| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
Click here to switch to the map view.
The map label for this gene is ychH [H]
Identifier: 170024416
GI number: 170024416
Start: 2423418
End: 2423690
Strand: Reverse
Name: ychH [H]
Synonym: YPK_2185
Alternate gene names: 170024416
Gene position: 2423690-2423418 (Counterclockwise)
Preceding gene: 170024420
Following gene: 170024411
Centisome position: 51.68
GC content: 46.52
Gene sequence:
>273_bases ATGAAACGTAAGAGCGCAACAGTACTGGGTAATATGCTGATGGGGTTGGGTTTAGCCACAATGGTTGTTGGAGTAGGTTA TTCAATATTAACCGAAATCTCCGAACTTGGTTTACCTCAATTCTTTGCCCACGGTGCCATCATGAGTATCTTTGTCGGTG CATTGCTGTGGTTAGCCGGTGCGCGTATCGGTGGTCGAGAAGCCGTTGCTGATCGCTATTGGTGGGTTAAGCACTTTGAT AAGCGTTGTACCAAGAATCAACGTCACTCATAG
Upstream 100 bases:
>100_bases CTGAATCATTAAGTGCACACGAATAATCGTATTATGCAAGCAGTTTAAAACAGCGAGTTTAGTAGGGTTATTGACTGGCG GCTTGAAGTGGAGGTGACAT
Downstream 100 bases:
>100_bases GGATGGATAATTGGTTGAATCTTCAAAAACAGAAAACCCGTTGTCGCACAGGCTTCAACGGGTTTTTCTTTATCTGCTTC AATTAAGCCACTGATCAATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 90; Mature: 90
Protein sequence:
>90_residues MKRKSATVLGNMLMGLGLATMVVGVGYSILTEISELGLPQFFAHGAIMSIFVGALLWLAGARIGGREAVADRYWWVKHFD KRCTKNQRHS
Sequences:
>Translated_90_residues MKRKSATVLGNMLMGLGLATMVVGVGYSILTEISELGLPQFFAHGAIMSIFVGALLWLAGARIGGREAVADRYWWVKHFD KRCTKNQRHS >Mature_90_residues MKRKSATVLGNMLMGLGLATMVVGVGYSILTEISELGLPQFFAHGAIMSIFVGALLWLAGARIGGREAVADRYWWVKHFD KRCTKNQRHS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787456, Length=92, Percent_Identity=68.4782608695652, Blast_Score=117, Evalue=1e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019698 [H]
Pfam domain/function: PF10762 DUF2583 [H]
EC number: NA
Molecular weight: Translated: 9938; Mature: 9938
Theoretical pI: Translated: 10.73; Mature: 10.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 5.6 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRKSATVLGNMLMGLGLATMVVGVGYSILTEISELGLPQFFAHGAIMSIFVGALLWLAG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHC ARIGGREAVADRYWWVKHFDKRCTKNQRHS CCCCCHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MKRKSATVLGNMLMGLGLATMVVGVGYSILTEISELGLPQFFAHGAIMSIFVGALLWLAG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHC ARIGGREAVADRYWWVKHFDKRCTKNQRHS CCCCCHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]