Definition Yersinia pseudotuberculosis YPIII chromosome, complete genome.
Accession NC_010465
Length 4,689,441

Click here to switch to the map view.

The map label for this gene is 170023880

Identifier: 170023880

GI number: 170023880

Start: 1816779

End: 1817894

Strand: Direct

Name: 170023880

Synonym: YPK_1639

Alternate gene names: NA

Gene position: 1816779-1817894 (Clockwise)

Preceding gene: 170023879

Following gene: 170023881

Centisome position: 38.74

GC content: 43.01

Gene sequence:

>1116_bases
ATGAAACATAAAAAATATTTACCCCTGTTTCTGATGGCAGGTATCTGTTCTGTTGCTCAAGCGGATAATTCTCCGGATGT
GGTAAGCGCTAATAACATGGATAACCGGACTTTTTTTGCCGGTGACAAAATCAGAATAGTAAAAGATGGCGGTGAGACGA
TAGAAGCTGTCGTAGAACTCAGCGATGATAATATTGGGATTGTGCGCATCCCTAAGGATGAAAAAGCCTATTTCCATGGC
AACTGGTTGGCAGAATATAAAATAGAACATTTCCGCAATGAGGGGCGCAGTACTAACTCTCGGCCAGTGCATGAAATTGT
CTTTGCTGATGGGCGCGTCAATTTTGGCGATACGGGCTGGAATACCGGTTTTTTACTCAAGCAAGTACGGTTTACCAGTG
ACTCACGTAATGAGAGCAATCATAAAGTTGATTTCCGCATGGTAGAAATGGAAATCCGCCCTGCCTGGTCGAAAAGTATC
GACAAGCACTGGTTTATGTTCGAAGGGATCTATTTAGGTAAAACAGGCTACGAAAAAAACCGCACGACAGGCGGCGATAA
CAATATTGGCGGCGATGGTTATGGTTTTCGGCCCTATTACCGCTACCAGGTATCAGATCGCTTAAGTGTCAATACTGATG
TAAAAATGCTGGTAGAAGATAAAGATGCCCGTGGTGCAGATAATGGGCGGTTCCAGTTCTACGAAGCACTTGTTAATGTA
AATTATCGGGTCGCCGATAATGTGCACGCCGGTATCGAGGTGTTCCGTAAAGAAGGCCAGGACTTTAATCATAATGGCAC
CAAAACAGCAAACGTCTTGGAACAGGAACTTCGCCCTTGGGTTGCCTGGAACATGGGTAAAAATAACTTCCTGTTTAAAA
TGGAACCACAATTAAGACGTATCGGCGGGCAAGATGGTTATAGAGAAACCTCGAAAGCTCAAAAATATATTTTTAACTAT
AGCTATCCTATCGCCGATAGAGTCTATTTGGTTGCCGAATATTTCTACCGGGTAGAGCATGACAAAAAATTCTGGGATCG
TGGCGTACGCGACAATAAAAGCTACAGTGATACCACCACGCATTTTGGCAAGTTAGGAATTAATTATATTTTTTAA

Upstream 100 bases:

>100_bases
TTTTTAACTCGATTTATAGAAAAAACCTAATATCAATTAGATTGGGTGGAGTTCCCATTATTTATCGATTGGGAATACCA
CCTACTTACATGGAATGCAT

Downstream 100 bases:

>100_bases
GCGGCTATAAATAACTAACTTAGAATAAGAGAAATAATATGAAACTACTAAATACCCTGGTTTGTATCATTGGTTTAACA
TCATTTTCTTCCTCTGCGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 371; Mature: 371

Protein sequence:

>371_residues
MKHKKYLPLFLMAGICSVAQADNSPDVVSANNMDNRTFFAGDKIRIVKDGGETIEAVVELSDDNIGIVRIPKDEKAYFHG
NWLAEYKIEHFRNEGRSTNSRPVHEIVFADGRVNFGDTGWNTGFLLKQVRFTSDSRNESNHKVDFRMVEMEIRPAWSKSI
DKHWFMFEGIYLGKTGYEKNRTTGGDNNIGGDGYGFRPYYRYQVSDRLSVNTDVKMLVEDKDARGADNGRFQFYEALVNV
NYRVADNVHAGIEVFRKEGQDFNHNGTKTANVLEQELRPWVAWNMGKNNFLFKMEPQLRRIGGQDGYRETSKAQKYIFNY
SYPIADRVYLVAEYFYRVEHDKKFWDRGVRDNKSYSDTTTHFGKLGINYIF

Sequences:

>Translated_371_residues
MKHKKYLPLFLMAGICSVAQADNSPDVVSANNMDNRTFFAGDKIRIVKDGGETIEAVVELSDDNIGIVRIPKDEKAYFHG
NWLAEYKIEHFRNEGRSTNSRPVHEIVFADGRVNFGDTGWNTGFLLKQVRFTSDSRNESNHKVDFRMVEMEIRPAWSKSI
DKHWFMFEGIYLGKTGYEKNRTTGGDNNIGGDGYGFRPYYRYQVSDRLSVNTDVKMLVEDKDARGADNGRFQFYEALVNV
NYRVADNVHAGIEVFRKEGQDFNHNGTKTANVLEQELRPWVAWNMGKNNFLFKMEPQLRRIGGQDGYRETSKAQKYIFNY
SYPIADRVYLVAEYFYRVEHDKKFWDRGVRDNKSYSDTTTHFGKLGINYIF
>Mature_371_residues
MKHKKYLPLFLMAGICSVAQADNSPDVVSANNMDNRTFFAGDKIRIVKDGGETIEAVVELSDDNIGIVRIPKDEKAYFHG
NWLAEYKIEHFRNEGRSTNSRPVHEIVFADGRVNFGDTGWNTGFLLKQVRFTSDSRNESNHKVDFRMVEMEIRPAWSKSI
DKHWFMFEGIYLGKTGYEKNRTTGGDNNIGGDGYGFRPYYRYQVSDRLSVNTDVKMLVEDKDARGADNGRFQFYEALVNV
NYRVADNVHAGIEVFRKEGQDFNHNGTKTANVLEQELRPWVAWNMGKNNFLFKMEPQLRRIGGQDGYRETSKAQKYIFNY
SYPIADRVYLVAEYFYRVEHDKKFWDRGVRDNKSYSDTTTHFGKLGINYIF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43046; Mature: 43046

Theoretical pI: Translated: 8.68; Mature: 8.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHKKYLPLFLMAGICSVAQADNSPDVVSANNMDNRTFFAGDKIRIVKDGGETIEAVVEL
CCCCCCCHHHHHHHHHHHHHCCCCCCEEECCCCCCCEEEECCEEEEEECCCCEEEEEEEE
SDDNIGIVRIPKDEKAYFHGNWLAEYKIEHFRNEGRSTNSRPVHEIVFADGRVNFGDTGW
CCCCEEEEEECCCCCEEEECCCCEEHHHHHHHCCCCCCCCCCCEEEEEECCEEECCCCCC
NTGFLLKQVRFTSDSRNESNHKVDFRMVEMEIRPAWSKSIDKHWFMFEGIYLGKTGYEKN
CCCCEEEEEEECCCCCCCCCCEEEEEEEEEEECCCHHCCCCCCEEEEEEEEECCCCCCCC
RTTGGDNNIGGDGYGFRPYYRYQVSDRLSVNTDVKMLVEDKDARGADNGRFQFYEALVNV
CCCCCCCCCCCCCCCCCCEEEEEECCCEECCCCEEEEEECCCCCCCCCCCHHEEEHHHCC
NYRVADNVHAGIEVFRKEGQDFNHNGTKTANVLEQELRPWVAWNMGKNNFLFKMEPQLRR
CEEEECCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCEEEEECHHHHH
IGGQDGYRETSKAQKYIFNYSYPIADRVYLVAEYFYRVEHDKKFWDRGVRDNKSYSDTTT
CCCCCCCCHHHHHHHEEEECCCCHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCHHH
HFGKLGINYIF
HHHHCCEEECC
>Mature Secondary Structure
MKHKKYLPLFLMAGICSVAQADNSPDVVSANNMDNRTFFAGDKIRIVKDGGETIEAVVEL
CCCCCCCHHHHHHHHHHHHHCCCCCCEEECCCCCCCEEEECCEEEEEECCCCEEEEEEEE
SDDNIGIVRIPKDEKAYFHGNWLAEYKIEHFRNEGRSTNSRPVHEIVFADGRVNFGDTGW
CCCCEEEEEECCCCCEEEECCCCEEHHHHHHHCCCCCCCCCCCEEEEEECCEEECCCCCC
NTGFLLKQVRFTSDSRNESNHKVDFRMVEMEIRPAWSKSIDKHWFMFEGIYLGKTGYEKN
CCCCEEEEEEECCCCCCCCCCEEEEEEEEEEECCCHHCCCCCCEEEEEEEEECCCCCCCC
RTTGGDNNIGGDGYGFRPYYRYQVSDRLSVNTDVKMLVEDKDARGADNGRFQFYEALVNV
CCCCCCCCCCCCCCCCCCEEEEEECCCEECCCCEEEEEECCCCCCCCCCCHHEEEHHHCC
NYRVADNVHAGIEVFRKEGQDFNHNGTKTANVLEQELRPWVAWNMGKNNFLFKMEPQLRR
CEEEECCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCEEEEECHHHHH
IGGQDGYRETSKAQKYIFNYSYPIADRVYLVAEYFYRVEHDKKFWDRGVRDNKSYSDTTT
CCCCCCCCHHHHHHHEEEECCCCHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCHHH
HFGKLGINYIF
HHHHCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA