Definition Yersinia pseudotuberculosis YPIII chromosome, complete genome.
Accession NC_010465
Length 4,689,441

Click here to switch to the map view.

The map label for this gene is 170023709

Identifier: 170023709

GI number: 170023709

Start: 1621532

End: 1622233

Strand: Reverse

Name: 170023709

Synonym: YPK_1468

Alternate gene names: NA

Gene position: 1622233-1621532 (Counterclockwise)

Preceding gene: 170023710

Following gene: 170023708

Centisome position: 34.59

GC content: 46.01

Gene sequence:

>702_bases
GTGAGCAGCGCAGATATTTTTAAAAAGATTTTAAGTATTGACACCTTATTATCATTCGATGGTGTTATCCCTTCTTTATC
CGAGTTTCAGCTAAAGCTGGTCACCCTGATTGAACAGTTTGGCCACGCGCTGCAATCCGAGGGACATAACGAAACTGAAG
TTGATCGTTTATGTCATCAGATTTGTCACTCGCTTGATAAACGTGCGGGAAGTGCAATTAAAGAGAACGGATTGAGTTGG
GAAGGCTATTCATTAGTGCATTACTTCTACGGCTACATCGCGCCTGTCCCTAGCGAAAGCGAAAGTTTAGAAGCGCTATT
AAACAGTGACGATGCCACAGTCAGTCAATTCGCACTCAAGATACTTGCCCTCTCGCAGAGTTTACCGATCCACGATGAAA
AATCATTGCAGCTACTGGCGCGCTATAGCCATAGATCCTTGCGCCAAAATATAATCGCCACTGACGATGATATCGACCCA
GAGGAGTGGCTGGGTTCAGCGCTAAAGAGGGAAGAAACCATTGAGGCAGAACAAGTGCCTGAGGCCAATATCGTATCTGA
GGCCAATATAGCACTTGAGGCCAATATCGTATCTGAGCAACGCCGCTCTTCGCGCCCTTTTTATCTGCAACTTATCACGC
TGACGCTATTGCTCTCTACGCTCTGGTTCTGGTGCTCTCGCTATTTAGGTGATCTGTCTTAA

Upstream 100 bases:

>100_bases
AATTGGCCTTTAATACTCAAACCCATCCGAATGCACAAACAATTAGAATATGTCCTTACATGCGAACGCAGGGGTGGGGA
GATGTCGTGGAGAAACCCTG

Downstream 100 bases:

>100_bases
ATGTTTAAGGTTAAATTGAATAAAACGCTCTCTCTATTATGGCTGGCTGCGGTCGGCACCCTATTGGTGAGTGTGAATTT
TAAGGGAAATGCGTTATGGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 233; Mature: 232

Protein sequence:

>233_residues
MSSADIFKKILSIDTLLSFDGVIPSLSEFQLKLVTLIEQFGHALQSEGHNETEVDRLCHQICHSLDKRAGSAIKENGLSW
EGYSLVHYFYGYIAPVPSESESLEALLNSDDATVSQFALKILALSQSLPIHDEKSLQLLARYSHRSLRQNIIATDDDIDP
EEWLGSALKREETIEAEQVPEANIVSEANIALEANIVSEQRRSSRPFYLQLITLTLLLSTLWFWCSRYLGDLS

Sequences:

>Translated_233_residues
MSSADIFKKILSIDTLLSFDGVIPSLSEFQLKLVTLIEQFGHALQSEGHNETEVDRLCHQICHSLDKRAGSAIKENGLSW
EGYSLVHYFYGYIAPVPSESESLEALLNSDDATVSQFALKILALSQSLPIHDEKSLQLLARYSHRSLRQNIIATDDDIDP
EEWLGSALKREETIEAEQVPEANIVSEANIALEANIVSEQRRSSRPFYLQLITLTLLLSTLWFWCSRYLGDLS
>Mature_232_residues
SSADIFKKILSIDTLLSFDGVIPSLSEFQLKLVTLIEQFGHALQSEGHNETEVDRLCHQICHSLDKRAGSAIKENGLSWE
GYSLVHYFYGYIAPVPSESESLEALLNSDDATVSQFALKILALSQSLPIHDEKSLQLLARYSHRSLRQNIIATDDDIDPE
EWLGSALKREETIEAEQVPEANIVSEANIALEANIVSEQRRSSRPFYLQLITLTLLLSTLWFWCSRYLGDLS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26213; Mature: 26082

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSADIFKKILSIDTLLSFDGVIPSLSEFQLKLVTLIEQFGHALQSEGHNETEVDRLCHQ
CCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
ICHSLDKRAGSAIKENGLSWEGYSLVHYFYGYIAPVPSESESLEALLNSDDATVSQFALK
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHH
ILALSQSLPIHDEKSLQLLARYSHRSLRQNIIATDDDIDPEEWLGSALKREETIEAEQVP
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
EANIVSEANIALEANIVSEQRRSSRPFYLQLITLTLLLSTLWFWCSRYLGDLS
CCHHHHHCCHHEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SSADIFKKILSIDTLLSFDGVIPSLSEFQLKLVTLIEQFGHALQSEGHNETEVDRLCHQ
CHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
ICHSLDKRAGSAIKENGLSWEGYSLVHYFYGYIAPVPSESESLEALLNSDDATVSQFALK
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHH
ILALSQSLPIHDEKSLQLLARYSHRSLRQNIIATDDDIDPEEWLGSALKREETIEAEQVP
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
EANIVSEANIALEANIVSEQRRSSRPFYLQLITLTLLLSTLWFWCSRYLGDLS
CCHHHHHCCHHEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA