| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is 170023881
Identifier: 170023881
GI number: 170023881
Start: 1817933
End: 1819207
Strand: Direct
Name: 170023881
Synonym: YPK_1640
Alternate gene names: NA
Gene position: 1817933-1819207 (Clockwise)
Preceding gene: 170023880
Following gene: 170023883
Centisome position: 38.77
GC content: 45.96
Gene sequence:
>1275_bases ATGAAACTACTAAATACCCTGGTTTGTATCATTGGTTTAACATCATTTTCTTCCTCTGCGAAGCTGGTTAATGCTGAGCA TCTGGATGCCTTATATCAAAAGGTCACGGTGGCGAACAAAACAGAACTGGGTCTGATTCATATCTATAGCGAATTTCCAG ATTACCGCTGGGTTAAAGATCCCATCGAAGGTGTATCCGCCATTGATGATGTCGCCCGCGCGGCAATTTTTTATCAACGT CAATACCAGGCAACAGGCTCAGCGGCAGATTTAGAAAAAGTAAAATCGCTGGTCGAATTTATTCTGTATCAACGGGCAGA TAATGGTTACTTCTATAATTTTATCTACCCTGATCATTCCATTAATAAAGAGTATAAAACCAGTGTGGCGGAGCCAAATT GGTGGACATGGCGTGCATTATGGGCGCTGACTCAGGTTTATCCTACGCTGGTGAAAACCGATAACGCGTTGGCGCAAAGA ACCCGCGAGACTATTTTCGCCACCATCGATGTTATTTATAAAGACTTTAATTTCAAACAGACTCGTGGCGAAAAAGAGGG CGTGGCGGTGCCAGAGTGGCTGCCTCATACCGCTGGTGACCAAGCTTCTGTATTGTTGATGGCCCTGAGCGATGCACAGG CGCTGGAAGCAAAACCAGAAATTGAAAAGATGATGCGTTCACTGGCGGCTGGCATCATGCTGATGCAGGTTAAGGATACA TCTTCACCGGTGAATGGCGCTTTTTTAAGCTGGCAAAACCTGTGGCATGGCTATGGTAACAGCCAGGCTTACGCTTTGTT GGTTGCGGGTAACCGGCTGGGCGATAGGGATATGATTAAAGCTGCCTTTAACGAGCTGGATCATTTCCATCCTTGGTTGA TCAGTAATGGGTTGTTAAATGAGTTTACCGTTCGGCAGCAGGGTGAAAAAGTCACGCTGATTGAACAGAAGAAGTTTTCC CAGATTGCTTACATCATCCGCCCGATGGTATTTGCCAATATCAAAGCTTGGGAGATTTCGCGTGACGCCGTTTATCTGGA GCGCGCGGTGGATTTATCGCTGTGGTTCTTTAAAAATAATCCGGCACAGGCACAAATGTATTACCCCGTAACCGGGATCG CATTTGATGGTATTGATTCGGCCACTACCGTGAATAAAAACTCGGGAGCAGAATCCACGATTGAAGCGTTGCTCACTCTT CAGTTGATTGAATCTATCCCTGATGCCAAGCGCATGTTGGAATCGGCACTTGAAAAGCGGAATATCAAACAGTGA
Upstream 100 bases:
>100_bases ATAAAAGCTACAGTGATACCACCACGCATTTTGGCAAGTTAGGAATTAATTATATTTTTTAAGCGGCTATAAATAACTAA CTTAGAATAAGAGAAATAAT
Downstream 100 bases:
>100_bases TAACCGCATCATCCTGTAAATAGTAGCCCCGGTGCTCTGAATTATTTTTATATTTCAGAGCACCATTAGTACACCAGCCA TATTCTATTTATATTTATCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 424; Mature: 424
Protein sequence:
>424_residues MKLLNTLVCIIGLTSFSSSAKLVNAEHLDALYQKVTVANKTELGLIHIYSEFPDYRWVKDPIEGVSAIDDVARAAIFYQR QYQATGSAADLEKVKSLVEFILYQRADNGYFYNFIYPDHSINKEYKTSVAEPNWWTWRALWALTQVYPTLVKTDNALAQR TRETIFATIDVIYKDFNFKQTRGEKEGVAVPEWLPHTAGDQASVLLMALSDAQALEAKPEIEKMMRSLAAGIMLMQVKDT SSPVNGAFLSWQNLWHGYGNSQAYALLVAGNRLGDRDMIKAAFNELDHFHPWLISNGLLNEFTVRQQGEKVTLIEQKKFS QIAYIIRPMVFANIKAWEISRDAVYLERAVDLSLWFFKNNPAQAQMYYPVTGIAFDGIDSATTVNKNSGAESTIEALLTL QLIESIPDAKRMLESALEKRNIKQ
Sequences:
>Translated_424_residues MKLLNTLVCIIGLTSFSSSAKLVNAEHLDALYQKVTVANKTELGLIHIYSEFPDYRWVKDPIEGVSAIDDVARAAIFYQR QYQATGSAADLEKVKSLVEFILYQRADNGYFYNFIYPDHSINKEYKTSVAEPNWWTWRALWALTQVYPTLVKTDNALAQR TRETIFATIDVIYKDFNFKQTRGEKEGVAVPEWLPHTAGDQASVLLMALSDAQALEAKPEIEKMMRSLAAGIMLMQVKDT SSPVNGAFLSWQNLWHGYGNSQAYALLVAGNRLGDRDMIKAAFNELDHFHPWLISNGLLNEFTVRQQGEKVTLIEQKKFS QIAYIIRPMVFANIKAWEISRDAVYLERAVDLSLWFFKNNPAQAQMYYPVTGIAFDGIDSATTVNKNSGAESTIEALLTL QLIESIPDAKRMLESALEKRNIKQ >Mature_424_residues MKLLNTLVCIIGLTSFSSSAKLVNAEHLDALYQKVTVANKTELGLIHIYSEFPDYRWVKDPIEGVSAIDDVARAAIFYQR QYQATGSAADLEKVKSLVEFILYQRADNGYFYNFIYPDHSINKEYKTSVAEPNWWTWRALWALTQVYPTLVKTDNALAQR TRETIFATIDVIYKDFNFKQTRGEKEGVAVPEWLPHTAGDQASVLLMALSDAQALEAKPEIEKMMRSLAAGIMLMQVKDT SSPVNGAFLSWQNLWHGYGNSQAYALLVAGNRLGDRDMIKAAFNELDHFHPWLISNGLLNEFTVRQQGEKVTLIEQKKFS QIAYIIRPMVFANIKAWEISRDAVYLERAVDLSLWFFKNNPAQAQMYYPVTGIAFDGIDSATTVNKNSGAESTIEALLTL QLIESIPDAKRMLESALEKRNIKQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48020; Mature: 48020
Theoretical pI: Translated: 6.19; Mature: 6.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLLNTLVCIIGLTSFSSSAKLVNAEHLDALYQKVTVANKTELGLIHIYSEFPDYRWVKD CCHHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHH PIEGVSAIDDVARAAIFYQRQYQATGSAADLEKVKSLVEFILYQRADNGYFYNFIYPDHS HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCC INKEYKTSVAEPNWWTWRALWALTQVYPTLVKTDNALAQRTRETIFATIDVIYKDFNFKQ CCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHH TRGEKEGVAVPEWLPHTAGDQASVLLMALSDAQALEAKPEIEKMMRSLAAGIMLMQVKDT CCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHCCCHHHHHHHHHHHCCEEEEEEECC SSPVNGAFLSWQNLWHGYGNSQAYALLVAGNRLGDRDMIKAAFNELDHFHPWLISNGLLN CCCCCCHHEEHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCHHHCCCCHH EFTVRQQGEKVTLIEQKKFSQIAYIIRPMVFANIKAWEISRDAVYLERAVDLSLWFFKNN HHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHEEEEEEEECC PAQAQMYYPVTGIAFDGIDSATTVNKNSGAESTIEALLTLQLIESIPDAKRMLESALEKR CCCEEEEECEEEEEECCCCCCCEECCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHC NIKQ CCCC >Mature Secondary Structure MKLLNTLVCIIGLTSFSSSAKLVNAEHLDALYQKVTVANKTELGLIHIYSEFPDYRWVKD CCHHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHH PIEGVSAIDDVARAAIFYQRQYQATGSAADLEKVKSLVEFILYQRADNGYFYNFIYPDHS HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCC INKEYKTSVAEPNWWTWRALWALTQVYPTLVKTDNALAQRTRETIFATIDVIYKDFNFKQ CCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHH TRGEKEGVAVPEWLPHTAGDQASVLLMALSDAQALEAKPEIEKMMRSLAAGIMLMQVKDT CCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHCCCHHHHHHHHHHHCCEEEEEEECC SSPVNGAFLSWQNLWHGYGNSQAYALLVAGNRLGDRDMIKAAFNELDHFHPWLISNGLLN CCCCCCHHEEHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCHHHCCCCHH EFTVRQQGEKVTLIEQKKFSQIAYIIRPMVFANIKAWEISRDAVYLERAVDLSLWFFKNN HHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHEEEEEEEECC PAQAQMYYPVTGIAFDGIDSATTVNKNSGAESTIEALLTLQLIESIPDAKRMLESALEKR CCCEEEEECEEEEEECCCCCCCEECCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHC NIKQ CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA