| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is 170024420
Identifier: 170024420
GI number: 170024420
Start: 2427054
End: 2427749
Strand: Reverse
Name: 170024420
Synonym: YPK_2189
Alternate gene names: NA
Gene position: 2427749-2427054 (Counterclockwise)
Preceding gene: 170024421
Following gene: 170024416
Centisome position: 51.77
GC content: 41.95
Gene sequence:
>696_bases ATGAAAGCAAAATATATATTTCAGGTTGTACAGGATATGGTGATGATGATTATTCTGTTATCACTGATGGGGTTTCATCT GTGGGGAGAAAGTATCCATGAGTGGCTGGGTATCGCTTTCTTATTGATTGTCTTGCTCCATAACGGCCTGAACATTCACT GGATTAGAAAACTGGCTCAGGGAGAATATTCTGCTTTCCGCATTGTGCAAGTCACCGTAAATATCATACTGGCACTGTTA TTTTTGTTTGCCATTATCAGCGGGTTGATGCTTTCAAAGCACGTATTACCCGATCTGCCGATTCACCGTTCTTCTGATTT TGTCAGAAAGATCCATATGACCAGTGTTCATTGGGGGCAAATTTTCATTGCCGTACATTTGGGCATGCACTGGAAAATGC TGGCCAATTTTTTCTGTAAAATCTGGCGTATTTCGCCATTTTCTCTTCTGGCGACACGGCTGATGCCCGCTATTTTCTTC AGTATTGCGGTATACGGAGTGTCTGTTTTTATGGGGCGTGACTTGCTGCCCTATTTGCTTATTCAGGTAGATTTTGCATT TTTTGATTTTGAAGAATCCACGGCTTTTTTCTATTTTGATTTCTTCGCTATCACAATTTTCTTCGCTTATCTGACACGCG TTCTGTTGTGGTTATTCCTGTTGTGGGGTGAGAAAGGCAAACTGCGGGCGTGTTAG
Upstream 100 bases:
>100_bases TTGCTATCTCAAGAAATGATGTGACGGATGACGATACGCCAAAGGAAATTATCAACTGGTTAAACACATTACCGAACATG CCGTGATGGCAGGCTACTGA
Downstream 100 bases:
>100_bases CTGCCCTTGCTCACCCCAGTCACTGAGTTATCTAATTGACTGGGGATTGGATACCTCAGCTCTATTTCAGGCGCATCAGT TAATTGTCTGCCTGACCGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 231; Mature: 231
Protein sequence:
>231_residues MKAKYIFQVVQDMVMMIILLSLMGFHLWGESIHEWLGIAFLLIVLLHNGLNIHWIRKLAQGEYSAFRIVQVTVNIILALL FLFAIISGLMLSKHVLPDLPIHRSSDFVRKIHMTSVHWGQIFIAVHLGMHWKMLANFFCKIWRISPFSLLATRLMPAIFF SIAVYGVSVFMGRDLLPYLLIQVDFAFFDFEESTAFFYFDFFAITIFFAYLTRVLLWLFLLWGEKGKLRAC
Sequences:
>Translated_231_residues MKAKYIFQVVQDMVMMIILLSLMGFHLWGESIHEWLGIAFLLIVLLHNGLNIHWIRKLAQGEYSAFRIVQVTVNIILALL FLFAIISGLMLSKHVLPDLPIHRSSDFVRKIHMTSVHWGQIFIAVHLGMHWKMLANFFCKIWRISPFSLLATRLMPAIFF SIAVYGVSVFMGRDLLPYLLIQVDFAFFDFEESTAFFYFDFFAITIFFAYLTRVLLWLFLLWGEKGKLRAC >Mature_231_residues MKAKYIFQVVQDMVMMIILLSLMGFHLWGESIHEWLGIAFLLIVLLHNGLNIHWIRKLAQGEYSAFRIVQVTVNIILALL FLFAIISGLMLSKHVLPDLPIHRSSDFVRKIHMTSVHWGQIFIAVHLGMHWKMLANFFCKIWRISPFSLLATRLMPAIFF SIAVYGVSVFMGRDLLPYLLIQVDFAFFDFEESTAFFYFDFFAITIFFAYLTRVLLWLFLLWGEKGKLRAC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27008; Mature: 27008
Theoretical pI: Translated: 9.66; Mature: 9.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAKYIFQVVQDMVMMIILLSLMGFHLWGESIHEWLGIAFLLIVLLHNGLNIHWIRKLAQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHC GEYSAFRIVQVTVNIILALLFLFAIISGLMLSKHVLPDLPIHRSSDFVRKIHMTSVHWGQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH IFIAVHLGMHWKMLANFFCKIWRISPFSLLATRLMPAIFFSIAVYGVSVFMGRDLLPYLL HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH IQVDFAFFDFEESTAFFYFDFFAITIFFAYLTRVLLWLFLLWGEKGKLRAC HHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MKAKYIFQVVQDMVMMIILLSLMGFHLWGESIHEWLGIAFLLIVLLHNGLNIHWIRKLAQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHC GEYSAFRIVQVTVNIILALLFLFAIISGLMLSKHVLPDLPIHRSSDFVRKIHMTSVHWGQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH IFIAVHLGMHWKMLANFFCKIWRISPFSLLATRLMPAIFFSIAVYGVSVFMGRDLLPYLL HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH IQVDFAFFDFEESTAFFYFDFFAITIFFAYLTRVLLWLFLLWGEKGKLRAC HHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA