLGEASRICTRLKTWKIVARQKVKPAVVVGFDVFQDGPAVPWSSVNNSPVEQKTREPDEAIDRTLEEKIIDFT
AITDAERRALLRRIKSAPVLTIKTNALTPAEELSRQASAEKAAQRREKTARLAPVATKIRDFAESIGLSISEQQAQSLAC
GATLTIGGQNWRAREDCCLYQCQPTTAQRAFSVMSRVAKLREGVNRESHQH

Sequences:

>Translated_851_residues
MTTHARGRITPTPPLPYPGSGDVSIKWDHPWNAPRPAIGGHQSLVPAAVVAKPKSHPLVIRYVKRLNALGYTELREPNLT
LLKIRKERAALERQIYLRDKQQWADSPQGVETRIDQQPIFIKSHFQNKIRWLRENHGDKHTNAFLTGTGKNALLRLDAVR
QYQGVSQGRISELMAYFQGIYSHLAELNKRRVKSLANEVAGRINEMFCTEVSTPTEETRILSDAELLTIYRNIALEVWSL
RVRPPHWRELGPKPGQPDEPVDRTIYYSAIARLINPDWWESKLWRLRNDWRESQLRAAGLIHKRAAPYVSKEALADWIEQ
KRRNREFFKRHELIDDEGNTVSLEAMVDASISNPTIRRHELMARMQGIELVAQSRGDVGVFYTITCPSKYHANNQSGHAN
PKWNHSTPPQAQAYLTKLWANIGSKLGREKLRIYGFRVAEPHHDGTPHWHLLLFMKPQERHAITEIMRAYAVKTDRAELG
KRTSARFTAKRLDPKKGSATAYIAKYISKNIDGYALDGELDHETGKPLKETARFAMAWASRHRIRQYQPIGTPPVTVWRE
LRKLSNQLVTTLKISGIYQRGKPLLVDPAMDAVTAAADAGCFATYIMKQGGVLIPREDYTVRIAYQDNEQPNAYGEITEK
IFGIYSPLLGEASRICTRLKTWKIVARQKVKPAVVVGFDVFQDGPAVPWSSVNNSPVEQKTREPDEAIDRTLEEKIIDFT
AITDAERRALLRRIKSAPVLTIKTNALTPAEELSRQASAEKAAQRREKTARLAPVATKIRDFAESIGLSISEQQAQSLAC
GATLTIGGQNWRAREDCCLYQCQPTTAQRAFSVMSRVAKLREGVNRESHQH
>Mature_850_residues
TTHARGRITPTPPLPYPGSGDVSIKWDHPWNAPRPAIGGHQSLVPAAVVAKPKSHPLVIRYVKRLNALGYTELREPNLTL
LKIRKERAALERQIYLRDKQQWADSPQGVETRIDQQPIFIKSHFQNKIRWLRENHGDKHTNAFLTGTGKNALLRLDAVRQ
YQGVSQGRISELMAYFQGIYSHLAELNKRRVKSLANEVAGRINEMFCTEVSTPTEETRILSDAELLTIYRNIALEVWSLR
VRPPHWRELGPKPGQPDEPVDRTIYYSAIARLINPDWWESKLWRLRNDWRESQLRAAGLIHKRAAPYVSKEALADWIEQK
RRNREFFKRHELIDDEGNTVSLEAMVDASISNPTIRRHELMARMQGIELVAQSRGDVGVFYTITCPSKYHANNQSGHANP
KWNHSTPPQAQAYLTKLWANIGSKLGREKLRIYGFRVAEPHHDGTPHWHLLLFMKPQERHAITEIMRAYAVKTDRAELGK
RTSARFTAKRLDPKKGSATAYIAKYISKNIDGYALDGELDHETGKPLKETARFAMAWASRHRIRQYQPIGTPPVTVWREL
RKLSNQLVTTLKISGIYQRGKPLLVDPAMDAVTAAADAGCFATYIMKQGGVLIPREDYTVRIAYQDNEQPNAYGEITEKI
FGIYSPLLGEASRICTRLKTWKIVARQKVKPAVVVGFDVFQDGPAVPWSSVNNSPVEQKTREPDEAIDRTLEEKIIDFTA
ITDAERRALLRRIKSAPVLTIKTNALTPAEELSRQASAEKAAQRREKTARLAPVATKIRDFAESIGLSISEQQAQSLACG
ATLTIGGQNWRAREDCCLYQCQPTTAQRAFSVMSRVAKLREGVNRESHQH

Specific function: Possible endonuclease which induces a single-strand cut and initiates DNA replication (Potential) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phage GPA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020220
- InterPro:   IPR008766
- ProDom:   PD092055 [H]

Pfam domain/function: PF05840 Phage_GPA [H]

EC number: NA

Molecular weight: Translated: 96584; Mature: 96453

Theoretical pI: Translated: 10.24; Mature: 10.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTHARGRITPTPPLPYPGSGDVSIKWDHPWNAPRPAIGGHQSLVPAAVVAKPKSHPLVI
CCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCHHCCHHHHCCCCCCCHHH
RYVKRLNALGYTELREPNLTLLKIRKERAALERQIYLRDKQQWADSPQGVETRIDQQPIF
HHHHHHHHCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHCHHHHCCCCCCHHHHCCCCCEE
IKSHFQNKIRWLRENHGDKHTNAFLTGTGKNALLRLDAVRQYQGVSQGRISELMAYFQGI
HHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEHHHHHHHCCCCCHHHHHHHHHHHHH
YSHLAELNKRRVKSLANEVAGRINEMFCTEVSTPTEETRILSDAELLTIYRNIALEVWSL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHHEEE
RVRPPHWRELGPKPGQPDEPVDRTIYYSAIARLINPDWWESKLWRLRNDWRESQLRAAGL
ECCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
IHKRAAPYVSKEALADWIEQKRRNREFFKRHELIDDEGNTVSLEAMVDASISNPTIRRHE
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCHHHHH
LMARMQGIELVAQSRGDVGVFYTITCPSKYHANNQSGHANPKWNHSTPPQAQAYLTKLWA
HHHHHHHHHHHHHCCCCEEEEEEEECCCHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
NIGSKLGREKLRIYGFRVAEPHHDGTPHWHLLLFMKPQERHAITEIMRAYAVKTDRAELG
HHHHHHCHHHEEEEEEEECCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHCCCCHHHHC
KRTSARFTAKRLDPKKGSATAYIAKYISKNIDGYALDGELDHETGKPLKETARFAMAWAS
CCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHH
RHRIRQYQPIGTPPVTVWRELRKLSNQLVTTLKISGIYQRGKPLLVDPAMDAVTAAADAG
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHEEEHHHHCCCCEEECCHHHHHHHHHCCH
CFATYIMKQGGVLIPREDYTVRIAYQDNEQPNAYGEITEKIFGIYSPLLGEASRICTRLK
HHHHHHHHCCCEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TWKIVARQKVKPAVVVGFDVFQDGPAVPWSSVNNSPVEQKTREPDEAIDRTLEEKIIDFT
HHHHHHHHCCCCEEEEEEHHHCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHH
AITDAERRALLRRIKSAPVLTIKTNALTPAEELSRQASAEKAAQRREKTARLAPVATKIR
HHCCHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DFAESIGLSISEQQAQSLACGATLTIGGQNWRAREDCCLYQCQPTTAQRAFSVMSRVAKL
HHHHHHCCCCCHHHHHHHHCCCEEEECCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHH
REGVNRESHQH
HHCCCCCCCCC
>Mature Secondary Structure 
TTHARGRITPTPPLPYPGSGDVSIKWDHPWNAPRPAIGGHQSLVPAAVVAKPKSHPLVI
CCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCHHCCHHHHCCCCCCCHHH
RYVKRLNALGYTELREPNLTLLKIRKERAALERQIYLRDKQQWADSPQGVETRIDQQPIF
HHHHHHHHCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHCHHHHCCCCCCHHHHCCCCCEE
IKSHFQNKIRWLRENHGDKHTNAFLTGTGKNALLRLDAVRQYQGVSQGRISELMAYFQGI
HHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEHHHHHHHCCCCCHHHHHHHHHHHHH
YSHLAELNKRRVKSLANEVAGRINEMFCTEVSTPTEETRILSDAELLTIYRNIALEVWSL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHHEEE
RVRPPHWRELGPKPGQPDEPVDRTIYYSAIARLINPDWWESKLWRLRNDWRESQLRAAGL
ECCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
IHKRAAPYVSKEALADWIEQKRRNREFFKRHELIDDEGNTVSLEAMVDASISNPTIRRHE
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCHHHHH
LMARMQGIELVAQSRGDVGVFYTITCPSKYHANNQSGHANPKWNHSTPPQAQAYLTKLWA
HHHHHHHHHHHHHCCCCEEEEEEEECCCHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
NIGSKLGREKLRIYGFRVAEPHHDGTPHWHLLLFMKPQERHAITEIMRAYAVKTDRAELG
HHHHHHCHHHEEEEEEEECCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHCCCCHHHHC
KRTSARFTAKRLDPKKGSATAYIAKYISKNIDGYALDGELDHETGKPLKETARFAMAWAS
CCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHH
RHRIRQYQPIGTPPVTVWRELRKLSNQLVTTLKISGIYQRGKPLLVDPAMDAVTAAADAG
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHEEEHHHHCCCCEEECCHHHHHHHHHCCH
CFATYIMKQGGVLIPREDYTVRIAYQDNEQPNAYGEITEKIFGIYSPLLGEASRICTRLK
HHHHHHHHCCCEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TWKIVARQKVKPAVVVGFDVFQDGPAVPWSSVNNSPVEQKTREPDEAIDRTLEEKIIDFT
HHHHHHHHCCCCEEEEEEHHHCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHH
AITDAERRALLRRIKSAPVLTIKTNALTPAEELSRQASAEKAAQRREKTARLAPVATKIR
HHCCHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DFAESIGLSISEQQAQSLACGATLTIGGQNWRAREDCCLYQCQPTTAQRAFSVMSRVAKL
HHHHHHCCCCCHHHHHHHHCCCEEEECCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHH
REGVNRESHQH
HHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]