Definition Yersinia pseudotuberculosis YPIII chromosome, complete genome.
Accession NC_010465
Length 4,689,441

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The map label for this gene is 170024478

Identifier: 170024478

GI number: 170024478

Start: 2495835

End: 2497244

Strand: Reverse

Name: 170024478

Synonym: YPK_2249

Alternate gene names: NA

Gene position: 2497244-2495835 (Counterclockwise)

Preceding gene: 170024479

Following gene: 170024477

Centisome position: 53.25

GC content: 49.15

Gene sequence:

>1410_bases
ATGAGTTATTTTTTCATATCCGTACTACAAGCCTTTTTACCTGTGGCTCTGTTATTGGGGCTGAACTGGGTTGTTCGGCC
AGCACCAGTACTGAATCGGATAGTGTGGATAACCATACTGATGGCCATCGTTGGCATCTGGATGGGTAATTATTATCCAA
AATCGCAACAGTGGCAGTTGGCATTGGCGGGGATTCAACTCCTTTCACTACTGTTATTCTTATGTAGCCAATTTATATGT
CGGGTGTCATTAGGCTATTTCTGGCAAGCATTATTGGTCTTTGGTGCGGCATTGAATTGGGGCAACAACCCCAATCTAGG
GGCGCTCACTAATACCCATGTTATTAATACTGATTTATTGCTCAATCTGGCTGCCACCGTGGTGGCATTTGGCTGGGTTA
TATTCTGCGCCGTATTATTATTGATGATGGTACGACAGTTGCCACGTTGTCGCGGACCCTTGCTGGTCGCACTCACCCTG
CTATTGATCTTGCCTATCAGCGGGGATGTCTTCCTGCTGCTTATGAAGTTACACGTGGTGCCGCTAACCAAATCACTCCT
TAGCTACGTGGCTCTGGTGACCAACGGGCATGCATGGCTTAACTATATTTGTGCCTTATTATTAGCATTCACGGTGCTGT
GCTATTTGTGGCCGTGGAGCCGGTCCCGCCATGTGGTCAGCCAAACGTCAGAAGCCATTGCCAAACGTAAAGCGCTGGCA
GCGTACCGCAATGTCCGGCGAATTTTGTTTTTATCGTTGCTGGCATTGGTGGTGGTCGCTGCGGCTCAGTTTTATTGGGA
TAAAGTGGCCTCGCAACCTCCTCAGTTATCAGAAGCATTGCCCGTGACACTGTCGTCTGATGGGTTGGTCCATATCCCGG
TTGAGCAAGTCCGAGATGGCAAACTACACCGCTTTGTCTGGATCGCTGATGACGGCAAAGCCGTTCGCTTCTTTATTATC
AACCGCTATCCAGACCGACTGCGCCTGAGTGTGGTCTTCGACGCTTGCCTATTGTGCGGCGACCAAGGTTATGTCATGGA
AGGTAATCAGGTCATTTGTGTTGCTTGCGCGGTACATATCTTCATTCCCTCCATCGGTAAAGCCGGTGGTTGTAACCCGA
TACCTCTGGAAAATTGGCAGAGTGATGATAACGAGTTGATTATTCCCAGAGCGTCTTTGGCGGCGGGCGTCAATTACTTT
ACGACGGTGGTCACACTGGATGTCGTTGATCCGGTTGATAAGAGCCATCTGACCAATCAAAAATCCGAGTATAAATACAG
CTATGGCGGGAAAACCTATTTCTTCTCCTCCGAGGCGAATTACAACCGTTTCCGCGATCACCCAGAACAGTTTGTCACGC
CGGTAGCCGGCGAAGGTGATGCCAGCGATGATAGACAGGAGAACCCATAA

Upstream 100 bases:

>100_bases
GGTCAGTTTAACCATTACTCTCAATTCCATTTAAATAATCAGTCTATGCTATGCAGTGATAACTGGCAGGTGCTGTGACT
TCCTCGCCCAAGGGATGCCA

Downstream 100 bases:

>100_bases
TTATGTTATGGCTGATGCTGAAGCAATCGTGGTTTAGAAACGTTCGGCGTAAATCGCTGGCGGTATTTACGGTGTTTCTT
GCCGCCGGGCTTATCTCTTC

Product: YHS domain-containing protein

Products: NA

Alternate protein names: YHS Domain-Containing Protein; YHS Domain Protein

Number of amino acids: Translated: 469; Mature: 468

Protein sequence:

>469_residues
MSYFFISVLQAFLPVALLLGLNWVVRPAPVLNRIVWITILMAIVGIWMGNYYPKSQQWQLALAGIQLLSLLLFLCSQFIC
RVSLGYFWQALLVFGAALNWGNNPNLGALTNTHVINTDLLLNLAATVVAFGWVIFCAVLLLMMVRQLPRCRGPLLVALTL
LLILPISGDVFLLLMKLHVVPLTKSLLSYVALVTNGHAWLNYICALLLAFTVLCYLWPWSRSRHVVSQTSEAIAKRKALA
AYRNVRRILFLSLLALVVVAAAQFYWDKVASQPPQLSEALPVTLSSDGLVHIPVEQVRDGKLHRFVWIADDGKAVRFFII
NRYPDRLRLSVVFDACLLCGDQGYVMEGNQVICVACAVHIFIPSIGKAGGCNPIPLENWQSDDNELIIPRASLAAGVNYF
TTVVTLDVVDPVDKSHLTNQKSEYKYSYGGKTYFFSSEANYNRFRDHPEQFVTPVAGEGDASDDRQENP

Sequences:

>Translated_469_residues
MSYFFISVLQAFLPVALLLGLNWVVRPAPVLNRIVWITILMAIVGIWMGNYYPKSQQWQLALAGIQLLSLLLFLCSQFIC
RVSLGYFWQALLVFGAALNWGNNPNLGALTNTHVINTDLLLNLAATVVAFGWVIFCAVLLLMMVRQLPRCRGPLLVALTL
LLILPISGDVFLLLMKLHVVPLTKSLLSYVALVTNGHAWLNYICALLLAFTVLCYLWPWSRSRHVVSQTSEAIAKRKALA
AYRNVRRILFLSLLALVVVAAAQFYWDKVASQPPQLSEALPVTLSSDGLVHIPVEQVRDGKLHRFVWIADDGKAVRFFII
NRYPDRLRLSVVFDACLLCGDQGYVMEGNQVICVACAVHIFIPSIGKAGGCNPIPLENWQSDDNELIIPRASLAAGVNYF
TTVVTLDVVDPVDKSHLTNQKSEYKYSYGGKTYFFSSEANYNRFRDHPEQFVTPVAGEGDASDDRQENP
>Mature_468_residues
SYFFISVLQAFLPVALLLGLNWVVRPAPVLNRIVWITILMAIVGIWMGNYYPKSQQWQLALAGIQLLSLLLFLCSQFICR
VSLGYFWQALLVFGAALNWGNNPNLGALTNTHVINTDLLLNLAATVVAFGWVIFCAVLLLMMVRQLPRCRGPLLVALTLL
LILPISGDVFLLLMKLHVVPLTKSLLSYVALVTNGHAWLNYICALLLAFTVLCYLWPWSRSRHVVSQTSEAIAKRKALAA
YRNVRRILFLSLLALVVVAAAQFYWDKVASQPPQLSEALPVTLSSDGLVHIPVEQVRDGKLHRFVWIADDGKAVRFFIIN
RYPDRLRLSVVFDACLLCGDQGYVMEGNQVICVACAVHIFIPSIGKAGGCNPIPLENWQSDDNELIIPRASLAAGVNYFT
TVVTLDVVDPVDKSHLTNQKSEYKYSYGGKTYFFSSEANYNRFRDHPEQFVTPVAGEGDASDDRQENP

Specific function: Unknown

COG id: COG4393

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52347; Mature: 52216

Theoretical pI: Translated: 8.33; Mature: 8.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYFFISVLQAFLPVALLLGLNWVVRPAPVLNRIVWITILMAIVGIWMGNYYPKSQQWQL
CCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH
ALAGIQLLSLLLFLCSQFICRVSLGYFWQALLVFGAALNWGNNPNLGALTNTHVINTDLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECHHHH
LNLAATVVAFGWVIFCAVLLLMMVRQLPRCRGPLLVALTLLLILPISGDVFLLLMKLHVV
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHH
PLTKSLLSYVALVTNGHAWLNYICALLLAFTVLCYLWPWSRSRHVVSQTSEAIAKRKALA
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
AYRNVRRILFLSLLALVVVAAAQFYWDKVASQPPQLSEALPVTLSSDGLVHIPVEQVRDG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCEEECCHHHCCCC
KLHRFVWIADDGKAVRFFIINRYPDRLRLSVVFDACLLCGDQGYVMEGNQVICVACAVHI
CEEEEEEEECCCCEEEEEEEECCCCHHHHHHHHHHHHHCCCCCEEEECCCEEHHHHHHHH
FIPSIGKAGGCNPIPLENWQSDDNELIIPRASLAAGVNYFTTVVTLDVVDPVDKSHLTNQ
HHCCCCCCCCCCCCCCCCCCCCCCEEEEECHHHHHCHHHHHHHEEEECCCCCCHHHCCCC
KSEYKYSYGGKTYFFSSEANYNRFRDHPEQFVTPVAGEGDASDDRQENP
CCCCEEECCCEEEEECCCCCCHHHHCCHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SYFFISVLQAFLPVALLLGLNWVVRPAPVLNRIVWITILMAIVGIWMGNYYPKSQQWQL
CHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH
ALAGIQLLSLLLFLCSQFICRVSLGYFWQALLVFGAALNWGNNPNLGALTNTHVINTDLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECHHHH
LNLAATVVAFGWVIFCAVLLLMMVRQLPRCRGPLLVALTLLLILPISGDVFLLLMKLHVV
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHH
PLTKSLLSYVALVTNGHAWLNYICALLLAFTVLCYLWPWSRSRHVVSQTSEAIAKRKALA
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
AYRNVRRILFLSLLALVVVAAAQFYWDKVASQPPQLSEALPVTLSSDGLVHIPVEQVRDG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCEEECCHHHCCCC
KLHRFVWIADDGKAVRFFIINRYPDRLRLSVVFDACLLCGDQGYVMEGNQVICVACAVHI
CEEEEEEEECCCCEEEEEEEECCCCHHHHHHHHHHHHHCCCCCEEEECCCEEHHHHHHHH
FIPSIGKAGGCNPIPLENWQSDDNELIIPRASLAAGVNYFTTVVTLDVVDPVDKSHLTNQ
HHCCCCCCCCCCCCCCCCCCCCCCEEEEECHHHHHCHHHHHHHEEEECCCCCCHHHCCCC
KSEYKYSYGGKTYFFSSEANYNRFRDHPEQFVTPVAGEGDASDDRQENP
CCCCEEECCCEEEEECCCCCCHHHHCCHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA