| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is 170024421
Identifier: 170024421
GI number: 170024421
Start: 2427764
End: 2428429
Strand: Reverse
Name: 170024421
Synonym: YPK_2190
Alternate gene names: NA
Gene position: 2428429-2427764 (Counterclockwise)
Preceding gene: 170024422
Following gene: 170024420
Centisome position: 51.79
GC content: 44.44
Gene sequence:
>666_bases ATGAATAAATTACGGTTCACTTCACTGACAAAACATCTGATTTTATTTCTGGCGGTTGCTGTCAGCAGTTTGAGTTTGAT AGCCGAGGCAGCAGACCTCAATGCCCGACGAGTCCTGATTGTCTATTTCTCTCAACCTGAGGATGTAAAATTAGAGGGTG TTGATGGTGTATCGGGTGCGAGCATATTGCAAAAAAACGGTGAAGTTCTAGGAAGTACCCAGTATGTAGCACAGATTATC CAGGAGGAAACTGGCGGCGATTTATTCCGCATTGAAACGGTTAAACCCTACCCGCGTCAACATGACCCCTTGCTGAAATA TGCAGAGCAAGAAGTGAAAGAGGGAGGGCGACCCGAAATGAGAGAGAAAATACAAAACCTTGCGGATTATGACCAGATAT TTATTGGCTACCCCATCTGGTGGTACAAAATGCCGATGGTGATGTATAGCTTCTTTGAACAGCATGATTTTAGTGGAAAA ACCCTTATTCCTTTTACCACTCATGGCGGTAGTCGTTTCTCTGACTCTCTGCGTGAAATCAAACGCCTTCAACCCAACGC ACAACTGGTCACTCAAGGCCTTGCTATCTCAAGAAATGATGTGACGGATGACGATACGCCAAAGGAAATTATCAACTGGT TAAACACATTACCGAACATGCCGTGA
Upstream 100 bases:
>100_bases TCACAGTCATTTCTGTGGCATCTGCACGGTACGGTTTATGGCTTAACAATGAAGAACGTTGTTAATTACGGATGACTCAC TTTACCCCTTGGCGAGCGCT
Downstream 100 bases:
>100_bases TGGCAGGCTACTGAATGAAAGCAAAATATATATTTCAGGTTGTACAGGATATGGTGATGATGATTATTCTGTTATCACTG ATGGGGTTTCATCTGTGGGG
Product: flavodoxin
Products: NA
Alternate protein names: Twin-Arginine Translocation Pathway Signal; Flavodoxin Protein; Exported; Flavodoxin Family Protein; Aldo/Keto Reductase; Carboxymuconolactone Decarboxylase; Lipoprotein
Number of amino acids: Translated: 221; Mature: 221
Protein sequence:
>221_residues MNKLRFTSLTKHLILFLAVAVSSLSLIAEAADLNARRVLIVYFSQPEDVKLEGVDGVSGASILQKNGEVLGSTQYVAQII QEETGGDLFRIETVKPYPRQHDPLLKYAEQEVKEGGRPEMREKIQNLADYDQIFIGYPIWWYKMPMVMYSFFEQHDFSGK TLIPFTTHGGSRFSDSLREIKRLQPNAQLVTQGLAISRNDVTDDDTPKEIINWLNTLPNMP
Sequences:
>Translated_221_residues MNKLRFTSLTKHLILFLAVAVSSLSLIAEAADLNARRVLIVYFSQPEDVKLEGVDGVSGASILQKNGEVLGSTQYVAQII QEETGGDLFRIETVKPYPRQHDPLLKYAEQEVKEGGRPEMREKIQNLADYDQIFIGYPIWWYKMPMVMYSFFEQHDFSGK TLIPFTTHGGSRFSDSLREIKRLQPNAQLVTQGLAISRNDVTDDDTPKEIINWLNTLPNMP >Mature_221_residues MNKLRFTSLTKHLILFLAVAVSSLSLIAEAADLNARRVLIVYFSQPEDVKLEGVDGVSGASILQKNGEVLGSTQYVAQII QEETGGDLFRIETVKPYPRQHDPLLKYAEQEVKEGGRPEMREKIQNLADYDQIFIGYPIWWYKMPMVMYSFFEQHDFSGK TLIPFTTHGGSRFSDSLREIKRLQPNAQLVTQGLAISRNDVTDDDTPKEIINWLNTLPNMP
Specific function: Unknown
COG id: COG0716
COG function: function code C; Flavodoxins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25122; Mature: 25122
Theoretical pI: Translated: 5.35; Mature: 5.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKLRFTSLTKHLILFLAVAVSSLSLIAEAADLNARRVLIVYFSQPEDVKLEGVDGVSGA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEECCCCCCHH SILQKNGEVLGSTQYVAQIIQEETGGDLFRIETVKPYPRQHDPLLKYAEQEVKEGGRPEM HHHHHCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCHHH REKIQNLADYDQIFIGYPIWWYKMPMVMYSFFEQHDFSGKTLIPFTTHGGSRFSDSLREI HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHH KRLQPNAQLVTQGLAISRNDVTDDDTPKEIINWLNTLPNMP HHCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCC >Mature Secondary Structure MNKLRFTSLTKHLILFLAVAVSSLSLIAEAADLNARRVLIVYFSQPEDVKLEGVDGVSGA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEECCCCCCHH SILQKNGEVLGSTQYVAQIIQEETGGDLFRIETVKPYPRQHDPLLKYAEQEVKEGGRPEM HHHHHCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCHHH REKIQNLADYDQIFIGYPIWWYKMPMVMYSFFEQHDFSGKTLIPFTTHGGSRFSDSLREI HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHH KRLQPNAQLVTQGLAISRNDVTDDDTPKEIINWLNTLPNMP HHCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA