Definition Yersinia pseudotuberculosis YPIII chromosome, complete genome.
Accession NC_010465
Length 4,689,441

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The map label for this gene is 170024421

Identifier: 170024421

GI number: 170024421

Start: 2427764

End: 2428429

Strand: Reverse

Name: 170024421

Synonym: YPK_2190

Alternate gene names: NA

Gene position: 2428429-2427764 (Counterclockwise)

Preceding gene: 170024422

Following gene: 170024420

Centisome position: 51.79

GC content: 44.44

Gene sequence:

>666_bases
ATGAATAAATTACGGTTCACTTCACTGACAAAACATCTGATTTTATTTCTGGCGGTTGCTGTCAGCAGTTTGAGTTTGAT
AGCCGAGGCAGCAGACCTCAATGCCCGACGAGTCCTGATTGTCTATTTCTCTCAACCTGAGGATGTAAAATTAGAGGGTG
TTGATGGTGTATCGGGTGCGAGCATATTGCAAAAAAACGGTGAAGTTCTAGGAAGTACCCAGTATGTAGCACAGATTATC
CAGGAGGAAACTGGCGGCGATTTATTCCGCATTGAAACGGTTAAACCCTACCCGCGTCAACATGACCCCTTGCTGAAATA
TGCAGAGCAAGAAGTGAAAGAGGGAGGGCGACCCGAAATGAGAGAGAAAATACAAAACCTTGCGGATTATGACCAGATAT
TTATTGGCTACCCCATCTGGTGGTACAAAATGCCGATGGTGATGTATAGCTTCTTTGAACAGCATGATTTTAGTGGAAAA
ACCCTTATTCCTTTTACCACTCATGGCGGTAGTCGTTTCTCTGACTCTCTGCGTGAAATCAAACGCCTTCAACCCAACGC
ACAACTGGTCACTCAAGGCCTTGCTATCTCAAGAAATGATGTGACGGATGACGATACGCCAAAGGAAATTATCAACTGGT
TAAACACATTACCGAACATGCCGTGA

Upstream 100 bases:

>100_bases
TCACAGTCATTTCTGTGGCATCTGCACGGTACGGTTTATGGCTTAACAATGAAGAACGTTGTTAATTACGGATGACTCAC
TTTACCCCTTGGCGAGCGCT

Downstream 100 bases:

>100_bases
TGGCAGGCTACTGAATGAAAGCAAAATATATATTTCAGGTTGTACAGGATATGGTGATGATGATTATTCTGTTATCACTG
ATGGGGTTTCATCTGTGGGG

Product: flavodoxin

Products: NA

Alternate protein names: Twin-Arginine Translocation Pathway Signal; Flavodoxin Protein; Exported; Flavodoxin Family Protein; Aldo/Keto Reductase; Carboxymuconolactone Decarboxylase; Lipoprotein

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MNKLRFTSLTKHLILFLAVAVSSLSLIAEAADLNARRVLIVYFSQPEDVKLEGVDGVSGASILQKNGEVLGSTQYVAQII
QEETGGDLFRIETVKPYPRQHDPLLKYAEQEVKEGGRPEMREKIQNLADYDQIFIGYPIWWYKMPMVMYSFFEQHDFSGK
TLIPFTTHGGSRFSDSLREIKRLQPNAQLVTQGLAISRNDVTDDDTPKEIINWLNTLPNMP

Sequences:

>Translated_221_residues
MNKLRFTSLTKHLILFLAVAVSSLSLIAEAADLNARRVLIVYFSQPEDVKLEGVDGVSGASILQKNGEVLGSTQYVAQII
QEETGGDLFRIETVKPYPRQHDPLLKYAEQEVKEGGRPEMREKIQNLADYDQIFIGYPIWWYKMPMVMYSFFEQHDFSGK
TLIPFTTHGGSRFSDSLREIKRLQPNAQLVTQGLAISRNDVTDDDTPKEIINWLNTLPNMP
>Mature_221_residues
MNKLRFTSLTKHLILFLAVAVSSLSLIAEAADLNARRVLIVYFSQPEDVKLEGVDGVSGASILQKNGEVLGSTQYVAQII
QEETGGDLFRIETVKPYPRQHDPLLKYAEQEVKEGGRPEMREKIQNLADYDQIFIGYPIWWYKMPMVMYSFFEQHDFSGK
TLIPFTTHGGSRFSDSLREIKRLQPNAQLVTQGLAISRNDVTDDDTPKEIINWLNTLPNMP

Specific function: Unknown

COG id: COG0716

COG function: function code C; Flavodoxins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25122; Mature: 25122

Theoretical pI: Translated: 5.35; Mature: 5.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKLRFTSLTKHLILFLAVAVSSLSLIAEAADLNARRVLIVYFSQPEDVKLEGVDGVSGA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEECCCCCCHH
SILQKNGEVLGSTQYVAQIIQEETGGDLFRIETVKPYPRQHDPLLKYAEQEVKEGGRPEM
HHHHHCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCHHH
REKIQNLADYDQIFIGYPIWWYKMPMVMYSFFEQHDFSGKTLIPFTTHGGSRFSDSLREI
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHH
KRLQPNAQLVTQGLAISRNDVTDDDTPKEIINWLNTLPNMP
HHCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNKLRFTSLTKHLILFLAVAVSSLSLIAEAADLNARRVLIVYFSQPEDVKLEGVDGVSGA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEECCCCCCHH
SILQKNGEVLGSTQYVAQIIQEETGGDLFRIETVKPYPRQHDPLLKYAEQEVKEGGRPEM
HHHHHCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCHHH
REKIQNLADYDQIFIGYPIWWYKMPMVMYSFFEQHDFSGKTLIPFTTHGGSRFSDSLREI
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHH
KRLQPNAQLVTQGLAISRNDVTDDDTPKEIINWLNTLPNMP
HHCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA