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The map label for this gene is yiaD [C]

Identifier: 170023708

GI number: 170023708

Start: 1619849

End: 1621531

Strand: Reverse

Name: yiaD [C]

Synonym: YPK_1467

Alternate gene names: 170023708

Gene position: 1621531-1619849 (Counterclockwise)

Preceding gene: 170023709

Following gene: 170023707

Centisome position: 34.58

GC content: 45.81

Gene sequence:

>1683_bases
ATGTTTAAGGTTAAATTGAATAAAACGCTCTCTCTATTATGGCTGGCTGCGGTCGGCACCCTATTGGTGAGTGTGAATTT
TAAGGGAAATGCGTTATGGAATAACGTTATTTTCATTACTTTCCTGGCGCTGATGGTTCTTGCCATCTGGAAACATTACG
CCCTCAAACCCAAACACCCCCAAGTGCCGATTCCCGTCCCGCAGGAGACAGCGGAACCGGTAGAACAGGAAAGTACGGTT
ATTTTAATTCTCGGTCCCTATGCTGAGAAATGGTTTAGTAACCCAGAATCGCCAGACAGTACACGTTTTTCCAGCCATGC
GGTCTGGATATTAATCACGAATCCCGCCGCGCTGCAAAAACGCCTCACATATATTGCTGAACATCATCCATCCGCTCAGG
TATTGACCTTTTTCCCTTTCTTGCCGGATGTCTATGAGAATGCAGCAGTGATGATGTCAAAACTCACGGTGTGGCAGAAC
ACGTTTTCAACGTTATCACTGCGATCCCCCCTCCCCTGCGTATTTGCTATTTATGCGCAGTTGAGTAATGAACGCCTTAG
CCATAATTCTGATAACGCATATTGGACTGGAAATATTAATCTTGCGAACCAGCAGCCTATCGAAATTACGCAAGCCCTAC
AGTCACTGAGCCAAAGACTTGAGTTACAAGATATCAATCACTCAGGATTTGCAACTCAGCGTAATGTTATGGCCCATAAT
TTATTTACCTGGTTGAATGAATCGGGGGTGACAAACCTTCTGCAATCTATTTTCTCGCGCACCCCCTTACGGCTAACAGA
CGTCATTTTGTCGGATAATGGCAAAGGGTTCATCAGGCATGGTGCCTGGTCAGCCTGGCTGGAGAAAAAGTTTGGCATCA
TACCGAGCTTAGCCTCAACCTTGTCACTGCCACCTTTCCCTGCGGTGATCAATGACCAGAAGCCCGCAATAAAACCACGG
GTGAAAACACCGGTGATAAAACCTATCCCCGCATCCCGTGGGTGGTTATGGAGTGTGTGCTTCGCCGCGGTGCTATTAGC
CTCACATATGCTAAACACCCTGTGGCAAGAAAAAAACCGGCATGCGCAATTTAACCAACAGATGGTGCCGTTGGACAATA
TCAACGATTTTTCTGCTCAGTACCTGGCACGCAGCATCACCCAGTTAACCGATGAAGGTAAAACATTAACCACATGCGTT
AATACATTTGATGTGACACGTTGGGGGCTGTCTCAATGTCAGACGTTATTAAGCCAAATCAACCGCCGGATTGAATCCTA
TGAAAATATTCCTGTTTTCAGTTTTGCCCAAAAGCTCCCTCTGTTTGACTCAAACAGTACCAAGCTGAAACTGAACTCAC
AAACCAATGAAATGATGATGGAGTTGTTATCACTGGTCGAACAGAATAAAGGGAAAAAAATCTTAATTGTTGGCCATTCT
GATAACACGGGCAGTTCCTCCATGAACATGACACTTTCCGAACAGCGTGCGCTGGCCCTTCGCGATTGGTTAATTAAACG
CAGTGATATCACTGTCGATAATTTTATTACCAAGGGAATGGGGGCTTCAGAACCGGTTGCGACCAATCACACGGAAGCGG
GTCGAGAACAAAACAGACGCGTCGAAGTACTGATATTACCCACACAAGATAGAACAAGAATGACGGAGCCTAAACCTTTA
TGA

Upstream 100 bases:

>100_bases
CCGCTCTTCGCGCCCTTTTTATCTGCAACTTATCACGCTGACGCTATTGCTCTCTACGCTCTGGTTCTGGTGCTCTCGCT
ATTTAGGTGATCTGTCTTAA

Downstream 100 bases:

>100_bases
ATGCTATACCTTCAACCTACTCAATTTTTGAGGGCACATTTCTAACACCCGCCCCAGTGTTGGATCGATCGGTGAATATT
TTAATGTTCAGAGATCCCGA

Product: OmpA/MotB domain-containing protein

Products: NA

Alternate protein names: Outer Membrane Protein; OmpA/MotB Domain Protein; OmpA Family Protein; OmpA/MotB; Ompa/Motb Domain Protein; Outer Membrane Lipoprotein; OmpA Domain Protein; OmpA Family Membrane Protein; Inner Membrane Lipoprotein YiaD; OmpA Domain-Containing Protein; Thrombospondin Type 3 RepeatOmpA/MotB; Outer Membrane Protein OmpA; Outer Membrane Protein A; Outer Membrane Porin F; OmpA Family Outer Membrane Protein; OmpA Family Domain-Containing Protein; OmpA Family Outer Membrane Lipoprotein; Surface Antigen Protein; T6ss O; Ompa Domain Protein; Type VI Secretion System OmpA/MotB; OmpA Family Outer Membrane Protein P; OmpA/MotB Family Protein; OmpA/MotB Family Outer Membrane Protein; OmpA Family Peptidoglycan-Associated Lipoprotein; Lipoprotein

Number of amino acids: Translated: 560; Mature: 560

Protein sequence:

>560_residues
MFKVKLNKTLSLLWLAAVGTLLVSVNFKGNALWNNVIFITFLALMVLAIWKHYALKPKHPQVPIPVPQETAEPVEQESTV
ILILGPYAEKWFSNPESPDSTRFSSHAVWILITNPAALQKRLTYIAEHHPSAQVLTFFPFLPDVYENAAVMMSKLTVWQN
TFSTLSLRSPLPCVFAIYAQLSNERLSHNSDNAYWTGNINLANQQPIEITQALQSLSQRLELQDINHSGFATQRNVMAHN
LFTWLNESGVTNLLQSIFSRTPLRLTDVILSDNGKGFIRHGAWSAWLEKKFGIIPSLASTLSLPPFPAVINDQKPAIKPR
VKTPVIKPIPASRGWLWSVCFAAVLLASHMLNTLWQEKNRHAQFNQQMVPLDNINDFSAQYLARSITQLTDEGKTLTTCV
NTFDVTRWGLSQCQTLLSQINRRIESYENIPVFSFAQKLPLFDSNSTKLKLNSQTNEMMMELLSLVEQNKGKKILIVGHS
DNTGSSSMNMTLSEQRALALRDWLIKRSDITVDNFITKGMGASEPVATNHTEAGREQNRRVEVLILPTQDRTRMTEPKPL

Sequences:

>Translated_560_residues
MFKVKLNKTLSLLWLAAVGTLLVSVNFKGNALWNNVIFITFLALMVLAIWKHYALKPKHPQVPIPVPQETAEPVEQESTV
ILILGPYAEKWFSNPESPDSTRFSSHAVWILITNPAALQKRLTYIAEHHPSAQVLTFFPFLPDVYENAAVMMSKLTVWQN
TFSTLSLRSPLPCVFAIYAQLSNERLSHNSDNAYWTGNINLANQQPIEITQALQSLSQRLELQDINHSGFATQRNVMAHN
LFTWLNESGVTNLLQSIFSRTPLRLTDVILSDNGKGFIRHGAWSAWLEKKFGIIPSLASTLSLPPFPAVINDQKPAIKPR
VKTPVIKPIPASRGWLWSVCFAAVLLASHMLNTLWQEKNRHAQFNQQMVPLDNINDFSAQYLARSITQLTDEGKTLTTCV
NTFDVTRWGLSQCQTLLSQINRRIESYENIPVFSFAQKLPLFDSNSTKLKLNSQTNEMMMELLSLVEQNKGKKILIVGHS
DNTGSSSMNMTLSEQRALALRDWLIKRSDITVDNFITKGMGASEPVATNHTEAGREQNRRVEVLILPTQDRTRMTEPKPL
>Mature_560_residues
MFKVKLNKTLSLLWLAAVGTLLVSVNFKGNALWNNVIFITFLALMVLAIWKHYALKPKHPQVPIPVPQETAEPVEQESTV
ILILGPYAEKWFSNPESPDSTRFSSHAVWILITNPAALQKRLTYIAEHHPSAQVLTFFPFLPDVYENAAVMMSKLTVWQN
TFSTLSLRSPLPCVFAIYAQLSNERLSHNSDNAYWTGNINLANQQPIEITQALQSLSQRLELQDINHSGFATQRNVMAHN
LFTWLNESGVTNLLQSIFSRTPLRLTDVILSDNGKGFIRHGAWSAWLEKKFGIIPSLASTLSLPPFPAVINDQKPAIKPR
VKTPVIKPIPASRGWLWSVCFAAVLLASHMLNTLWQEKNRHAQFNQQMVPLDNINDFSAQYLARSITQLTDEGKTLTTCV
NTFDVTRWGLSQCQTLLSQINRRIESYENIPVFSFAQKLPLFDSNSTKLKLNSQTNEMMMELLSLVEQNKGKKILIVGHS
DNTGSSSMNMTLSEQRALALRDWLIKRSDITVDNFITKGMGASEPVATNHTEAGREQNRRVEVLILPTQDRTRMTEPKPL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Attached To The Membrane By A Lipid Anchor [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI48994946, Length=106, Percent_Identity=35.8490566037736, Blast_Score=65, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 63185; Mature: 63185

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKVKLNKTLSLLWLAAVGTLLVSVNFKGNALWNNVIFITFLALMVLAIWKHYALKPKHP
CEEEEECCHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
QVPIPVPQETAEPVEQESTVILILGPYAEKWFSNPESPDSTRFSSHAVWILITNPAALQK
CCCCCCCCHHHCCCCCCCEEEEEECCCHHHHCCCCCCCCCCCCCCCEEEEEEECHHHHHH
RLTYIAEHHPSAQVLTFFPFLPDVYENAAVMMSKLTVWQNTFSTLSLRSPLPCVFAIYAQ
HHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHH
LSNERLSHNSDNAYWTGNINLANQQPIEITQALQSLSQRLELQDINHSGFATQRNVMAHN
HHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCHHCCCCCCCCHHHHHHHHH
LFTWLNESGVTNLLQSIFSRTPLRLTDVILSDNGKGFIRHGAWSAWLEKKFGIIPSLAST
HHHHHCCCCHHHHHHHHHCCCCCEEEEEEEECCCCEEEECCCHHHHHHHHCCCCHHHHHH
LSLPPFPAVINDQKPAIKPRVKTPVIKPIPASRGWLWSVCFAAVLLASHMLNTLWQEKNR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
HAQFNQQMVPLDNINDFSAQYLARSITQLTDEGKTLTTCVNTFDVTRWGLSQCQTLLSQI
CHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHH
NRRIESYENIPVFSFAQKLPLFDSNSTKLKLNSQTNEMMMELLSLVEQNKGKKILIVGHS
HHHHHHHCCCCHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHHHCCCCCEEEEEECC
DNTGSSSMNMTLSEQRALALRDWLIKRSDITVDNFITKGMGASEPVATNHTEAGREQNRR
CCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCCCHHHCCE
VEVLILPTQDRTRMTEPKPL
EEEEEECCCCCCCCCCCCCC
>Mature Secondary Structure
MFKVKLNKTLSLLWLAAVGTLLVSVNFKGNALWNNVIFITFLALMVLAIWKHYALKPKHP
CEEEEECCHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
QVPIPVPQETAEPVEQESTVILILGPYAEKWFSNPESPDSTRFSSHAVWILITNPAALQK
CCCCCCCCHHHCCCCCCCEEEEEECCCHHHHCCCCCCCCCCCCCCCEEEEEEECHHHHHH
RLTYIAEHHPSAQVLTFFPFLPDVYENAAVMMSKLTVWQNTFSTLSLRSPLPCVFAIYAQ
HHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHH
LSNERLSHNSDNAYWTGNINLANQQPIEITQALQSLSQRLELQDINHSGFATQRNVMAHN
HHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCHHCCCCCCCCHHHHHHHHH
LFTWLNESGVTNLLQSIFSRTPLRLTDVILSDNGKGFIRHGAWSAWLEKKFGIIPSLAST
HHHHHCCCCHHHHHHHHHCCCCCEEEEEEEECCCCEEEECCCHHHHHHHHCCCCHHHHHH
LSLPPFPAVINDQKPAIKPRVKTPVIKPIPASRGWLWSVCFAAVLLASHMLNTLWQEKNR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
HAQFNQQMVPLDNINDFSAQYLARSITQLTDEGKTLTTCVNTFDVTRWGLSQCQTLLSQI
CHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHH
NRRIESYENIPVFSFAQKLPLFDSNSTKLKLNSQTNEMMMELLSLVEQNKGKKILIVGHS
HHHHHHHCCCCHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHHHCCCCCEEEEEECC
DNTGSSSMNMTLSEQRALALRDWLIKRSDITVDNFITKGMGASEPVATNHTEAGREQNRR
CCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCCCHHHCCE
VEVLILPTQDRTRMTEPKPL
EEEEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA